DY259997

Overview
NameDY259997
Unique NameDY259997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length972
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.462e-39
Identity = 85/185 (45.95%), Postives = 115/185 (62.16%), Query Frame = 2
Query:  122 FHEKELESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTR--GNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            + + +L S E L  L++ W   H+ +  S+DEK  RF +F+ N+M++ +TNK +  Y L LN FAD++N EF   Y G   +    F G     N  F Y  VT+ P S+DWR KG+VT VK+QG CGSCWAFSTIA VEGIN I+T  L+ LSEQELVDCD   + GC GG++  + ++    G
Sbjct:   33 YSQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAED---FTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYVANNG 213          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 5.555e-39
Identity = 81/187 (43.32%), Postives = 114/187 (60.96%), Query Frame = 2
Query:  143 SEEGLWDLYERWRSHHTVSRS-----LDEKHKRFNVFKQNVMHV--HQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS--IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKGWRN 676
            ++E +  +Y +W + H  + +     ++++ KRFN+FK N+  +  H  +  +  YKL L KF D+TN E+   Y G++ +  R     +         V    +P +VDWR+KG+V  +KDQG CGSCWAFST AAVEGIN I+T +L+SLSEQELVDCD   NQGCNGG  + AF+F  K G  N
Sbjct:   41 TDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLN 227          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.981e-37
Identity = 83/183 (45.36%), Postives = 114/183 (62.30%), Query Frame = 2
Query:  122 FHEKELESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            + + +L S E L  L+  W  +H+    ++DEK  RF +FK N+ ++ +TNK +  Y L LN+FAD++N EF   Y GS I    + Q    +  F+     ++P +VDWRKKG+VT V+ QG CGSCWAFS +A VEGIN I T KLV LSEQELVDC+  ++ GC GG+   A E+  K G
Sbjct:   33 YSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDA-TIEQSY--DEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCE-RRSHGCKGGYPPYALEYVAKNG 211          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.981e-37
Identity = 79/175 (45.14%), Postives = 110/175 (62.86%), Query Frame = 2
Query:  143 SEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKP----YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEF 652
            SEE    LY  W++ H  S  ++ E+ +R+  F+ N+ ++ + N         ++L LN+FAD+TN E+  TY G + K  R     + +  ++     ++P SVDWR KG+V  +KDQG CGSCWAFS IAAVEGIN I+T  L+SLSEQELVDCD   N+GCNGG  + AF+F
Sbjct:   32 SEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRE---RKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDF 203          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 5.748e-36
Identity = 79/183 (43.17%), Postives = 111/183 (60.66%), Query Frame = 2
Query:  122 FHEKELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            + + +L S E L  L+  W   H  + +++DEK  RF +FK N+ ++ + NKM   Y L LN+F+D++N EF   Y GS  +    +     +  F+   +  +P SVDWR KG+VT VK QG C SCWAFST+A VEGIN I T  LV LSEQELVDCD  Q+ GCN G++  + ++  + G
Sbjct:   33 YSQDDLTSTERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSLPED---YTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRGYQSTSLQYVAQNG 211          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.355e-35
Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 2
Query:  128 EKELE-SEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPD-QNQGCNGGHRELAFEFHQKKG 667
            E E+E +E  +  +YE+W   +  +   L EK +RF +FK N+  V + N + D+ +++ L +FAD+TN EF + Y   K++  +    T     ++Y +   +P  VDWR  G+V +VKDQG CGSCWAFS + AVEGIN I T +L+SLSEQELVDCD    N GC+GG    AFEF  K G
Sbjct:   30 ETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTE---RYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNG 210          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.380e-34
Identity = 77/176 (43.75%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  122 FHEKELESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKV-----TSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGH 631
            + + +L S E L  L+E W   H+ + +++DEK  RF +FK N+ ++ +TNK +  Y L LN FADM+N EF   Y GS         G        Y +V      +IP  VDWR+KG+VT VK+QG CGSCWAFS +  +EGI  I T  L   SEQEL+DCD  ++ GCNGG+
Sbjct:   33 YSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGS-------IAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCD-RRSYGCNGGY 200          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.325e-32
Identity = 88/194 (45.36%), Postives = 117/194 (60.31%), Query Frame = 2
Query:  107 VEGFDFHEKELESEEGLWDLYERWRSHHTVSRS--LDEKHKRFNVFKQNVMHVHQTN-KMDKP--YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTA-VKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPD-QNQGCNGGHRELAFEFHQKKG 667
            V G +  E E  +   LW L    R     SR+  + E  +RF VF  N+  V   N + D+   ++L +N+FAD+TN EF +TY G+        +G R    + +  V ++P SVDWR KG+V A VK+QGQCGSCWAFS +AAVEGIN I+T +LVSLSEQELV+C  + QN GCNGG  + AF F  + G
Sbjct:   48 VRGLERTEAEARAAYDLW-LARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAG----RGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNG 236          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 6.577e-32
Identity = 71/156 (45.51%), Postives = 102/156 (65.38%), Query Frame = 2
Query:  212 EKHKRFNVFKQNVMHVHQTN-KMDKP--YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPD-QNQGCNGGHRELAFEFHQKKG 667
            E  +RF VF  N+  V   N + D+   ++L +N+FAD+TN EF +T+ G+K+       G R    + +  V  +P SVDWR+KG+V  VK+QGQCGSCWAFS ++ VE IN ++T ++++LSEQELV+C  + QN GCNGG  + AF+F  K G
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGER----YRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNG 221          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.577e-32
Identity = 71/179 (39.66%), Postives = 106/179 (59.22%), Query Frame = 2
Query:  149 EGLWD-----LYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            +G++D     ++E W   H  V  S+ EK +R  +F+ N+  +   N  +  Y+L LN+FAD++ HE+     G+  +  R       +  +       +P SVDWR +G+VT VKDQG C SCWAFST+ AVEG+N I+T +LV+LSEQ+L++C+  +N GC GG  E A+EF    G
Sbjct:   45 QGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCN-KENNGCGGGKVETAYEFIMNNG 222          
The following BLAST results are available for this feature:
BLAST of DY259997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
PAPA2_CARPA1.462e-3945.95Chymopapain OS=Carica papaya PE=1 SV=2[more]
GCP1_ARATH5.555e-3943.32Germination-specific cysteine protease 1 OS=Arabid... [more]
PAPA3_CARPA3.981e-3745.36Caricain OS=Carica papaya PE=1 SV=2[more]
ORYA_ORYSJ3.981e-3745.14Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
PAPA4_CARPA5.748e-3643.17Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CPR1_ARATH6.355e-3544.02Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
PAPA1_CARPA5.380e-3443.75Papain OS=Carica papaya PE=1 SV=1[more]
CYSP1_ORYSJ1.325e-3245.36Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
ORYB_ORYSJ6.577e-3245.51Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CPR4_ARATH6.577e-3239.66Probable cysteine proteinase At4g11320 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YO05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259997 ID=DY259997; Name=DY259997; organism=Citrus clementina; type=EST; length=972bp
GTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAAAGGTTAAA
AAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTTTGGTTCTG
GGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAATCCGAGGA
AGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATACGGTTTCAA
GGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGCAAAATGTT
ATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAGTTGAAGCT
GAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCACATACGCTG
GATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTGGAAACGGG
ACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTCGATTGGAG
GAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATGCGGTAGCT
GCTGGGCTTTTTCCACAATTGCAGCAGTAGAGGGCATTAATCCCATTATG
ACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAATTAGTTGATTGTGACCC
CGATCAAAACCAAGGATGTAATGGAGGGCACAGGGAATTGGCATTTGAGT
TTCACCAGAAAAAAGGGTGGCGTAACCACAGAAGCCTACTACCCTCTCCC
ACGCCAAGGACGGAACATGTCGACGTTCCCAACGGGACATCCCCCCACCA
GTGTTCATTGACCGGAACTGAAATTGAACCCGCCCAATCCCCAGCTAGCT
CCGCCTTAGGTCTTTTCACAAATCCCTGGTGTTCTTACCCCTCCACGCCC
GCTATTTCAAATTTCCATTACTATATACAGCGTGCACTCTCGGAACACCA
ACGTCCCACCCTCTCATACGCTGTTCGACCATAGGGTCTAGAGTTTCACC
TACTCGCTACGCTATCCTCACC
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