DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.064e-26 Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL-------------KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A KR+LKEL+ L KD P AGP +E+ +F W I GP D+PYA GVF + FP DYP PPK+ F + HPNI NG +C+ IL +E+WSP ++ K+LL + S+L++PN + + +++ ++ ++E Sbjct: 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFE 152
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.064e-26 Identity = 67/157 (42.68%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCS------AGPVAEDMFHWQ---ATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL----KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 S R+ KELK L DPP S A + D + A I GP D+ YA G+F + I P YPFQPP V+F T ++HPNI+++G +CLDIL K W P+L IS VL + LL++PNPDD L+ E++ Y+ ++ ++ AR T+KYA Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.546e-25 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 202 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS-DSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 RI+KE + L +P A P + ++ I G S DSP+ GG F + +YP PKV F TK++HPN++ + LDILK++WSPAL I VLL I +LL PNPDDPL ++ +++++A+ AR WT+ YAM Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYAM 150
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.019e-25 Identity = 55/146 (37.67%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILK-EQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKY 624 AS+R++KEL++++K + V E ++ WQ I+ P + PY G F + I+FP +YPF+PPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ + +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.019e-25 Identity = 55/146 (37.67%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILK-EQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKY 624 AS+R++KEL++++K + V E ++ WQ I+ P + PY G F + I+FP +YPF+PPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ + +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.019e-25 Identity = 55/146 (37.67%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILK-EQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKY 624 AS+R++KEL++++K + V E ++ WQ I+ P + PY G F + I+FP +YPF+PPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ + +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.637e-25 Identity = 55/146 (37.67%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILK-EQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKY 624 AS+R++KEL++++K + V E ++ WQ I+ P + PY G F + I+FP +YPF+PPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ + +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.444e-25 Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 202 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNIN-SNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQS-DKAKYESPARNWTQKYAM 630 R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P YP QPP+V F TK+FHPN++ G +CLDILK WSPA T+ V I +L+ P PD PL + + +S D + S A+ +T+ AM Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.875e-25 Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAMG 633 +++ KE+ L DPP P ED+ Q I GP +PYAGG+F + + D+P PPK F TK+FHPN+++NG +C+++LK+ W L I VLL I LL PNP+ L E + + +Y S AR T+ +A G Sbjct: 14 RQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQG 158
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.875e-25 Identity = 58/145 (40.00%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAMG 633 +R+ KE+ L DPP P ED+ Q I GP +PYAGG+F + + D+P PPK F TK+FHPN+++NG +C+++LK+ W L I VLL I LL PNP+ L E + + +Y S AR T +A G Sbjct: 14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTDIHAQG 158 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |