DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.073e-18 Identity = 46/134 (34.33%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A R+ K+L +L P T + P AED+ +++ T+ P + Y GG F + + P++P +PPKV KV+HPNI+ G++CL+IL+E W P L+++ V++ + L +PN DPL + A +++ +++ Sbjct: 25 AQLRVQKDLSELSL-PSTMKTHFPSAEDIMNFELTVR-PDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFK 156
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.078e-18 Identity = 49/152 (32.24%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQ--WSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKY 624 ++S R+ +E K+ ++D P A P +++ W I G + + + GGV+ + + F DYP +PPK F FHPN+ +G++CL IL E+ W P++TI VLL I LL +PNP P ++ ++K +Y+ + ++ Y Sbjct: 4 ISSARLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVY 155
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 4.078e-18 Identity = 49/150 (32.67%), Postives = 81/150 (54.00%), Query Frame = 1 Query: 187 VMASKRILKELKDLQKD-PPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL-KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 +MASKR+ KEL+ L K+ PP ++ W ++ P PY F V I FP +YPF+PP + F TK++HPN+ +G +CL ++ E W P +VL + L++ PN ++P+ E+A + + + A +T K+ + Sbjct: 1 MMASKRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLL-PDQLPYGLKAFQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKKAEEFTLKFGV 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.956e-18 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A RI K++ +L P +C +D+ +++ I P + Y GG F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + Q+++ +E Sbjct: 30 AQLRIQKDINELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.085e-18 Identity = 45/125 (36.00%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 265 VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINS-NGSLCLDILKEQWSP---ALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 V ++M + GPS++PY+GG++ V + P +YP++ P + F ++FHPNI+ +GS+CLD++ + WSP + I +V LP LL PN DPL E A + + Y + R++ +YA Sbjct: 25 VNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLP--QLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYA 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.085e-18 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A RI K++ +L P +C +D+ +++ I P + Y GG F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + Q+++ +E Sbjct: 30 AQLRIQKDITELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.187e-17 Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A RI K++ +L P T + +D+ +++ I P + Y G F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + Q+++ +E Sbjct: 30 AQLRIQKDINELNL-PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.187e-17 Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A RI K++ +L P T + +D+ +++ I P + Y G F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + Q+++ +E Sbjct: 30 AQLRIQKDINELNL-PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.187e-17 Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A RI K++ +L P T + +D+ +++ I P + Y G F+ + YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + Q+++ +E Sbjct: 30 AQLRIQKDINELNL-PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2Z_DANRE (Ubiquitin-conjugating enzyme E2 Z OS=Danio rerio GN=ube2z PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.550e-17 Identity = 56/153 (36.60%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 202 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKV-----AFRTKVFHPNINSNGSLCLDIL----KEQWSPALTISKVLLPICSLLTD-PNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 RI +++ + K+PP P DM A I GP D+PY GG FL PPDYP PP+V T F+PN NG +CL IL WSPA +IS VL+ I SL+T+ P ++P + + D Y R+ T + A+ Sbjct: 75 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLITTGHNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQ--ERHPGDSKNYNECIRHETMRVAV 225 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |