DY259997

Overview
NameDY259997
Unique NameDY259997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length972
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.624e-22
Identity = 69/184 (37.50%), Postives = 102/184 (55.43%), Query Frame = 2
Query:  128 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK--------PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEF 652
            E EL+++   WDL++R     T+ +++  +  R NV + ++    + ++  +         ++L +N   DMT+ E   T  G ++   R     R NGT      +S  P++VDWR+KG VT VKDQGQCGSCWAFS++ A+EG     T KL+SLS Q LV C    N GC GG+   AFE+
Sbjct:   24 EPELDAQ---WDLWKR-----TIQKAVQRQGGR-NVPEVDLGEEPEVHRCPQRGARLGKHSFQLAMNYLGDMTSEEVVRTMTGLRVPRSR----PRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC-VSNNNGCGGGYMTNAFEY 193          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.770e-22
Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 2
Query:  119 DFHEKELESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTN---KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            D    +  +++ +  L++ W+S H  V  + +E+ KR  +FK N  ++   N   K    ++L LNKFAD+T  EF+  Y  +     +  +                P+S DWRKKG +T VK QG CG  WAFS   A+E  + I T  LVSLSEQELVDC  ++++G   G +  +FE+  + G
Sbjct:   28 DLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHG 213          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.770e-22
Identity = 68/182 (37.36%), Postives = 99/182 (54.40%), Query Frame = 2
Query:  137 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQK 661
            L  EE L   +E W+  +    +  +DE  +R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+        +R N T ++       P S+D+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC   +N GC GG+   AF++ QK
Sbjct:   17 LYPEEILDTQWELWKKTYRKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQK 192          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.770e-22
Identity = 60/164 (36.59%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  167 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTA-VKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDC-DPDQNQGCNGGHRELAFEF 652
            ++ W   H  + S  E + R  +F  N   +   N+ +  +K+ LN+F+DM+  E    +  S+ ++    +     GT  Y      PSS+DWRKKG+V + VK+QG C SCW FST  A+E    I + K++SL+EQ+LVDC     N GC GG    AFE+
Sbjct:   33 FKSWMKQHQKTYSSVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSEPQNCSATKSNYLRGTGPY------PSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEY 190          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.617e-22
Identity = 54/151 (35.76%), Postives = 85/151 (56.29%), Query Frame = 2
Query:  215 KHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAG-SKIKHHRMFQGTRGNGTFMYGKVT-----SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFE 649
            K+ RF +FKQN+  +++ NK++      +NKF+D++ +E  + Y G +  K   M + T      ++          +P + DWR    +T+VKDQG CGSCWA + +  +E +  I  N L++LSEQ+L+DCD   N  C+GG    AFE
Sbjct:   49 KNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD-SANMACDGGLMHTAFE 198          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.724e-22
Identity = 59/172 (34.30%), Postives = 95/172 (55.23%), Query Frame = 2
Query:  158 WDLYERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQ---NQGCNGGHRELAFEF 652
            WDL+++  +H    +  +E+  R  ++++N+    +H  + +     Y++ +N   DMTN E +      +I        +    TF      ++P +VDWR+KG VT VK QG CG+CWAFS + A+EG   + T KL+SLS Q LVDC  ++   N+GC GG+   AF++
Sbjct:   36 WDLWKK--THEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISCRMGALRISRQ-----SPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQY 200          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.724e-22
Identity = 52/80 (65.00%), Postives = 59/80 (73.75%), Query Frame = 2
Query:  431 PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCD-PDQNQGCNGGHRELAFEFHQKKG 667
            P SVDWR+KG VT VKDQGQCGSCWAFST  A+EG +     KLVSLSEQ LVDC  P+ NQGCNGG  + AF++ Q  G
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNG 81          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.058e-22
Identity = 50/89 (56.18%), Postives = 60/89 (67.42%), Query Frame = 2
Query:  428 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKGWRNHRSLLP 694
            +P S+DWR+ G+V  VK+QG CGSCWAFST+AAVEGIN I+T  L+SLSEQ+LVDC    N GC GG    AF+F    G  N     P
Sbjct:    3 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDC-TTANHGCRGGWMNPAFQFIVNNGGINSEETYP 90          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.058e-22
Identity = 64/154 (41.56%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  212 EKHKRFNVFKQNVMHVHQTNKMDKPYKLK-LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK-VTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            E   RFN+FK N++         +   +  +  ++D+T  EFA T+  +      +   +R N     GK V +IP + DWR+KG+VT VK+QG CGSCWAFST   VE      T KL+SLSEQ+LVDCD   + GCNGG    A+E   K G
Sbjct:   35 EDEIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTASW----VVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYESIIKMG 183          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.052e-21
Identity = 63/158 (39.87%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  203 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI--PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDC-DPDQNQGCNGGHRELAFEFHQKKG 667
            S++E  +RF +F  N+  +   N+    YKL +N+F D+T  EF     G+          T+GN      K+T++  P + DWRK G V+ VK QG+CGSCW FST  A+E        K +SLSEQ+LVDC     N GCNGG    AFE+ +  G
Sbjct:   70 SVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGAS---QNCSATTKGNL-----KLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNG 219          
The following BLAST results are available for this feature:
BLAST of DY259997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATK_CHICK1.624e-2237.50Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
P34_SOYBN2.770e-2234.76P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CATK_PIG2.770e-2237.36Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATH_MOUSE2.770e-2236.59Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATV_NPVAH3.617e-2235.76Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATS_MOUSE4.724e-2234.30Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATL1_CHICK4.724e-2265.00Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CPGP2_ZINOF8.058e-2256.18Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATL_SCHMA8.058e-2241.56Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CYSP3_SOLLC1.052e-2139.87Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YO05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259997 ID=DY259997; Name=DY259997; organism=Citrus clementina; type=EST; length=972bp
GTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAAAGGTTAAA
AAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTTTGGTTCTG
GGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAATCCGAGGA
AGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATACGGTTTCAA
GGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGCAAAATGTT
ATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAGTTGAAGCT
GAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCACATACGCTG
GATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTGGAAACGGG
ACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTCGATTGGAG
GAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATGCGGTAGCT
GCTGGGCTTTTTCCACAATTGCAGCAGTAGAGGGCATTAATCCCATTATG
ACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAATTAGTTGATTGTGACCC
CGATCAAAACCAAGGATGTAATGGAGGGCACAGGGAATTGGCATTTGAGT
TTCACCAGAAAAAAGGGTGGCGTAACCACAGAAGCCTACTACCCTCTCCC
ACGCCAAGGACGGAACATGTCGACGTTCCCAACGGGACATCCCCCCACCA
GTGTTCATTGACCGGAACTGAAATTGAACCCGCCCAATCCCCAGCTAGCT
CCGCCTTAGGTCTTTTCACAAATCCCTGGTGTTCTTACCCCTCCACGCCC
GCTATTTCAAATTTCCATTACTATATACAGCGTGCACTCTCGGAACACCA
ACGTCCCACCCTCTCATACGCTGTTCGACCATAGGGTCTAGAGTTTCACC
TACTCGCTACGCTATCCTCACC
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