DY260029

Overview
NameDY260029
Unique NameDY260029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1093
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA3_RABIT (Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.366e-12
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 2
Query:  266 EDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVS 553
            ED+  +    D +    ++FGG+D  ++ G   +VPV+ +GYWQ  L  I +  + T  C   C AIVD+GTSLLAGPT  ++ I   IG      GE +VS
Sbjct:  209 EDLFSVYLSSDDESGSVVMFGGIDSSYYTGSLNWVPVSYEGYWQITLDSITMDGE-TIACADSCQAIVDTGTSLLAGPTSAISNIQSYIGASENSDGEMIVS 309          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 3.090e-12
Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 2
Query:  317 IVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVS 553
            ++ GG+D  ++ G   +VPV+ +GYWQ  L  I +  + T  C GGC AIVD+GTSLL GPT  +  I   IG      GE V+S
Sbjct:  224 VLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGE-TIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVIS 307          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.090e-12
Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 2
Query:  317 IVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAE 559
            ++FGGVDP ++ G+  +VPV+K  YWQ ++  I I N     C+GGC AIVD+GTSLL GP   V  I   I      S E
Sbjct:  225 VMFGGVDPSYYTGELHWVPVSKPLYWQISMDSISI-NGKVIACDGGCQAIVDTGTSLLLGPQDAVLNIQEIIQARRSTSGE 304          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPC_CALJA (Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.035e-12
Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            G ++FGGVD   + G+  + PVT++ YWQ  + + LIG Q++G C  GC AIVD+GTSLL  P   ++    A G +
Sbjct:  223 GAVIFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSAFLEATGAQ 299          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 4.035e-12
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 2
Query:  317 IVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVS 577
            ++FGG+D  ++ G   +VP++ +GYWQ  +  I +  Q+   C G C AIVD+GTSLL+GP   +  I  +IG     +A  ++VVS
Sbjct:  226 VIFGGIDSSYYTGNLNWVPLSSEGYWQITVDSITMNGQAIA-CSGSCQAIVDTGTSLLSGPNNAIANIQKSIGAS--QNANGQMVVS 309          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.035e-12
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 2
Query:  215 MGGAGVSGVHHRLGDSD---EDILPLKNFMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVSAECKLVVSQYGDLIWDL 604
            +  +G + V   + + D   +D+  +    + Q    ++FGG+D  ++ G   +VPV+ +GYWQ  +  I +  ++   C  GC AIVD+GTSLL+GPT  +  I   IG      GE VVS      +S   D+++ +
Sbjct:  189 ISSSGATPVFDNIWNQDLVSQDLFSVYLSSNDQSGSVVMFGGIDSSYYTGSLNWVPVSAEGYWQITVDSITMNGEAI-ACAEGCQAIVDTGTSLLSGPTSPIANIQSYIGASENSNGEMVVSCS---AISSLPDIVFTI 323          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 5.270e-12
Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 2
Query:  317 IVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVS 553
            ++FGG+D  ++ G   +VPV+ +GYWQ  +  + I N  T  C   C AIVD+GTSLL GPT  ++ I   IG      GE V+S
Sbjct:  226 VMFGGIDSSYYTGSLNWVPVSYEGYWQITMDSVSI-NGETIACADSCQAIVDTGTSLLTGPTSAISNIQSYIGASKNLLGENVIS 309          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 5.270e-12
Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 2
Query:  317 IVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVS 553
            ++FGG+D  ++ G   +VPV+ +GYWQ  +  + I N  T  C   C AIVD+GTSLL GPT  ++ I   IG      GE V+S
Sbjct:  226 VMFGGIDSSYYTGSLNWVPVSYEGYWQITMDSVSI-NGETIACADSCQAIVDTGTSLLTGPTSAISNIQSYIGASKNLLGENVIS 309          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: ASP2_BLAGE (Aspartic protease Bla g 2 OS=Blattella germanica PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.883e-12
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 2
Query:  290 FMDAQYFGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 535
            F D ++FGEI+FGG D K+  G+ TYVP+     W+F L  + IG+  T V   G  AI+D+  +++ GP   V  IN AIG
Sbjct:  181 FQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGD--TTVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIG 260          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.533e-11
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            GE+V GG DP+H++G   YV ++K   WQ  +  + +G+ ST +CE GCA +VD+G+S ++ PT  +  I  A+G +
Sbjct:  235 GEVVLGGSDPQHYQGNFHYVSISKTDSWQITMKGVSVGS-STLLCEEGCAVVVDTGSSFISAPTSSLKLIMQALGAK 310          
The following BLAST results are available for this feature:
BLAST of DY260029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PEPA3_RABIT2.366e-1239.22Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA_PIG3.090e-1243.53Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
PAG_HORSE3.090e-1245.68Pregnancy-associated glycoprotein OS=Equus caballu... [more]
PEPC_CALJA4.035e-1242.86Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1[more]
PEPA_SUNMU4.035e-1239.08Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPA_CALJA4.035e-1230.94Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPA4_RABIT5.270e-1242.35Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA2_RABIT5.270e-1242.35Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
ASP2_BLAGE6.883e-1242.68Aspartic protease Bla g 2 OS=Blattella germanica P... [more]
RENI1_MOUSE1.533e-1140.26Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260029 ID=DY260029; Name=DY260029; organism=Citrus clementina; type=EST; length=1093bp
CTTCACTTTACCTTGCTTCCAACTCAGCTTCAGCAGAAAACCAAAGAACA
TCCTGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCG
TCCTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGGAGAATTGGCTT
GAAGAAGCGGCGTCCAGATCTTCATAGTCTAAATGCTGCAAGAATAACAA
GAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCGTGCACCATCGT
TTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGAACTTTATGGATGC
TCAATACTTTGGAGAGATTGTTTTTGGTGGTGTTGATCCAAAGCACTTTA
AAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACTGGCAGTTC
AATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTTTGTGAGGG
TGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGCCGGTCCAA
CACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAGGAGTTGTT
AGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTAATATGGGA
TCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCAGATTGGTT
TATGTGCTTTCCATGGCGCTGAATATGTGAGTACTGGGATCCAGACCGTG
GTTGAAAAGGAAACGTATCACCCGGGGATAGTGCTGTGTGCCGTGGCTGT
GAAATGACCGTGGTTTCGGGCCCCAATCCCCTAAAACAAAACCCAACAAA
GGAAAAGTCCTCCGTTATAAAATGACCCTCGCAACGCCCGCCAAATCCCA
AGGGAAAATCATTTATGGACGGGGGCCCCCTTCCACCCTGGCCAAAGGTT
CCTCCCCCCCCGAAAACAAATTTTCCCCCCCCCCCCCAACCCTTAATTCC
GAAACCCCGAAAAGGGATGCCAAATTCCCCCCTCTGGGCTTCCGGGCCTT
CCCCCCCCCCCCCCCCCGGGGGCCCCCCGGGGATCCGGGGGAAGTGTTTC
CCGGGGGGGTTTCCCCCCCCGTTTCCCCCCCCGGGGGAACCCC
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