DY260029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.606e-16 Identity = 39/87 (44.83%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 299 AQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 559 AQ GE++ GG DPK++ G ++V VT+K YWQ ++ + + N T +C+GGC AIVD+GTSL+ GPT V E+ AIG + ++ + Sbjct: 227 AQPGGELLLGGTDPKYYSGDFSWVNVTRKAYWQVHMDSVDVANGLT-LCKGGCEAIVDTGTSLITGPTKEVKELQTAIGAKPLIKGQ 312
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 6.016e-16 Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 296 DAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 559 + Q GE++ GG D K++ G+ +Y+ VT+K YWQ ++ + +GN+ T +C+GGC AIVD+GTSLL GP V E+ AIG ++ E Sbjct: 236 EGQPGGELMLGGTDSKYYHGELSYLNVTRKAYWQVHMDQLEVGNELT-LCKGGCEAIVDTGTSLLVGPVEEVKELQKAIGAVPLIQGE 322
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 6.016e-16 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 296 DAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG----EGVVSAECKLV 571 D + GE++ GG DPK++ G YVPVT++ YWQ ++ + IG+Q T +C+ GC AIVD+GTSL+ GP V + AIG +G +CK V Sbjct: 224 DTEPGGELLLGGTDPKYYTGDFNYVPVTRQAYWQIHMDGMSIGSQLT-LCKDGCEAIVDTGTSLITGPPAEVRALQKAIGAIPLIQGEYMIDCKKV 318
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.340e-15 Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 296 DAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 559 +AQ GE++ GG D K++KG +Y+ VT+K YWQ ++ + +G+ T +C+GGC AIVD+GTSL+ GP V E+ AIG ++ E Sbjct: 236 NAQPGGELMLGGTDSKYYKGPLSYLNVTRKAYWQVHMEQVDVGSSLT-LCKGGCEAIVDTGTSLIVGPVDEVRELQKAIGAVPLIQGE 322
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.750e-15 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 302 QYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541 QY GE++ GGVDP+ + G+ T+ PVT++ YWQ + + IGNQ+TG C GC AIVD+GT LLA P ++ A G + Sbjct: 223 QYGGELILGGVDPQLYSGQITWTPVTQEVYWQIGIEEFAIGNQATGWCSQGCQAIVDTGTFLLAVPQQYMSAFLQATGAQ 302
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.986e-15 Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 239 VHHRLGDSDEDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 559 + +L D D L AQ GE++ GG+D K++KG Y VT+K YWQ ++ + +G+ T +C+GGC AIVD+GTSL+ G V E+ AIG ++ E Sbjct: 154 MQQKLVDKDIFSFYLNRDPGAQPGGELMLGGIDSKYYKGSLDYHNVTRKAYWQIHMNQVAVGSSLT-LCKGGCEAIVDTGTSLIVGQPEEVRELGKAIGAVPLIQGE 259
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.899e-15 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 296 DAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 559 D + GE++ GG DPK++ G YV VT++ YWQ + + +G+Q +C GGC AIVDSGTSL+ GP+ V + AIG ++ E Sbjct: 224 DTEPGGELLLGGTDPKYYTGDFNYVNVTRQAYWQIRVDSMAVGDQ-LSLCTGGCEAIVDSGTSLITGPSVEVKALQKAIGAFPLIQGE 310
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.651e-15 Identity = 36/83 (43.37%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 559 GE++ GG D +++ G+ +Y+ VT+K YWQ ++ + +G++ T +C+GGC AIVD+GTSLL GP V E+ AIG ++ E Sbjct: 238 GELMLGGTDSRYYHGELSYLNVTRKAYWQVHMDQLEVGSELT-LCKGGCEAIVDTGTSLLVGPVDEVKELQKAIGAVPLIQGE 319
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.651e-15 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 296 DAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 559 DAQ GE++ GG D K++KG +Y+ VT+K YWQ +L + + + T +C+ GC AIVD+GTSL+ GP V E+ AIG ++ E Sbjct: 238 DAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLT-LCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGE 324
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 8.686e-15 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 2 Query: 314 EIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG---EGVVSAEC 562 E+ FGG DP HF G ++PVTK+GYWQ L I +G+ + C GC AIVD+GTSL+ GP + ++ AIG +G + +C Sbjct: 232 ELTFGGYDPSHFSGSLNWIPVTKQGYWQIALDGIQVGD-TVMFCSEGCQAIVDTGTSLITGPPKKIKQLQEAIGATPMDGEYAVDC 316 The following BLAST results are available for this feature:
BLAST of DY260029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260029 ID=DY260029; Name=DY260029; organism=Citrus clementina; type=EST; length=1093bpback to top |