DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.002e-24 Identity = 54/160 (33.75%), Postives = 88/160 (55.00%), Query Frame = 1 Query: 184 RVMASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL-------------KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQK 621 + MA +R++KE K+L ++ P +AGP ED F W I GP +P+ GG++ T+ FP DYP PP + F + FHPN+ +G++C+ IL E+WSP ++ K+LL + S+L +PN + + M++ D+ +Y R +K Sbjct: 3 KAMALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.002e-24 Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL-------------KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQK 621 A KR++ E K L +PP AGP+ E+ F W+A IMGP D+ + GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LL + S+L +PN + + + M++ D+ ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQK 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.309e-24 Identity = 57/143 (39.86%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 +++ KE+ L DPP P ED+ Q +I GP +PYAGG+F + + D+P PPK F TK+FHPN++SNG +C+++LK+ W L I VLL I LL PNP+ L E + + +Y S AR T+ +A Sbjct: 14 RQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHA 156
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.309e-24 Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL-------------KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQK 621 A KR++ E K L +PP AGP+ E+ F W+A IMGP D+ + GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LL + S+L +PN + + + M++ D+ ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.309e-24 Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL-------------KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQK 621 A KR++ E K L +PP AGP+ E+ F W+A IMGP D+ + GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LL + S+L +PN + + + M++ D+ ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.309e-24 Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL-------------KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQK 621 A KR++ E K L +PP AGP+ E+ F W+A IMGP D+ + GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LL + S+L +PN + + + M++ D+ ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.709e-24 Identity = 54/133 (40.60%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKY 591 +KR+ EL L S SA PV + D+ +W I GP D+PY+G F V++ FP +YPF PP + F + ++HPN++ +G++CLDILKE+WS + +LL + SLL +PN PL A ++ +D +Y Sbjct: 10 TKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 199 KRILKELKDLQK-DPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNIN-SNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQS-DKAKYESPARNWTQKYAMG 633 KR+ KE Q D PV + DMFHW+A I GP+++PY GG +++ IH YP PP V F+TK+ HPNI+ +NG +C+DILK WSPA ++ L I SLL++ + PL + A + ++ DK Y S R T YA G Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.808e-24 Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAMG 633 +R+ KE+ L DPP P ED+ Q I GP +PYA G+F + + D+P PPK F TK+FHPN+++NG +C+++LK+ W L I VLL I LL PNP+ L E + + +Y S A+ T+ +A G Sbjct: 14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAKLMTEIHAQG 158
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.108e-23 Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 205 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQ 618 + KE+ L DPP P ED+ Q TI GP +PYAGG+F + + D+P PPK F TK+FHPN+ +NG +C+++LK W+ L I VLL I LL PNP+ L E + + +Y + AR T+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |