DY260008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: STHA_ECO81 (Soluble pyridine nucleotide transhydrogenase OS=Escherichia coli O81 (strain ED1a) GN=sthA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.306e-13 Identity = 50/185 (27.03%), Postives = 94/185 (50.81%), Query Frame = 1 Query: 136 KLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAIT------SDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672 ++ +G + V + + + DG+ + +A+ +IA GSR P ++ T S+ LS+ P+ ++ G G I E+ASI+RGM VDL+ ++ L D EM ++ + G+ + +++ ++GV + G+++ AD +L+A G+ NT L L+ +G+E S G Sbjct: 111 EILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSR----PYHPTDVDFTHPRIYDSNSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALQNIGLETDSRG 291
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: DLDH_VIBPA (Dihydrolipoyl dehydrogenase OS=Vibrio parahaemolyticus GN=lpd PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.076e-12 Identity = 56/215 (26.05%), Postives = 108/215 (50.23%), Query Frame = 1 Query: 49 DWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVA-----DVVLFATGQAPNTKRLNLKAVGVEV*STG 672 D K+ K + +L G + V + G GK GPN + V + +G + + ++A GSR + P IP ++ I S +AL L+E+P++ +++GGG I +E +++ +GS V+++ + + D ++ V + ++ + L T + + E+G+ V + G++ A D VL A G+ PN K ++ + G+E+ G Sbjct: 82 DINKIRIWKEKVVNQLTGGLSGMAKMRNVTVVNGYGKFTGPNSILV-EGEGESTVVNFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLIMGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRIKDK-FKLMLETKVTAVEAKEDGIYVSME-GKKAPAEAERYDAVLVAIGRVPNGKLIDGEKAGLEIDERG 293
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: STHA_ENT38 (Soluble pyridine nucleotide transhydrogenase OS=Enterobacter sp. (strain 638) GN=sthA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.405e-12 Identity = 49/181 (27.07%), Postives = 88/181 (48.62%), Query Frame = 1 Query: 136 KLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIP--GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672 ++ +G+ V + + + DG+ + +A+ +IA GSR SD LSL P+ ++ G G I E+ASI+RGM VDL+ ++ L D EM ++ + G+ + + + ++GV + G+++ AD +L+A G+ NT L L+ +G+ S G Sbjct: 111 EILQGDAHFVDEHTLALKCHDGSVETITAEKFVIACGSRPYHPDDVDFSHPRVYDSDSILSLHHEPRHVLIYGAGVIGCEYASIFRGMEVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYERIEACDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALENIGLTTDSRG 291
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: DLDH_BUCBP (Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=lpdA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.835e-12 Identity = 57/222 (25.68%), Postives = 110/222 (49.55%), Query Frame = 1 Query: 34 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSY--SAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEE-----IVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672 EK+D + K++ + I + L V++ G K + N + V G SY S I+IATGS +++ IP ++ I S A+S+ +PK+ +++GGG I +E A+I+ +GS VD++ L D ++ + R++ N+ + + ++++ + G+ V + + D++L A G+ PNT L++ VG++ + G Sbjct: 78 EKLDINLKEIQCNQKKIIESFSSGISNLARKRNVRIIFGYAKFLDANSIFV---QGEHDSYVVSFNKIVIATGSLSKKLSYIPYDDIRIWNSSFAVSIPSIPKKLLIIGGGIIGLEMATIYSALGSNVDIIDNSHDILPHLDRDVIDIFKRSV-NHDYNIFFNSNVIKIVQEKNGLLVHIAENDNKNKRFELYDIILVAIGRVPNTDMLDISKVGLKTDNNG 295
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: LPDA_MYCTU (NAD(P)H dehydrogenase (quinone) OS=Mycobacterium tuberculosis GN=lpdA PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.339e-12 Identity = 56/221 (25.34%), Postives = 97/221 (43.89%), Query Frame = 1 Query: 40 IDFDWKKL------LQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGP------NEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI--PGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV 660 IDFD K+ + KT + I +LLS GV++ G G+++ + ++ T DG+ + A +L+ATG+ + P P E +T + L+ LP +V+G G EF + +G V ++ ++ L D + V+ + RG+ L + ++ GV V G + L G PNT L L+ VG+++ Sbjct: 74 IDFDDAKISLPQIHARVKTLAAAQSADITAQLLS-MGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQL 293
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: DLDH2_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=bfmBC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.973e-12 Identity = 56/218 (25.69%), Postives = 109/218 (50.00%), Query Frame = 1 Query: 40 IDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPN-------EVEVTQLDGTKLSYSA-KHILIATGSRAQRAPIPGQEL----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTI--KELIKSEEGVKVITDHGEEIV---ADVVLFATGQAPNTKRLNLK 642 + +++K+ Q+K + +L L+ + +Y G G+I+GP+ + V + +G + K ++IATGSR + +PG E+ +TSDEAL +EELP+ +++GGG I +E+AS+ G V ++ + L D E+ + L+ +GI + + K+ + + + + E V A+ +L + G+ N + + L+ Sbjct: 76 VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSPLPGTISVERGNGEENDMLIPKQVIIATGSRPRM--LPGLEVDGKSVLTSDEALQMEELPQSIIIVGGGVIGIEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAKVLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLE 291
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: STHA_MYCTU (Probable soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis GN=sthA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12 Identity = 50/193 (25.91%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 103 IYKRLLSNAGVKLYEGEGKIVGPNEVEVT-QLDGTKLSYSAKHILIATGSRAQRAPIP--GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672 + + L V L G G+ + P+ + V Q K + + +I+IATG+R R +E + SD L L+ LP VV+G G I +E+AS++ +G+ V ++ +++ L D E+ + +L + + + G G++I A+ V+++ G+ T L+L G+EV G Sbjct: 98 VVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRG 290
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: STHA_MYCTA (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=sthA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12 Identity = 50/193 (25.91%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 103 IYKRLLSNAGVKLYEGEGKIVGPNEVEVT-QLDGTKLSYSAKHILIATGSRAQRAPIP--GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672 + + L V L G G+ + P+ + V Q K + + +I+IATG+R R +E + SD L L+ LP VV+G G I +E+AS++ +G+ V ++ +++ L D E+ + +L + + + G G++I A+ V+++ G+ T L+L G+EV G Sbjct: 98 VVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRG 290
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: STHA_MYCBT (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12 Identity = 50/193 (25.91%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 103 IYKRLLSNAGVKLYEGEGKIVGPNEVEVT-QLDGTKLSYSAKHILIATGSRAQRAPIP--GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672 + + L V L G G+ + P+ + V Q K + + +I+IATG+R R +E + SD L L+ LP VV+G G I +E+AS++ +G+ V ++ +++ L D E+ + +L + + + G G++I A+ V+++ G+ T L+L G+EV G Sbjct: 98 VVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRG 290
BLAST of DY260008 vs. ExPASy Swiss-Prot
Match: STHA_MYCBP (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12 Identity = 50/193 (25.91%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 103 IYKRLLSNAGVKLYEGEGKIVGPNEVEVT-QLDGTKLSYSAKHILIATGSRAQRAPIP--GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGQAPNTKRLNLKAVGVEV*STG 672 + + L V L G G+ + P+ + V Q K + + +I+IATG+R R +E + SD L L+ LP VV+G G I +E+AS++ +G+ V ++ +++ L D E+ + +L + + + G G++I A+ V+++ G+ T L+L G+EV G Sbjct: 98 VVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRG 290 The following BLAST results are available for this feature:
BLAST of DY260008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260008 ID=DY260008; Name=DY260008; organism=Citrus clementina; type=EST; length=923bpback to top |