DY260008

Overview
NameDY260008
Unique NameDY260008
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length923
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: GSHR_YARLI (Glutathione reductase OS=Yarrowia lipolytica GN=GLR1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.673e-27
Identity = 85/254 (33.46%), Postives = 125/254 (49.21%), Query Frame = 1
Query:    7 ARSYGW-EVHEKI--DFDWKKLLQKKTDEILRLNGIYKRLLSNAGVK-------LYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT---DHGE-EIVADVVLFATGQAPNTKRLNLKAVGVEV*STGTCEGGTKTPPQTSPVYGL 726
            A+ YG+ +V  K   +FDW     K+   + RLNGIY+R L   GV+       LY+ EG+      V V   DG    YSAK I+IATG + +   +PG E  I SD   +LE  PKR  V+GGGYI VE A ++ G+ S   L  R +  LR FD  ++  +       GIN+   + +K+++K + G  ++T   D  E +I  D +++  G+ P    LNL   G++    G  E           +Y L
Sbjct:   68 AKEYGFPDVDPKYADNFDWSGFKAKRDAYVKRLNGIYERNLQKEGVEYVFGWATLYKQEGQEFPL--VHVKSDDGNTKLYSAKKIMIATGGKPRLPDVPGAEYGIDSDGFFALETQPKRVAVVGGGYIGVELAGVFHGLNSETTLFCRGQTVLRAFDIMIQDTITDYYVKEGINVLKGSGVKKIVKKDNGELLVTYEQDGAEKDITLDSLIWTIGREPLKDTLNLGEFGIKTNKRGYIEVDEYQRSSVDNIYSL 319          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: GSHR_KLULA (Glutathione reductase OS=Kluyveromyces lactis GN=GLR1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.673e-27
Identity = 74/213 (34.74%), Postives = 117/213 (54.93%), Query Frame = 1
Query:   34 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRA-QRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK--VITDHGEEI-VADVVLFATGQAPNTKRLNLKAVGVEV 660
            E + F+W +  +K+   I RLNGIY+R L+  GV    G        +V+V + D    +Y+A HIL+ATG +    A IPG +  ++SDE   LE+ PK+ VV+G GYI VE A ++ G+GS   L+ R E  LR FDD ++  V       G+N+H  + + ++ K E   K  +  D G+ I   D +++  G+  +   L L+ +GV++
Sbjct:   98 ENLTFNWPEFKKKRDAYIHRLNGIYERNLTKEGVDYVYGWASFTVDGKVQVKKADNCTETYTADHILVATGGKPIYPAKIPGYDYGVSSDEFFELEDQPKKVVVVGAGYIGVEIAGVFNGLGSDSHLVIRGETVLRKFDDCIQETVTDTYIKEGVNIHKSSNVTKVEKDESTGKLNIQLDTGKNIDNVDSLIWTIGRR-SLLGLGLENIGVKL 309          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: TYTR_TRYCO (Trypanothione reductase OS=Trypanosoma congolense GN=TPR PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.309e-26
Identity = 79/232 (34.05%), Postives = 123/232 (53.02%), Query Frame = 1
Query:   16 YGWEVHEK-IDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQ----LDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVIT-DHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STGTCE 681
            +GWE     I  +WK L+  K   +L +N  Y+ +  +  G++ + G G +   N V V +        K    A+HI+IATGS  Q   IPG E  I+S+EA  LEE P+R + +GGG+I+VEFA I   ++ +G  V L +R    LRGFD  +R  + + L   GI++       ++  + +G K +T + G+ +  DVV+ A G+ P T  L L+ VGV +   G  +
Sbjct:   79 FGWEFDASTIKANWKTLIAAKNAAVLDINKSYEDMFKDTEGLEFFLGWGALEQKNVVTVREGADPKSKVKERLQAEHIIIATGSWPQMLKIPGIEHCISSNEAFYLEEPPRRVLTVGGGFISVEFAGIFNAYKPVGGKVTLCYRNNPILRGFDYTLRQELTKQLVANGIDIMTNENPSKIELNPDGSKHVTFESGKTLDVDVVMMAIGRLPRTGYLQLQTVGVNLTDKGAIQ 310          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: GSHR_ECOLI (Glutathione reductase OS=Escherichia coli (strain K12) GN=gor PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.916e-26
Identity = 73/224 (32.59%), Postives = 113/224 (50.45%), Query Frame = 1
Query:    4 YARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672
            Y   YG++      F+W+ L+  +T  I R++  Y+ +L    V + +G  + V    +EV   +G  ++  A HILIATG R     IPG E  I SD   +L  LP+R  V+G GYIAVE A +  G+G+   L  RK  PLR FD  +   +   +   G  LH     K ++K+ +G + +  + G     D +++A G+ P    +NL+A GV+    G
Sbjct:   66 YGPDYGFDTTIN-KFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV---NGETIT--ADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKG 283          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: GSHR_CALJA (Glutathione reductase, mitochondrial OS=Callithrix jacchus GN=GSR PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.808e-26
Identity = 76/227 (33.48%), Postives = 117/227 (51.54%), Query Frame = 1
Query:   46 FDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKV---------------ITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672
            F+W+ + +K+   + RLN IY+  L+ A +++  G        +  + ++ G K  Y+A HILIATG   S    + IPG  L ITSD    LEELP R+V++G GYIAVE A I   +GS   L+ R +  LR FD  +       LE  G+ +   + +KE+ K+  G++V               I+D       D +L+A G+ PN+K L+L  +G++    G
Sbjct:  138 FNWRVIKEKRDTYVSRLNTIYQNNLTKAHIEIIHGHAVFTSDTKPTI-EVSGRK--YTAPHILIATGGMPSSPHESQIPGASLGITSDGFFELEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTSSGLEVSLVTAVPGRLPVMTTISD------VDCLLWAIGRDPNSKGLSLNKLGIKTDDKG 355          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: GSHR_HUMAN (Glutathione reductase, mitochondrial OS=Homo sapiens GN=GSR PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26
Identity = 75/221 (33.94%), Postives = 117/221 (52.94%), Query Frame = 1
Query:   46 FDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKV--ITDHGEEIV-------ADVVLFATGQAPNTKRLNLKAVGVEV*STG 672
            F+W+ + +K+   + RLN IY+  L+ + +++  G        +  + ++ G K  Y+A HILIATG   S    + IPG  L ITSD    LEELP R+V++G GYIAVE A I   +GS   L+ R +  LR FD  +       LE  G+ +   + +KE+ K+  G++V  +T     +         D +L+A G+ PNTK L+L  +G++    G
Sbjct:  138 FNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTI-EVSGKK--YTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKG 355          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: GSHR_MOUSE (Glutathione reductase, mitochondrial OS=Mus musculus GN=Gsr PE=2 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 1.108e-25
Identity = 80/232 (34.48%), Postives = 122/232 (52.59%), Query Frame = 1
Query:   16 YGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIV-GPNEVEVTQLDGTKLSYSAKHILIATG---SRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK---VITDHGEEIV------ADVVLFATGQAPNTKRLNLKAVGVEV*STG 672
            YG++  E   F W  + QK+   + RLN IY+  L+ + +++  G      GP      +++G K  ++A HILIATG   +    + IPG  L ITSD    LE+LP R+V++G GYIAVE A I   +GS   L+ R +  LR FD  + +     LE  G+ +   T +KE+ K+  G++   V +  G +         D +L+A G+ PN+K LNL  VG++    G
Sbjct:  107 YGFQSCEG-KFSWHVIKQKRDAYVSRLNTIYQNNLTKSHIEIIHGYATFADGPRPT--VEVNGKK--FTAPHILIATGGVPTVPHESQIPGASLGITSDGFFQLEDLPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRNFDSLISSNCTEELENAGVEVLKFTQVKEVKKTSSGLELQVVTSVPGRKPTTTMIPDVDCLLWAIGRDPNSKGLNLNKVGIQTDEKG 333          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: GSHR_SCHPO (Glutathione reductase OS=Schizosaccharomyces pombe GN=pgr1 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.447e-25
Identity = 88/278 (31.65%), Postives = 130/278 (46.76%), Query Frame = 1
Query:    7 ARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLS-YSAKHILIATGSRA-QRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRT-TIKELIKSEEGVKVI-TDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STGTCEGGTKTPPQTSPVYGLVVMETKPRNPTP-----GPLGGRESPSPKTVFRG 813
            A+  G+   +   FDW  + +K+   I RLNGIY+R ++  GV    G    V P EV V   DG+    +SAK+ILIA G      + IPG E  I SD    LE  PKR  ++G GYIAVE A ++  +G+   +  R+   LR FD  +   +  + +  GIN+H  +   K++ K   G   I    G     D +L+A G+AP  + L L+  GV            KT P      G+++ +T  R   P     G + G+   +P  +  G
Sbjct:   70 AKQNGFPNSQLGSFDWGMIKRKRDAYIGRLNGIYERNVNKDGVAYISGHASFVSPTEVAVDMNDGSGTQVFSAKYILIAVGGHPIWPSHIPGAEYGIDSDGFFELESQPKRVAIVGAGYIAVELAGVFAALGTETHMFIRQSKFLRKFDPIISDGIMDHFQHIGINVHTNSLEFKKVEKLPSGELCIHQQDGSTFNVDTLLWAIGRAPKIQGLRLEKAGV------------KTLPN-----GIIIADTYQRTNVPTVLSLGDVCGKLELTPVAIAAG 330          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: TRXR1_RAT (Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus GN=Txnrd1 PE=1 SV=4)

HSP 1 Score: 116.701 bits (291), Expect = 1.890e-25
Identity = 73/228 (32.02%), Postives = 119/228 (52.19%), Query Frame = 1
Query:    7 ARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG-QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG------VKVITDHGEEIVAD---VVLFATGQAPNTKRLNLKAVGVEV 660
            +R+YGW++ + +  DW+K+ +   + I  LN  Y+  L    V      GK +GP+++  T   G +  YSA+  LIATG R +   IPG +E  I+SD+  SL   P + +V+G  Y+A+E A    G+G  V ++ R  L LRGFD +M   +  ++E  GI    +    ++ + E G      V   + + EE + D    VL A G+   T+ + L+ VGV++
Sbjct:   83 SRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL-LRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI 309          
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: GSHR_CANGA (Glutathione reductase OS=Candida glabrata GN=GLR1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.890e-25
Identity = 68/175 (38.86%), Postives = 96/175 (54.86%), Query Frame = 1
Query:   34 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSR-AQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKV 555
            E I F+W +  +K+   I RLNGIY+  L   GV++  G  K      VEVT+ D T   YSA  IL+ATG +      +PG EL   SD    LEE PK+ VV+G GYI +E A ++ G+GS   L+ R +  LR FD+ ++  V       GIN+H  T + ++ K E+  K+
Sbjct:   92 ESITFNWPEFKKKRDAYIHRLNGIYENNLKKEGVEVVFGWAKFNKDGNVEVTKHDNTTEVYSADRILVATGGKPVYPEKVPGFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSDSHLVIRGKTVLRKFDEIIQNTVTDYYVEEGINVHKETNVDKVEKDEKTGKL 266          
The following BLAST results are available for this feature:
BLAST of DY260008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
GSHR_YARLI7.673e-2733.46Glutathione reductase OS=Yarrowia lipolytica GN=GL... [more]
GSHR_KLULA7.673e-2734.74Glutathione reductase OS=Kluyveromyces lactis GN=G... [more]
TYTR_TRYCO1.309e-2634.05Trypanothione reductase OS=Trypanosoma congolense ... [more]
GSHR_ECOLI2.916e-2632.59Glutathione reductase OS=Escherichia coli (strain ... [more]
GSHR_CALJA3.808e-2633.48Glutathione reductase, mitochondrial OS=Callithrix... [more]
GSHR_HUMAN4.974e-2633.94Glutathione reductase, mitochondrial OS=Homo sapie... [more]
GSHR_MOUSE1.108e-2534.48Glutathione reductase, mitochondrial OS=Mus muscul... [more]
GSHR_SCHPO1.447e-2531.65Glutathione reductase OS=Schizosaccharomyces pombe... [more]
TRXR1_RAT1.890e-2532.02Thioredoxin reductase 1, cytoplasmic OS=Rattus nor... [more]
GSHR_CANGA1.890e-2538.86Glutathione reductase OS=Candida glabrata GN=GLR1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YO21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260008 ID=DY260008; Name=DY260008; organism=Citrus clementina; type=EST; length=923bp
GCTTATGCAAGGAGTTATGGATGGGAGGTACACGAGAAAATTGACTTCGA
CTGGAAAAAACTTCTGCAAAAGAAGACAGATGAGATACTCAGATTAAATG
GAATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATGAAGGG
GAGGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGG
CACTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGGAAGTA
GGGCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGAC
GAGGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGG
AGGGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTA
CTGTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGAT
GAAATGCGGGCAGTAGTTGCCAGAAATCTGGAAGGGAGGGGAATTAATTT
GCACCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGGGTGTAA
AAGTTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTT
GCCACTGGCCAGGCACCCAATACAAAAAGGTTGAATTTGAAAGCTGTTGG
TGTGGAAGTTTAATCAACAGGGACCTGTGAGGGTGGAACGAAAACTCCCC
CCCAAACGTCCCCAGTATATGGGCTGGTGGTGATGGAAACTAAACCAAGG
AATCCTACCCCCGGGCCCCTTGGAGGGAGGGAAAGTCCCTCTCCAAAAAC
TGTCTTTCGGGGGAACCCCCCCCCACAACCCAACCAACAACGACGGTCCC
CCGCGGCTCGACATCTACCACCCCCCCCCCCCCTCCGCCACGCGCCTCTC
CCACACGGCACATCCACACAACG
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