DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.764e-64 Identity = 111/147 (75.51%), Postives = 126/147 (85.71%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 MA KRI KEL DL +DPP CSAGPV +DMFHWQATIMGP+DSPY GGVF +TIHFP DYPF+PPKVAF T+++HPNINSN S+CLDIL+ QWSPALTISKVLL ICSLL DPNPDDPLVPEIA +Y++D+ KY +R WTQKYAM Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 4.162e-63 Identity = 113/149 (75.84%), Postives = 131/149 (87.92%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAMG 633 MASKRI +EL+D+Q+ PP +CSAGPVAE D+FHWQATIMGP DSPY+GGVF V+I F DYPF+PPKV F+TKV+HPNI+S GS+CLDILKEQWSPA T SKVLL ICSLLTDPNP+DPLVPEIA +Y+ DK+KYES A+ WTQKYAMG Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYAMG 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 9.272e-63 Identity = 106/147 (72.11%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 M+ KRI KEL DL +DPP+SCSAGPV +D++HWQA+IMGP DSPYAGGVF ++IHFP DYP +PPK+A TK++HPNINSNG++CLDILK+QWSPALTISKVLL ICSLLTD NPDDPLVPEIA +Y+ D+ KYE+ A+ WT+KYA+ Sbjct: 1 MSLKRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYAV 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 4.602e-62 Identity = 108/147 (73.47%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 MA KRI KEL DL +DPP CSAGPV EDMFHWQATIMGP+DSPY GG F +TI FP +YPF+PPKV F T+++HPN+NSNGS+CLDIL+ QWSPALTISKVLL I SLL DPNPDDPLVPEIA +Y++D+ KY AR WTQKYAM Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 4.602e-62 Identity = 108/147 (73.47%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 MA KRI KEL DL +DPP CSAGPV EDMFHWQATIMGP+DSPY GG F +TI FP +YPF+PPKV F T+++HPN+NSNGS+CLDIL+ QWSPALTISKVLL I SLL DPNPDDPLVPEIA +Y++D+ KY AR WTQKYAM Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.939e-48 Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F PDYPF+PPKV FRT+++H NINS G +CLDILK+ WSPALTISKVLL ICSLLTD NP DPLV IA Y +++A+++ AR WT++YA Sbjct: 56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.939e-48 Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F PDYPF+PPKV FRT+++H NINS G +CLDILK+ WSPALTISKVLL ICSLLTD NP DPLV IA Y +++A+++ AR WT++YA Sbjct: 56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.939e-48 Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 ++KRI KEL D+ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F P+YPF+PPKV FRT+++H NINS G +CLDILK+ WSPALTISKVLL ICSLLTD NP DPLV IA Y +++A+++ AR WT++YA Sbjct: 48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.939e-48 Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 ++KRI KEL D+ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F P+YPF+PPKV FRT+++H NINS G +CLDILK+ WSPALTISKVLL ICSLLTD NP DPLV IA Y +++A+++ AR WT++YA Sbjct: 48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 4.181e-47 Identity = 85/145 (58.62%), Postives = 111/145 (76.55%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 ++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P+YPF+PPKV FRT+++H NINS G +CLDILK+ WSPALTISKVLL ICSLLTD NP DPLV IA Y ++ +++ AR WT++YA Sbjct: 87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |