DY260020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.829e-20 Identity = 68/192 (35.42%), Postives = 87/192 (45.31%), Query Frame = 3 Query: 99 NCGSGVVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWR-DAPGGEYAWGYCFISEISPPSPHCNLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMT 632 NC SG G T G G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ REIAAFFA HETT + G+ YC + + YPC KYYGRGP+QL+WNYNY ATD SF++A+WFWMT Sbjct: 55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAA--------QYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.609e-18 Identity = 60/177 (33.90%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 102 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPSPHCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWM 629 CG G G D G + I+++E F D + + CP + FYT F+EA A+P FG + R REIAA+FA HET +A YC S+ P CN N +Y+GRGP+QL+WNYNY+ DP++SF++++WFW+ Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPN----KEYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.043e-17 Identity = 61/212 (28.77%), Postives = 94/212 (44.34%), Query Frame = 3 Query: 87 GPARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PHC---NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWMTAQPPKPSCHEVLTDEWKPSANDLN 704 GP G G G G + + E F + + + C + FYT +F+ AA+++ F N REIAAFFA HET C+I+EI+ + +C N +PC+ KYYGRGP+Q++WN+NY A DP +SF++A+WFWM + H+V++ + + +N Sbjct: 58 GPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMSQGFGATIRAIN 248
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.759e-17 Identity = 62/191 (32.46%), Postives = 86/191 (45.03%), Query Frame = 3 Query: 102 CGSGVVCGERDTGHGTDGGELG---------KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PHCNLN---YPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWM 629 C SG G G G GG G + + E F + + + C + FYT +F+ AA ++ F REIAAFFA HET C+I+EI+ S +C+ N +PC+ KYYGRGP+Q++WNYNY A DP +SF++A+WFWM Sbjct: 57 CRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM 232
BLAST of DY260020 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.355e-16 Identity = 59/183 (32.24%), Postives = 82/183 (44.81%), Query Frame = 3 Query: 102 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAPTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PHCN----LNYPCRGK--YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFQSAIWFWM 629 CG+G G T + I F + + + D C + FYT DAF+ A ++ FG G+E REIAA FA HET +C+I EI S +C+ YPC Y+GRGPIQL+WN+NY + D V+SF++A+W+WM Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 The following BLAST results are available for this feature:
BLAST of DY260020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260020 ID=DY260020; Name=DY260020; organism=Citrus clementina; type=EST; length=1058bpback to top |