DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 5.512e-15 Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKV-FHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLT 522 +A R+ KEL + Q +PPT V +++ W + G + YA + + + FP YP + P+V F + HP+I SNG +CLDIL + WSPA+T++ V + I S+L+ Sbjct: 15 IACNRLQKELSEWQLNPPTGFRH-KVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS 125
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.199e-15 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 298 IMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPAR 606 I+ P + Y G + F YP +PPKV K+FHPNI+ G++CL+IL+E WSPAL + ++ + L +PNP+DPL + A + + ++ R Sbjct: 67 IVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 169
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.604e-14 Identity = 48/153 (31.37%), Postives = 72/153 (47.06%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQ------WSPALTISKVLLPICSLLTD-PNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 M K ++ E+ +L+ + P +C + H + P + Y GG F I P Y PPKV TK++HPNI G +CL +L+E W+P T+ V+ + SL TD N DPL E A + DK + + ++YA Sbjct: 32 MRDKLLVTEVAELEANLPWTCKVHFPDPNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRRYA 184
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.095e-14 Identity = 58/194 (29.90%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAG-----------PVAEDMFH-WQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRT----------------------------------KVFHPNINSN-GSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQ-SDKAKYESPARNWTQKYAM 630 A KR+L+E + + K+ SA PV+ED F+ W A + GP+D+ Y + + I P +YP QPPK F ++ HPNI N G +CLDIL+ +W+PA T+S L I LL DP P PL ++A + + +D Y S + +Y++ Sbjct: 3 AEKRLLQEYRSILKEQRQKGSASTLSSNGILDLKPVSEDNFYKWTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTFIVSDDIPRNRRQRQTNQIQDDDEFEGAEKEVLRHCYRMPHPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMKINDLKAYNSLIEYYVGRYSI 196
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.736e-14 Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 301 MGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYES 597 + P + Y GG F ++ F YP +PP V ++HPNI+ +G++CL++L+E WSP + + V+L + L +PN DPL + A D ++E+ Sbjct: 65 ISPEEGVYRGGHFRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAADTMLRDPYRFET 163
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBCX_YEAST (Ubiquitin-conjugating enzyme E2-21 kDa OS=Saccharomyces cerevisiae GN=PEX4 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14 Identity = 52/147 (35.37%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 202 RILKE----LKDLQKDPPTSC-------SAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAF-RTKVFHPNINS-NGSLCLDILK-EQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQ-SDKAKYE 594 RI+KE LK L D P + S P+ E D+ W+A I GPSD+PY F + I P YP PPK++F + + H N+ S G +CL+ILK E+W+P + + + LL +P D PL +I + + D + Y+ Sbjct: 21 RIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQ 167
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14 Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 1 Query: 307 PSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYES 597 P YAGG + + YP +PP V +++HPNI+ +G++CL++L+E W+PAL I +++ I L +PN DPL + A D ++E+ Sbjct: 67 PDIGYYAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLRFEN 163
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14 Identity = 40/117 (34.19%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILK---EQWSPALTISKVLLPICSLL-TDPN 531 A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++ I P DYPF+PP T + +N +CL I E W P+ ++ L+ + + + T PN Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPN 126
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14 Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKV-FHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLT 522 +A+ R+ KE + Q +PP+ V++++ W + G + YA + + + FP YP + P+V F+ HP+I SNG +CLD+L + WSPA+ +S + L I S+L+ Sbjct: 15 IATNRLQKEFMEWQTNPPSGFKHR-VSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLS 125
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.358e-13 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVF--HPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLT 522 KR+ KEL LQ DPP + V + W + G + Y G F + F YPF+ P+V F + HP++ SNG +CL IL E WSPAL++ V L I S+L+ Sbjct: 6 KRLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |