DY259997

Overview
NameDY259997
Unique NameDY259997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length972
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.052e-21
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 2
Query:  200 RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPS------SVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            +S DEK  R+N+F+ N+  ++Q N  +     K+N+FADM  +E         I+H  +  G  G   F    V   P+      S DWR    +T+VKDQG CG+CW F+++ A+E    I  ++L+ LSEQ+LVDCD   + GC+GG    A+E   K G
Sbjct:   52 KSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIV-------IRHTGLASGELGLN-FCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCD-FVDMGCDGGLIHTAYEQIMKMG 204          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.374e-21
Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 2
Query:  203 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI-------PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKGWRNHRSLLPSPT 703
            S  EK  RF +F+ N+  +   N+ D   + ++NKF+D++  E  S Y G  + H           T  + +V  +       P   DWR+   VT+VK+QG CG+CWAF+T+ ++E    I  N+L++LSEQ+ +DCD   N GC+GG    AFE   + G     S  P  T
Sbjct:   41 SESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLSLPHQ----------TQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCD-RVNAGCDGGLLHTAFESAMEMGGVQMESDYPYET 203          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.345e-21
Identity = 74/203 (36.45%), Postives = 97/203 (47.78%), Query Frame = 2
Query:  179 RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYK-LKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKGWRNHRSLLPSPTPRTEHVDVPNGTSPHQCSLTGTEIEPA 784
            + +  V +   E+  RF  F++N M   +      PY    +  F+DMT  EF + Y           +  R       G+    P++VDWR+KG+VT VK QGQCGSCWAFSTI  +EG   +  N LVSLSEQ LV CD   + GCNGG  + AF +       N  +    P          NG  P QC + G EI  A
Sbjct:   46 KKYGKVYKDAKEEAFRFRAFEEN-MEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVNVTTGRA---PAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD-TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVS------GNGEQP-QCQMNGHEIGAA 236          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.345e-21
Identity = 64/172 (37.21%), Postives = 93/172 (54.07%), Query Frame = 2
Query:  158 WDLYERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQ---NQGCNGGHRELAFEF 652
            WDL+++ R      ++  E+  R  ++++N+    +H  + +     Y + +N   DMT  E    Y GS     R+ +    +GT       ++P SVDWR+KG VT VK QG CGSCWAFS   A+EG   + T KLVSLS Q LVDC  ++   N+GC GG    AF++
Sbjct:   26 WDLWKKTRMRRNTDQN--EEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIG-YMGSL----RIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQY 190          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.062e-21
Identity = 59/173 (34.10%), Postives = 95/173 (54.91%), Query Frame = 2
Query:  161 DLYERWRSHHTVSRSLD-EKHKRFNVFKQNVMHVHQTN--KMDKPYKL-KLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            D +E +  ++  + + D EK+KR+++FK N+  ++  N    D P    K+NKF+D++  E  + + G  I               +       P   DWR++  VT++K+QG CG+CWAF+T+A+VE    +  N+L+ LSEQ+L+DCD   + GCNGG    AFE   + G
Sbjct:   54 DYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPER---VSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD-SVDMGCNGGLLHTAFEEIMRMG 222          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 3.062e-21
Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  179 RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQ--NQGCNGGHRELAFEF 652
            ++   V R + EK+ +F V   N+ H    +     Y L +N   DMT+ E  S  +  ++         + N T+       +P SVDWR+KG VT VK QG CG+CWAFS + A+E    + T KLVSLS Q LVDC  ++  N+GCNGG    AF++
Sbjct:   42 KNEEAVRRLIWEKNLKF-VMLHNLEHSMGMHS----YDLGMNHLGDMTSEEVMSLMSSLRVPSQ-----WQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQY 191          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.999e-21
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 2
Query:  428 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEF 652
            +P  +DWRKKG+VT VK+QG CGSCWAFST++ VE IN I T  L+SLSEQELVDCD  +N GC GG    A+++
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCD-KKNHGCLGGAFVFAYQY 74          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.999e-21
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 2
Query:  428 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEF 652
            +PS VDWR KG+V ++K+Q QCGSCWAFS +AAVE IN I T +L+SLSEQELVDCD   + GCNGG    AF++
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD-TASHGCNGGWMNNAFQY 74          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.999e-21
Identity = 62/179 (34.64%), Postives = 94/179 (52.51%), Query Frame = 2
Query:  194 VSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTY-------AGSKIKHHRMFQGTRGNGTFMYGKVTSIPS-------------SVDWRKKGSVTAVKDQGQ-CGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFEFHQKKG 667
            V RS D++ +RF  F++N  H+ +T+K  +PY L LNKF+D+++ EF + Y         + +  H  F+           K+                  +++W +  +V+ +KDQG  CGSCWAFS+IA+VE +  +  NK   LSEQELV+CD   + GC GG    A E+   KG
Sbjct:  130 VHRSFDQRVQRFLTFRKNY-HIVKTHKPTEPYSLDLNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCD-KSSMGCAGGLPITALEYIHSKG 306          
BLAST of DY259997 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.223e-21
Identity = 52/157 (33.12%), Postives = 91/157 (57.96%), Query Frame = 2
Query:  182 SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI-PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINPIMTNKLVSLSEQELVDCDPDQNQGCNGGHRELAFE 649
            +++ +     EK +RF++F+Q +  ++  N+++     ++NKFAD++ +E  S Y G  +      Q T    T +  +     P + DWR++  VT++K+Q  CG+CWAF+T+A++E    I  N  + LSEQ+++DCD   + GC+GG    AFE
Sbjct:   37 NYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMP----VQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCD-YVDMGCDGGLLHTAFE 188          
The following BLAST results are available for this feature:
BLAST of DY259997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATV_NPVSE1.052e-2137.04Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATV_NPVOP1.374e-2134.48Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CYSP_TRYBB2.345e-2136.45Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATS_RAT2.345e-2137.21Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATV_NPVLD3.062e-2134.10Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATS_HUMAN3.062e-2138.13Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
ERVC_TABDI3.999e-2161.33Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
ERVB_TABDI3.999e-2162.67Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP_THEAN3.999e-2134.64Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CATV_NPVBS5.223e-2133.12Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YO05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259997 ID=DY259997; Name=DY259997; organism=Citrus clementina; type=EST; length=972bp
GTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAAAGGTTAAA
AAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTTTGGTTCTG
GGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAATCCGAGGA
AGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATACGGTTTCAA
GGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGCAAAATGTT
ATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAGTTGAAGCT
GAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCACATACGCTG
GATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTGGAAACGGG
ACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTCGATTGGAG
GAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATGCGGTAGCT
GCTGGGCTTTTTCCACAATTGCAGCAGTAGAGGGCATTAATCCCATTATG
ACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAATTAGTTGATTGTGACCC
CGATCAAAACCAAGGATGTAATGGAGGGCACAGGGAATTGGCATTTGAGT
TTCACCAGAAAAAAGGGTGGCGTAACCACAGAAGCCTACTACCCTCTCCC
ACGCCAAGGACGGAACATGTCGACGTTCCCAACGGGACATCCCCCCACCA
GTGTTCATTGACCGGAACTGAAATTGAACCCGCCCAATCCCCAGCTAGCT
CCGCCTTAGGTCTTTTCACAAATCCCTGGTGTTCTTACCCCTCCACGCCC
GCTATTTCAAATTTCCATTACTATATACAGCGTGCACTCTCGGAACACCA
ACGTCCCACCCTCTCATACGCTGTTCGACCATAGGGTCTAGAGTTTCACC
TACTCGCTACGCTATCCTCACC
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