DY259997

Overview
NameDY259997
Unique NameDY259997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length972
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.589e-32
Identity = 69/169 (40.83%), Postives = 101/169 (59.76%), Query Frame = 2
Query:  164 LYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            ++E W   H  V  S+ EK +R  +F+ N+  ++  N  +  Y+L L  FAD++ HE+     G+  +  R       +  +       +P SVDWR +G+VT VKDQG C SCWAFST+ AVEG+N I+T +LV+LSEQ+L++C+  +N GC GG  E A+EF  K G
Sbjct:   48 IFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCN-KENNGCGGGKLETAYEFIMKNG 215          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.465e-31
Identity = 72/172 (41.86%), Postives = 98/172 (56.98%), Query Frame = 2
Query:  143 SEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTN-KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCD-PDQNQGCNGGHRELAFEF 652
            SE      +  W        S  E   R+++FK N+ +V   N K D    L LN FAD+TN E+  TY G+++  H  + G  G        + + P S+DWR K +VT +KDQGQCGSCW+FST  + EG + + T KLVSLSEQ LVDC  P++N GC+GG    AF++
Sbjct:   28 SESQYRTAFTEWTLKFNRQYSSSEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHS-YNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAFDY 198          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.264e-31
Identity = 78/180 (43.33%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  164 LYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNK-MDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQN-QGCNGGHRELAFEFHQKKGWRNHRSLLP 694
            +YE W   +  S  SL E  +RF +FK+ +  + + N   ++ YK+ LN+FAD+T+ EF STY G     ++     R       G+V  +PS VDWR  G+V  +K QG+CG CWAFS IA VEGIN I+T  L+SLSEQEL+DC   QN +GCNGG+    F+F    G  N     P
Sbjct:   41 MYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRV--GQV--LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYP 216          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.263e-31
Identity = 76/183 (41.53%), Postives = 110/183 (60.11%), Query Frame = 2
Query:  134 ELESEEG-LWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNK-MDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTA-VKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCD-PDQNQGCNGGHRELAFEFHQKKG 667
            E +  EG +  +YE+W   +  +   L EK +RF +FK N+  + + N   ++ Y+  LNKF+D+T  EF ++Y G K++   +         + Y +   +P  VDWR++G+V   VK QG+CGSCWAF+   AVEGIN I T +LVSLSEQEL+DCD  + N GC GG    AFEF ++ G
Sbjct:   29 ESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAE---RYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENG 208          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 134.806 bits (338), Expect = 7.271e-31
Identity = 81/199 (40.70%), Postives = 110/199 (55.28%), Query Frame = 2
Query:  164 LYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNK-MDKPYKLKLNKFADMTNHEFASTY-----AGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQN-QGCNGGHRELAFEFHQKKGWRNHRSLLPSPTPRTE-HVDVPN 733
            +YE W   +  S  SL E  +RF +FK+ +  + + N   ++ YK+ LN+FAD+T+ EF STY       +K K    ++   G           +PS VDWR  G+V  +K QG+CG CWAFS IA VEGIN I+T  L+SLSEQEL+DC   QN +GCNGG+    F+F    G  N     P      E +VD+ N
Sbjct:   41 MYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQ---------VLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQN 230          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.990e-29
Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 2
Query:  131 KELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEF 652
            K+  SE    + +  W   H  S + +E   R+N+FK N+ +V Q N       L LN FAD+TN E+ +TY G+K     +  GT+    F     TS  +S DWR +G+VT VK+QGQCG CW+FST  + EG +     +LVSLSEQ L+DC   +N GC+GG    AFE+
Sbjct:   18 KQQFSELQYRNAFTDWMITHQKSYTSEEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDASSLI-GTQEEKVF----TTSSAASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCS-TENSGCDGGLMTYAFEY 185          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.161e-28
Identity = 72/169 (42.60%), Postives = 95/169 (56.21%), Query Frame = 2
Query:  206 LDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQ--NQGCNGGHRELAFEFHQKKGWRNHRSLLP 694
            L+E+  R NVF  N+ ++ + NK     +  Y L +N+F+DMTN +F +   G K       +G R    F         + VDWR KG+VT VKDQGQCGSCWAFST   +EG + + T +LVSLSEQ+LVDC      NQGCNGG  E A  + +  G  +  S  P
Sbjct:   34 LEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYK-------KGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYP 195          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.161e-28
Identity = 69/173 (39.88%), Postives = 101/173 (58.38%), Query Frame = 2
Query:  140 ESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQ-TNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEF 652
            E  + +   +E W + +  V +  DEK  RF +FK NV H+    N+    Y L +N+F DMTN+EF + Y G  +  +   +      +F    ++S+P S+DWR  G+VT+VK+QG+CGSCWAF++IA VE I  I    LVSLSEQ+++DC    + GC GG    A+ F
Sbjct:   28 EPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVV---SFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC--AVSYGCKGGWINKAYSF 195          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.586e-28
Identity = 68/172 (39.53%), Postives = 100/172 (58.14%), Query Frame = 2
Query:  167 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQ-NQGCNGGHRELAFEFHQKKG 667
            + +W+S H      +E+  R  V+++N+    +H  + +     + +++N F DMTN EF     G + + H+  +       F    +  IP +VDWR+KG VT VK+QGQCGSCWAFS    +EG   + T KL+SLSEQ LVDC  DQ NQGCNGG  + AF++ ++ G
Sbjct:   29 WHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGR------LFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENG 194          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.586e-28
Identity = 70/170 (41.18%), Postives = 99/170 (58.24%), Query Frame = 2
Query:  173 RWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCD-PDQNQGCNGGHRELAFEFHQKKG 667
            +W++ H     ++E+  R  V+++N+    +H  + ++    + + +N F DMTN EF     G + + H+  +       F    V  +P SVDWR+KG VTAVK+QGQCGSCWAFS   A+EG     T KLVSLSEQ LVDC  P  NQGCNGG  + AF++ +  G
Sbjct:   31 KWKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGK------VFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNG 194          
The following BLAST results are available for this feature:
BLAST of DY259997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CPR3_ARATH8.589e-3240.83Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CYSP2_DICDI1.465e-3141.86Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
ACTN_ACTDE3.264e-3143.33Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CPR2_ARATH4.263e-3141.53Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
ACTN_ACTCH7.271e-3140.70Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CYSP5_DICDI3.990e-2941.38Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CYSP1_HOMAM1.161e-2842.60Digestive cysteine proteinase 1 OS=Homarus america... [more]
ANAN_ANACO1.161e-2839.88Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATL1_RAT2.586e-2839.53Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATL1_PIG2.586e-2841.18Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YO05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259997 ID=DY259997; Name=DY259997; organism=Citrus clementina; type=EST; length=972bp
GTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAAAGGTTAAA
AAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTTTGGTTCTG
GGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAATCCGAGGA
AGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATACGGTTTCAA
GGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGCAAAATGTT
ATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAGTTGAAGCT
GAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCACATACGCTG
GATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTGGAAACGGG
ACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTCGATTGGAG
GAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATGCGGTAGCT
GCTGGGCTTTTTCCACAATTGCAGCAGTAGAGGGCATTAATCCCATTATG
ACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAATTAGTTGATTGTGACCC
CGATCAAAACCAAGGATGTAATGGAGGGCACAGGGAATTGGCATTTGAGT
TTCACCAGAAAAAAGGGTGGCGTAACCACAGAAGCCTACTACCCTCTCCC
ACGCCAAGGACGGAACATGTCGACGTTCCCAACGGGACATCCCCCCACCA
GTGTTCATTGACCGGAACTGAAATTGAACCCGCCCAATCCCCAGCTAGCT
CCGCCTTAGGTCTTTTCACAAATCCCTGGTGTTCTTACCCCTCCACGCCC
GCTATTTCAAATTTCCATTACTATATACAGCGTGCACTCTCGGAACACCA
ACGTCCCACCCTCTCATACGCTGTTCGACCATAGGGTCTAGAGTTTCACC
TACTCGCTACGCTATCCTCACC
back to top