DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 9.315e-47 Identity = 85/145 (58.62%), Postives = 112/145 (77.24%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPF+PPKV FRT+++H NINS G +CLDILK+ WSPALTISKVLL ICSLLTD NP DPLV IA Y +++A+++ AR WT++YA Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 9.315e-47 Identity = 85/145 (58.62%), Postives = 112/145 (77.24%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPF+PPKV FRT+++H NINS G +CLDILK+ WSPALTISKVLL ICSLLTD NP DPLV IA Y +++A+++ AR WT++YA Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 9.315e-47 Identity = 85/145 (58.62%), Postives = 112/145 (77.24%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F DYPF+PPKV FRT+++H NINS G +CLDILK+ WSPALTISKVLL ICSLLTD NP DPLV IA Y +++A+++ AR WT++YA Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.440e-39 Identity = 69/145 (47.59%), Postives = 105/145 (72.41%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 + KRI +E+ +L DPP CSAGP ++++HW ATI+GPS +PY GG+F + I FP DYPF+PPK+ F+T+++H N+++ G L ++IL++ WSPALTI+KVL I S+ P P P +P IA +Y +D+ K++ A+ WT ++A Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFA 181
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 70/145 (48.28%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAMG 633 +RI+KE + L +P SA P E+M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++HPNI+ G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL IA ++S++A+ A+ WT+ YA G Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASG 152
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.395e-34 Identity = 69/146 (47.26%), Postives = 98/146 (67.12%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNIN-SNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 A KR+ KE+ D+ K PP+ CSA V +++ W+AT+ GP SP+ GVF + I P DYPF+PP + F TK++HPNI S+G++C ++ WSP L I VL I S+LTDPNPD+PL EIA +++D+ + A+ WT+KYA Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFST-WSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYA 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.822e-34 Identity = 61/125 (48.80%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 253 SAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 S G + +++ W A I GP +PY GG+F ++I FP DYPF+PPK F+T ++HPNIN GS+C++ILK++W+PAL + KVLL I LL PNPDDPLVPEI ++++++ +++ AR +T ++A Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.380e-34 Identity = 69/145 (47.59%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAMG 633 +RI+KE + L +P SA P ++M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++HPNI+ G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL IA ++S++A+ A+ WT+ YA G Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYASG 152
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.302e-34 Identity = 65/146 (44.52%), Postives = 99/146 (67.81%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQ-WSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 +S+R+ KE DL++ P V +++FHW T +GPSDS YAGG F ++ FP DYPFQPP + F T+++HPN +S G++CL ILK+Q + P++ + VL I LL +PNPDDPLV IA Y++D+ ++ AR++ +++A Sbjct: 8 SSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.924e-34 Identity = 65/133 (48.87%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKY 591 A KR++ + K LQKDPP S P ++ HW A I GP D+P+ GG F +T+HF DYP +PP V F +++FHPNI ++GS+CLDIL+ QWSP ++ VL I SLL DPNPD P E A ++ +K +Y Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREY 137 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |