DY260028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIO_MYCGA (Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.398e-12 Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 35 TKQLVVVDFTASWCGPCPFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELPQTI 283 T + VVVDF A+WCGPC + P E+A+ + F+KVDVD+ +++++ + ++PT +F ++GK+ DK +G K EL + + Sbjct: 16 TNKKVVVDFYANWCGPCKILGPIFEEVAQDKKDWTFVKVDVDQANEISSEYEIRSIPTVIFFQDGKMADKRIGFIPKNELKELL 99
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIO_CYAME (Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.398e-12 Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 32 ETKQLVVVDFTASWCGPCPFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELPQTIAKHL 295 ++++LV+VDF A WCGPC I P L E+AK+ N+ ++V+ DE ++AT + + ++PT M K+G+ VD V+G+ K L TI K+L Sbjct: 15 QSEKLVLVDFWAPWCGPCRMIGPILEEIAKEF-NLKVVQVNTDENPNLATFYGIRSIPTLMLFKKGQRVDTVIGAVPKSILIHTINKYL 102
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIO_CHLPN (Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.398e-12 Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 44 LVVVDFTASWCGPCPFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSK-KEELPQTIAKH 292 LV+VDF A WCGPC + P L LA +LP+V K+++DE A + V ++PT + K+G V +VVG K KE L I KH Sbjct: 18 LVLVDFFAEWCGPCRMLTPILENLAAELPHVTIGKINIDENSKPAETYEVSSIPTLILFKDGNEVARVVGLKDKEFLTNLINKH 101
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.826e-12 Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 50 VVDFTASWCGPCPFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-SKKEELPQTIAKHL 295 +VDF A+WCGPC IAP L ELA LK+DVDE S A + V ++PT + K+G+ VDKVVG KE L + + KHL Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIO_NEUCR (Thioredoxin OS=Neurospora crassa GN=trx PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.826e-12 Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 35 TKQLVVVDFTASWCGPCPFIAPFLAELAK--KLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIV 238 T Q VV DF A WCGPC IAP A+ AK +PN L F K++VD ++ VA + V AMPTF+F K GK V Sbjct: 20 TTQYVVADFYADWCGPCKAIAPMYAQFAKTFSIPNFLAFAKINVDSVQQVAQHYRVSAMPTFLFFKNGKQV 90
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIO_CYACA (Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.826e-12 Identity = 35/89 (39.33%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 35 TKQLVVVDFTASWCGPCPFIAPFLAELAKK-LPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELPQTIAKHL 295 +++LV+VDF A WCGPC I+P + ELA++ + V +K++ DE S++ ++ + ++PT M K+GK VD V+G+ K L + K+L Sbjct: 19 SEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIO_ECHGR (Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 3.115e-12 Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 17 LQKSNETKQLVVVDFTASWCGPCPFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELPQTI 283 L+ + + +L+V DF A+WCGPC +AP L +AK+ V+F+K+DVDE + VA + V AMPT + K G + VVG+ + + + I Sbjct: 15 LEAAIKGDKLLVCDFFATWCGPCKSLAPKLDAMAKENEKVIFVKLDVDECQDVAEKYRVTAMPTLIVFKNGCEIGHVVGANEAGIRELI 103
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIO_CHLCV (Thioredoxin OS=Chlamydophila caviae GN=trxA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.068e-12 Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 2 Query: 44 LVVVDFTASWCGPCPFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSK-KEELPQTIAKH 292 LV++DF A WCGPC + P L L ++ +VL KV++D+ + A + V ++PT + K+GK VD+VVG K K+ L + I +H Sbjct: 18 LVLIDFFAEWCGPCKMLTPVLESLEAEVSSVLIGKVNIDDHPAPAEQYGVSSIPTLILFKDGKEVDRVVGLKDKDSLIRLINQH 101
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIOM_RAT (Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.068e-12 Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 47 VVVDFTASWCGPCPFIAPFLAEL-AKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELPQTIAKHL 295 VVVDF A WCGPC + P L ++ AK+ V+ KVD+D+ +A ++ V A+PT + +K G +VDK VG K E+ + K L Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKL 164
BLAST of DY260028 vs. ExPASy Swiss-Prot
Match: THIOM_MOUSE (Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.068e-12 Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 47 VVVDFTASWCGPCPFIAPFLAEL-AKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELPQTIAKHL 295 VVVDF A WCGPC + P L ++ AK+ V+ KVD+D+ +A ++ V A+PT + +K G +VDK VG K E+ + K L Sbjct: 81 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKL 164 The following BLAST results are available for this feature:
BLAST of DY260028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260028 ID=DY260028; Name=DY260028; organism=Citrus clementina; type=EST; length=1099bpback to top |