DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.316e-13 Identity = 43/112 (38.39%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTK--VFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLT 522 KR+ KEL LQ DPP + V + W + G + Y G F + F YPF P+V F + HP++ SNG +CL IL E WSPAL++ V L I S+L+ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.024e-13 Identity = 43/112 (38.39%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVF--HPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLT 522 KR+ KEL LQ DPP + V + W + G + Y G F + F YPF P+V F + HP++ SNG +CL IL E WSPAL++ V L I S+L+ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.950e-13 Identity = 39/115 (33.91%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 187 VMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCL---DILKEQWSPALTISKVLLPICSLLT 522 + A+KR+ KE K++ +PP A P +++ W I GP +PY G + T+ FP DYPF PP + T + N LCL D E W+PA ++ +L + S +T Sbjct: 4 IQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.159e-13 Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCL---DILKEQWSPALTISKVLLPICSLLT 522 A KR+ KE K + ++PP A P E++ W I GP D+PY GG + T+ FP DYP++PP + T + N LCL D + W+P +++ +L + S +T Sbjct: 6 AQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMT 116
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.738e-13 Identity = 39/113 (34.51%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCL---DILKEQWSPALTISKVLLPICSLLT 522 A KR+ KE K + ++PP A P +++ W I GP+D+PY GG + T+ FP DYP++PP + T + N LCL D + W+P ++S +L + S +T Sbjct: 6 AHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMT 116
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC34_ARATH (Ubiquitin carrier protein E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.560e-12 Identity = 36/115 (31.30%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCL---DILKEQWSPALTISKVLLPICSLLTDPNP 534 KR+ KE + L K+P + A P D+ W + G +P+AGG + I FPP+YP++PP + T + + +CL D E W+P ++S +L + S + D +P Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.367e-12 Identity = 35/116 (30.17%), Postives = 56/116 (48.28%), Query Frame = 1 Query: 286 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL--------------KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKY 591 W DS YAG + + FP YP +PP + F +K+FHPNI +G +C+ IL K++W+P I +++ I +L PN P + + MY+ + +Y Sbjct: 68 WDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEY 183
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.367e-12 Identity = 36/115 (31.30%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCL---DILKEQWSPALTISKVLLPICSLLTDPNP 534 KR+ KE + L K+P + A P D+ W + G +P+AGG + I FPP+YP++PP + T + + +CL D E W+P ++S +L + S + D +P Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.450e-12 Identity = 42/142 (29.58%), Postives = 68/142 (47.89%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCL---DILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARN 609 A KR+ KE K + ++PP A P +++ W I GP ++PY G + T+ FP DYPF PP + T + N LCL D + W+P+ +++ +L + S +T I M +D K + A++ Sbjct: 6 AYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTDE------SSIGTMESTDSTKRKYAAKS 139
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.167e-11 Identity = 39/112 (34.82%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL---KEQWSPALTISKVLLPICSLL 519 A KR++KE +L KDP A P+ +++F W T+ GP DS + GGV+ I PP+YP +PP + T + +CL I E W P+ +I LL I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |