DY260012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260012 vs. ExPASy Swiss-Prot
Match: ARNA_PSEAB (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=arnA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.079e-19 Identity = 57/165 (34.55%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 2 FNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 475 FNW+GPR+D +D G R + +L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + + A+ A E V S+ FYG+GY D R P + + L W P L + + TL + Sbjct: 492 FNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDF 649
BLAST of DY260012 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA8 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain LESB58) GN=arnA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.079e-19 Identity = 57/165 (34.55%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 2 FNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 475 FNW+GPR+D +D G R + +L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + + A+ A E V S+ FYG+GY D R P + + L W P L + + TL + Sbjct: 492 FNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDF 649
BLAST of DY260012 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA7 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain PA7) GN=arnA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.478e-18 Identity = 56/165 (33.94%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 2 FNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 475 FNW+GPR+D ++ G R + +L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + + A+ A E V S+ FYG+GY D R P + + L W P L + + TL + Sbjct: 492 FNWMGPRLD---RLESARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIENARRLLDWQPAIELRETIGKTLDF 649
BLAST of DY260012 vs. ExPASy Swiss-Prot
Match: ARNA_AERS4 (Bifunctional polymyxin resistance protein arnA OS=Aeromonas salmonicida (strain A449) GN=arnA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.478e-18 Identity = 55/161 (34.16%), Postives = 83/161 (51.55%), Query Frame = 2 Query: 2 FNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 475 FNW+GPR+D +D G R + NL+ P++LVDGG +R F I+D IEA+ +IEN R +G I N+G+P NE ++ Q+AE++ + + V SK FYG+GY D R P + + L W P + + + TL + Sbjct: 493 FNWMGPRLD---SLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRIIENKGNRCDGQIINIGSPDNEASILQMAEVLLGKFEAHPLRHHFPPFAGFKRVESKSFYGDGYQDVSHRRPSIKNARRLLDWEPTIEMEETIGKTLDF 650
BLAST of DY260012 vs. ExPASy Swiss-Prot
Match: ARNA_WIGBR (Bifunctional polymyxin resistance protein arnA OS=Wigglesworthia glossinidia brevipalpis GN=arnA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17 Identity = 56/168 (33.33%), Postives = 83/168 (49.40%), Query Frame = 2 Query: 2 FNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEV---------YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 475 FNWIGP +D + + RV NL+ P+ +V+ G +R F I D IEA+ +I+N + N I N+GNPHNE T+ QL +++ + + K SG L S +YGEGY D D+R P++ I + L W PKT + L + + Sbjct: 490 FNWIGPGLDDFKIAEKQNA---RVTTQIIFNLINGLPVTIVNNGNQKRCFTDIDDGIEALFEIIKNKNNKCNKKIINIGNPHNEYTIMQLTKIIINIIYSNNRNYNFPKFSGFNML-------SGTNYYGEGYQDIDRRKPNIDIAKKLLNWTPKTKIRITLRKIINF 647 The following BLAST results are available for this feature:
BLAST of DY260012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260012 ID=DY260012; Name=DY260012; organism=Citrus clementina; type=EST; length=996bpback to top |