DY260005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.951e-28 Identity = 52/143 (36.36%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQK 621 A +R++++ K +++D P SA P+ +++ W A I+GP+D+PY G F + + F +YP +PP V F +++FHPN+ +NG +CLDIL+ +W+P ++ +L I SL DPNP P E A +++ K++Y + +K Sbjct: 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEK 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.951e-28 Identity = 52/143 (36.36%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQK 621 A +R++++ K +++D P SA P+ +++ W A I+GP+D+PY G F + + F +YP +PP V F +++FHPN+ +NG +CLDIL+ +W+P ++ +L I SL DPNP P E A +++ K++Y + +K Sbjct: 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEK 147
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.806e-27 Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL----KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 + R+ +EL L +PP + + M +A I+G +++PY GVF + +H P YPF+PP++ F T ++HPNI+S G +CLD+L K W P+L I+ +L I L+ +PNPDDPL+ +I+ ++ +K + AR WT+K+A Sbjct: 4 TSRLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHA 151
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.826e-26 Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL----KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 + R+ +EL L +PP + + M +A I+G +++PY GVF + + P YPF+PP++ F T ++HPNI+S G +CLD+L K W P+L I+ VL I L+++PNPDDPL+ +I+ ++ +K + AR WT+K+A Sbjct: 4 ASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHA 151
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.826e-26 Identity = 53/134 (39.55%), Postives = 82/134 (61.19%), Query Frame = 1 Query: 193 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYE 594 A +R++++ K L D P S P +++ W A I GP ++P+ G F +T+ F YP +PP V F +K+FHPNI +NG LCLDIL+ +WSP ++ +L + SLL DPNP P + A +++ + +YE Sbjct: 5 AKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYE 138
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 5.314e-26 Identity = 57/148 (38.51%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDIL----KEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 + R+ KEL L +PP + + + +A I+G +++PY GVF + + P YPF+PP+V F T ++HPNI+S+G +CLDIL K W P+L I+ VL I L+ +PNPDDPL+ +I+ ++ +K + A+ WT+ +A Sbjct: 4 ASRLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHA 151
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 6.940e-26 Identity = 62/150 (41.33%), Postives = 88/150 (58.67%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTS---CSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINS-NGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 +A +RI +E K++ K TS V E+ + I GP D+PY GG + + I P YPF PPKV F TK++HPNI+S G++CLDILK+QW+ A+T+ VLL + +LL PDDP +A Y+ + ++ AR W YA Sbjct: 4 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 6.940e-26 Identity = 62/150 (41.33%), Postives = 88/150 (58.67%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTS---CSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINS-NGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 +A +RI +E K++ K TS V E+ + I GP D+PY GG + + I P YPF PPKV F TK++HPNI+S G++CLDILK+QW+ A+T+ VLL + +LL PDDP +A Y+ + ++ AR W YA Sbjct: 4 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 6.940e-26 Identity = 62/150 (41.33%), Postives = 88/150 (58.67%), Query Frame = 1 Query: 190 MASKRILKELKDLQKDPPTS---CSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINS-NGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQSDKAKYESPARNWTQKYA 627 +A +RI +E K++ K TS V E+ + I GP D+PY GG + + I P YPF PPKV F TK++HPNI+S G++CLDILK+QW+ A+T+ VLL + +LL PDDP +A Y+ + ++ AR W YA Sbjct: 4 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of DY260005 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.064e-26 Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 1 Query: 196 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFQPPKVAFRTKVFHPNINSNGSLCLDILKEQWSPALTISKVLLPICSLLTDPNPDDPLVPEIAPMYQS 576 SKR+ EL +L P SA P +++F+W TI G D+ Y F +++ FP DYP++PP V F T+ FHPN+++NG++CLDILK++WSP + +L+ I SLL +PN + PL A ++ + Sbjct: 8 SKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSN 134 The following BLAST results are available for this feature:
BLAST of DY260005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 264
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260005 ID=DY260005; Name=DY260005; organism=Citrus clementina; type=EST; length=962bpback to top |