DY260027

Overview
NameDY260027
Unique NameDY260027
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1062
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT15_ARATH (Probable inorganic phosphate transporter 1-5 OS=Arabidopsis thaliana GN=PHT1-5 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 1.116e-43
Identity = 104/220 (47.27%), Postives = 128/220 (58.18%), Query Frame = 1
Query:   37 KVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADR--FQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFE----ATHTRDNDVNKRQHQADIAWRLILMLGSIPA 678
            +VL ALD+AKTQ YHF AI+IAGMG  TDAYDLF I  + KLLGRIYY   + +    +P  V + +  +A  GT+ GQL FG LGD +GR++VYG             G S   +   V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGILA   V++ V   F+    A     + V     QAD  WR++LM G+IPA
Sbjct:    7 EVLNALDAAKTQMYHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYYHVDSSKKPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGITLMLMVLCSLGSGLSFGHSANGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVSLIVSSTFDHAFKAPTYEVDPVGSTVPQADYVWRIVLMFGAIPA 226          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PHT16_ARATH (Probable inorganic phosphate transporter 1-6 OS=Arabidopsis thaliana GN=PHT1-6 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.749e-42
Identity = 96/219 (43.84%), Postives = 127/219 (57.99%), Query Frame = 1
Query:   40 VLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYS--DGADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFEATHTRD----NDVNKRQHQADIAWRLILMLGSIPA 678
            +L ALD AKTQ+YH  A++++GMG  TD+YDLF I  I KLLGRIYY     +    +P+ + + +  +A  GT IGQ+ FG LGD +GR+RVYG             G S+    + V                 DYPLSATIMSE++NK TRGAFIAAVF MQG GILA+  V++ V  +FE+         +       QAD  WR+ILM+G++PA
Sbjct:    9 ILKALDVAKTQWYHVTAVVVSGMGFFTDSYDLFVISLITKLLGRIYYQVPGSSSPGSLPDGISAAVSGVAFAGTFIGQIFFGCLGDKLGRKRVYGLTLLIMTICSICSGLSLGRDPKTVMVTLCFFRFWLGFGIGGDYPLSATIMSEYSNKRTRGAFIAAVFGMQGIGILAAGAVSLLVSAVFESKFPSRAYILDGAASTVPQADYVWRIILMVGALPA 227          
BLAST of DY260027 vs. ExPASy Swiss-Prot
Match: PT113_ORYSJ (Putative inorganic phosphate transporter 1-13 OS=Oryza sativa subsp. japonica GN=PHT1-13 PE=3 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 3.039e-41
Identity = 101/217 (46.54%), Postives = 125/217 (57.60%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQC-VXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKIFEATHTRDNDVNKRQHQADIAWRLILMLGSIPAA 681
            L+VL ALD A+TQ YHF AI+IAGMG  TDAYDLF I  +  LLG +YY       ++P  + + +  +AL GTV GQLVFG LGD +GR+RVYG             G S    +   +                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFG LA+  + M V   F+         +    + D AWR+ILM G+IPAA
Sbjct:    7 LRVLHALDIARTQLYHFIAIVIAGMGFFTDAYDLFSISLVADLLGHVYYHG-----ELPRNIHAAVTGIALCGTVPGQLVFGWLGDKMGRKRVYGITLLLMVVSSLASGLSFSKHEGMNIIAVLCFFRFWLGVSIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGNLAAGIIGMIVSAAFK---------HSSASKIDYAWRIILMFGAIPAA 209          
The following BLAST results are available for this feature:
BLAST of DY260027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PHT15_ARATH1.116e-4347.27Probable inorganic phosphate transporter 1-5 OS=Ar... [more]
PHT16_ARATH2.749e-4243.84Probable inorganic phosphate transporter 1-6 OS=Ar... [more]
PT113_ORYSJ3.039e-4146.54Putative inorganic phosphate transporter 1-13 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260027 ID=DY260027; Name=DY260027; organism=Citrus clementina; type=EST; length=1062bp
CGGAGATAAGAAAAAAATAAATAAGAATGGGCGTTGAAAGTGCTCCCAGC
GCTAGACTCAGCAAAGACCCAGTACTATCACTTCCAAGCCATAATAATAG
CCGGGATGGGGCTCCTTACCGATGCCTATGACCTCTTCTGTATCCCGCCC
ATCATGAAGCTCCTCGGAAGAATCTACTACAGCGATGGCGCCGATCGATT
CCAAATCCCAAACGCGGTCGTATCGCCGATGTTAGCCCTGGCTTTACTGG
GCACGGTGATAGGGCAGCTGGTCTTCGGCAGACTAGGTGACCTCATCGGA
CGTCGGCGCGTGTACGGATTAGCATTGATGTTGATGGTGCTTAGCTCCCT
TGCATGTGGCTTCTCCATTTGCACCACTAAACAATGCGTCCTCGGGAGTC
TAGGCTTCTTCAGGTTCTTGCTTGGAGTTGGCATCGGCGGGGACTATCCC
TTATCTGCTACCATCATGTCCGAGTTCGCTAACAAGATGACGCGTGGCGC
CTTCATTGCGGCGGTTTTTTCTATGCAGGGCTTTGGTATCTTGGCCAGCT
CTACGGTCACCATGGCGGTTTGCAAAATCTTTGAGGCAACCCACACTCGG
GACAACGATGTCAACAAGAGGCAGCATCAAGCTGATATTGCCTGGAGGTT
GATTCTCATGCTGGGTTCTATTCCGGCTGCTTTCCCTATTATTGGCCTAT
GACGATGCCCTGATCCGCAGATACCCGGCTTTGGTGGACCAAATGTAATG
CACCCGCCAAAAGACTGGAGAAAGTACCAAACGTATCCATAACCCAATTG
CCGAGGAATATCCCTTGCCCCCATTCCCCCCCCTACCCCTATCCCCCAAC
CCTTCCCACCCCCACCCGCCCCCACCTCATCCCCCGCCCCCCCCCGGGGC
GCCCCCCAAACTACCCTCCACGAACCCCCCCCCCCCAACCCAAAACCCCC
CCCCCTACCTTGGGGGCCCCCGGCCCGACCCCACCCCCGGGGCCTTTTTA
AAAACCCCCCCAATTTGAAAAACCCCCACCCTTTTCCCCCTTTTTCCCCC
CCCCCCCGGGTT
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