DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.481e-32 Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 199 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYAM 630 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G +CLDILK++WSPAL I VLL I +LL+ PNPDDPL ++A +++++A+ AR WT+ YAM Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.481e-32 Identity = 62/139 (44.60%), Postives = 88/139 (63.31%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARN 609 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP +PP V F +++FHPNI ++GS+CLDIL+ QWSP ++ +L I SLL DPNP+ P E A MY K +Y R+ Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRD 143
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.886e-31 Identity = 59/134 (44.03%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP +PP V F +KVFHPN+ ++G +CLDIL+ +WSP +S +L I SLL+DPNP+ P A +Y+ ++ +YE Sbjct: 5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYE 138
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.886e-31 Identity = 63/146 (43.15%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPAR-----NWT 615 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP +PP V F +++FHPNI ++GS+CLDIL+ QWSP ++ +L I SLL DPNP+ P E A M+ K +Y R +WT Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWT 150
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.886e-31 Identity = 62/145 (42.76%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINS-NGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 S+RI KEL D+Q+D + +D+ H + GP +PY GG F+V I P DYPF+PPK+ F TK++HPN++S G++CLDILK+QWSP T+ L+ + SLL P P +P ++A +Y + ++ AR WT YA Sbjct: 6 SRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.463e-31 Identity = 63/146 (43.15%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPAR-----NWT 615 A KR++++ K LQ DPP S P ++ W A I GP D+P+ GG F +++ F DYP +PP V F +++FHPNI ++GS+CLDIL+ QWSP ++ +L I SLL DPNP+ P E A M+ +K +Y R +WT Sbjct: 5 ARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWT 150
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 7.165e-31 Identity = 64/146 (43.84%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINS-NGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 +KRI+KE++ ++ DP + V+E D+ H + T +GP +PY GG F+V I P +YPF+PPK+ F TKV+HPNI+S G++CLDILK WSP +T+ L+ + +LL P P+DP E+A Y D+ + A WT+ YA Sbjct: 4 AKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 149
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.358e-31 Identity = 58/134 (43.28%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F +TI F +YP +PP V F +K+FHPN+ ++GS+CLDIL+ +WSP +S +L I SLL +PNP+ P + A +YQ +K +YE Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 9.358e-31 Identity = 58/134 (43.28%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F +TI F +YP +PP V F +K+FHPN+ ++GS+CLDIL+ +WSP +S +L I SLL +PNP+ P + A +YQ +K +YE Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.222e-30 Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F + I F +YP +PP V F +K+FHPN+ ++GS+CLDIL+ +WSP +S +L I SLL +PNP+ P + A +YQ +K +YE Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |