DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.015e-33 Identity = 65/144 (45.14%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 +RI+KE + L ++P +A P + ++ + GP+DSP+ GGVF + + P DYP PKV F TK++HPNI+ G +CLD+LK++WSPAL I +LL I +LL+ PNPDDPL ++A +++ ++A+ AR WTQKYA+ Sbjct: 6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYAV 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 9.999e-33 Identity = 66/143 (46.15%), Postives = 95/143 (66.43%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 KRI+KE + L +P SA P ++ +++ I GP DSP+ GGVF + + DYP PKV F TK++HPNI+ G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL ++A +++++ + + AR WT+ YA Sbjct: 6 KRIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARAREWTRLYA 148
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.227e-32 Identity = 64/144 (44.44%), Postives = 94/144 (65.28%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ +G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL ++A +++++A+ AR WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.909e-32 Identity = 65/144 (45.14%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL ++A ++S++A+ AR WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRLYAM 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.909e-32 Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPAR-----NWT 615 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP +PP V F +++FHPNI ++GS+CLDIL+ QWSP ++ +L I SLL DPNP+ P E A MY +K +Y R +WT Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWT 150
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.799e-32 Identity = 65/143 (45.45%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 KRI+KE + L DP +A P +++ ++Q TI GP SPY G+F + ++ P DYP + PKV F TK++HPNI+ G +CLD+LK WSPAL I VLL I +LL PNP+DPL ++A + ++ ++ AR WT+ YA Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.799e-32 Identity = 62/144 (43.06%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 KRI+KE++ L +DPP A P +++ +++ T+ GP S Y GG F + + P +YP PP V F TK++HPN++ G +CL LK+ WSPAL I VLL I +L+ PNPDDPL ++A +++ ++ + + AR WT+KYA+ Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.481e-32 Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL ++A +++++A+ AR WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.481e-32 Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL ++A +++++A+ AR WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.481e-32 Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL ++A +++++A+ AR WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |