DY260029

Overview
NameDY260029
Unique NameDY260029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1093
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.130e-13
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 2
Query:  266 EDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVS 553
            ED+  +    + +    ++FGG+D  ++ G   +VPV+ +GYWQ  +  I I N  T  C   C A+VD+GTSLLAGPT  +++I   IG      GE ++S
Sbjct:  209 EDLFSVYLSSNGEKGSMVMFGGIDSSYYTGSLNWVPVSHEGYWQITMDSITI-NGETIACADSCQAVVDTGTSLLAGPTSAISKIQSYIGASKNLLGENIIS 309          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.062e-12
Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 2
Query:  215 MGGAGVSGVHHRLGDS---DEDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 604
            +  +G + V   + D     +D+  +    D Q    ++FGG+D  ++ G   +VPV+ +GYWQ ++  I +  ++   C  GC AIVD+GTSLL GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  190 ISSSGATPVFDNIWDQGLVSQDLFSVYLSADDQSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSITMNGEAI-ACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGEMVVSCS---AISSLPDIVFTI 324          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.062e-12
Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 2
Query:  266 EDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 535
            +D+  +    D Q    ++FGG+D  ++ G   +VPV+ +GYWQ  +  + +  Q+   C  GC AIVD+GTSLLAGPT  +  I   IG
Sbjct:  208 QDLFSVYLSSDDQSGSVVMFGGIDSSYYSGNLNWVPVSVEGYWQITVDSVTMNGQAI-ACSDGCQAIVDTGTSLLAGPTNAIANIQSYIG 296          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.062e-12
Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 2
Query:  215 MGGAGVSGVHHRLGDS---DEDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 604
            +  +G + V   + D     +D+  +    D Q    ++FGG+D  ++ G   +VPV+ +GYWQ ++  I +  ++   C  GC AIVD+GTSLL GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  190 ISSSGATPVFDNIWDQGLVSQDLFSVYLSADDQSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSITMNGEAI-ACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGEMVVSCS---AISSLPDIVFTI 324          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.387e-12
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 535
            GE+V GG DP+H++G   YV ++K G WQ  +  + +G  +T +CE GC A+VD+GTS ++GPT  +  I  A+G
Sbjct:  235 GEVVLGGSDPQHYQGNFHYVSISKAGSWQITMKGVSVG-PATLLCEEGCMAVVDTGTSYISGPTSSLQLIMQALG 308          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.387e-12
Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 2
Query:  266 EDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 604
            +D+  +    D Q    ++FGG+D  ++ G   +VPVT +GYWQ  +  I +  ++   C  GC AIVD+GTSLL GPT  +  I   IG      G+ VVS      +S   D+++ +
Sbjct:  210 QDLFSVYLSADDQSGSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGEAI-ACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCS---AISSLPDIVFTI 324          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.387e-12
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  266 EDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 604
            +D+  +    D Q    ++FGG+D  ++ G   +VPV+ +GYWQ ++  I +  ++   C  GC AIVD+GTSLL GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  210 QDLFSVYLSADDQSGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISVDSITMNGEAI-ACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGEMVVSCS---AISSLPDIVFTI 324          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.811e-12
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            G +VFGGVD   + G+  + PVT++ YWQ  + + LIG Q++G C  GC AIVD+GTSLL  P   ++ +  A G +
Sbjct:  212 GAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 288          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPC_HUMAN (Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.811e-12
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            G +VFGGVD   + G+  + PVT++ YWQ  + + LIG Q++G C  GC AIVD+GTSLL  P   ++ +  A G +
Sbjct:  223 GAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 299          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.811e-12
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 2
Query:  317 IVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDL 592
            ++FG +D  ++ G   +VPV+ +GYWQ  +  I +  +S   C  GC AIVD+GTSLLAGPT  ++ I   IG     S E  +  S    L
Sbjct:  211 VIFGDIDSSYYSGSLNWVPVSVEGYWQITVDSITMNGESIA-CSDGCQAIVDTGTSLLAGPTTAISNIQSYIGASEDSSGEVVISCSSIDSL 301          
The following BLAST results are available for this feature:
BLAST of DY260029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PEPA1_RABIT8.130e-1337.25Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA_MACMU1.062e-1231.65Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA_CANFA1.062e-1238.89Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
PEPA1_MACFU1.062e-1231.65Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
RENI_RAT1.387e-1244.00Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
PEPA_HUMAN1.387e-1234.45Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PEPA2_MACFU1.387e-1234.45Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEPC_MACFU1.811e-1244.16Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]
PEPC_HUMAN1.811e-1244.16Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1[more]
PEPA_BOVIN1.811e-1239.13Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260029 ID=DY260029; Name=DY260029; organism=Citrus clementina; type=EST; length=1093bp
CTTCACTTTACCTTGCTTCCAACTCAGCTTCAGCAGAAAACCAAAGAACA
TCCTGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCG
TCCTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGGAGAATTGGCTT
GAAGAAGCGGCGTCCAGATCTTCATAGTCTAAATGCTGCAAGAATAACAA
GAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCGTGCACCATCGT
TTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGAACTTTATGGATGC
TCAATACTTTGGAGAGATTGTTTTTGGTGGTGTTGATCCAAAGCACTTTA
AAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACTGGCAGTTC
AATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTTTGTGAGGG
TGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGCCGGTCCAA
CACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAGGAGTTGTT
AGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTAATATGGGA
TCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCAGATTGGTT
TATGTGCTTTCCATGGCGCTGAATATGTGAGTACTGGGATCCAGACCGTG
GTTGAAAAGGAAACGTATCACCCGGGGATAGTGCTGTGTGCCGTGGCTGT
GAAATGACCGTGGTTTCGGGCCCCAATCCCCTAAAACAAAACCCAACAAA
GGAAAAGTCCTCCGTTATAAAATGACCCTCGCAACGCCCGCCAAATCCCA
AGGGAAAATCATTTATGGACGGGGGCCCCCTTCCACCCTGGCCAAAGGTT
CCTCCCCCCCCGAAAACAAATTTTCCCCCCCCCCCCCAACCCTTAATTCC
GAAACCCCGAAAAGGGATGCCAAATTCCCCCCTCTGGGCTTCCGGGCCTT
CCCCCCCCCCCCCCCCCGGGGGCCCCCCGGGGATCCGGGGGAAGTGTTTC
CCGGGGGGGTTTCCCCCCCCGTTTCCCCCCCCGGGGGAACCCC
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