DY259996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 4.472e-22 Identity = 56/151 (37.09%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 MGR +V++KRIENK +RQVTFSKRR+GL++KA ++S+LC++ +A++V S GKL++ ++ M +I++RYE + +L+A ++ T Y LK +E++Q + ++ + S+ L S+E+Q+++ L + R+RK +LM+ + Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYE--IHHADELEALDLAEK---TRNYLPLKELLEIVQSKLEE---SNVDNASVDTLISLEEQLETALSVTRARKTELMMGEV 143
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.628e-22 Identity = 58/151 (38.41%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 MGR ++++KRIENK +RQVTFSKRR+GL++KA ++SVLCDA VAL+V S GKL+ +S+ + +IL+RY + +A+ L+A + + L Y + E+L+ +G ++ ++S+ L +E+ +++ L + R++K +LML+ + Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQ-HAD-DLKALDHQSK---ALNYG---SHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLV 143
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.218e-19 Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWT----------------------LEYSKLKARMEVLQR---NQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 561 M R R +++RIE+ RQVTFSKRR GL KKA E++VLCDA+VAL+VFS+ GKL ++++ S M I+++Y + + L + +P+ + LE+SK + E L + GE+L LS++ELQ +E+ +++GL+ + K+Q +Q IS Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS-SNMNEIIDKYTTH---SKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEIS 173
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.543e-19 Identity = 53/151 (35.10%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKAR-------MEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRK 534 MGRG++++++IENK NRQVTFSKRR+G++KKA E++VLCDA+V+L++ S+ KL Y S ++++ + Y++ IE W ++ +++ + +L+R MG DL L+L EL +++Q+++ + IR++K Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQK------------IEGVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKK 139
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.297e-18 Identity = 48/128 (37.50%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 184 GLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSC-MERILERYERYCYAERQLQAN--EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 558 GLLKKA E+++LCDA++ +I+FS+ GK+FE+S+ M I++RY++ L N + N E +++K ++ LQ +HF GEDL L++ E+ +EQQ++ + +RSRK QL+ Q + Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK-------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQL 122
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.727e-18 Identity = 51/152 (33.55%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY--STDSCMERILERYERYCYAE-----RQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQ 540 MGRGR ++KRIEN RQ TF KRR GL KKA E++VLCDA++ L++FS GKL+ + T + +ERYE + + RQ + E+E K+ + ++L++ + +D + ++ L+++E +++ ++ +RS K++ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE----------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDR 142
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.789e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 324 MGR ++Q+ RI ++ NRQVTF+KR+ G++KKA+E+SVLCD E+ALI+FS+ KL++Y STD M+R+L +Y Y Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTD--MDRVLLKYTEY 72
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 324 MGR ++Q++RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F+ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 324 MGR ++Q++RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F+ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of DY259996 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 106 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERY 324 MGR ++Q++RI ++ NRQVTF+KR+ GL+KKA+E+SVLCD E+ALI+F+ KLF+Y STD M+++L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72 The following BLAST results are available for this feature:
BLAST of DY259996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259996 ID=DY259996; Name=DY259996; organism=Citrus clementina; type=EST; length=937bpback to top |