DY260029

Overview
NameDY260029
Unique NameDY260029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1093
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.533e-11
Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 535
            GE+V GG D   F G+  +VP+T +GYWQ  +  I +  Q    C  GC AIVD+GTSL+ GP+  + ++ + IG
Sbjct:  225 GELVLGGFDTSRFSGQLNWVPITVQGYWQIQVDSIQVAGQVI-FCSDGCQAIVDTGTSLITGPSGDIEQLQNYIG 298          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.003e-11
Identity = 30/77 (38.96%), Postives = 50/77 (64.94%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            G+IV GG DP+H++G   Y+ + K G WQ  +  + +G+ ST +CE GC A+VD+G S ++G T  + ++  A+G +
Sbjct:  240 GQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGS-STLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK 315          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.003e-11
Identity = 30/77 (38.96%), Postives = 50/77 (64.94%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            G+IV GG DP+H++G   Y+ + K G WQ  +  + +G+ ST +CE GC A+VD+G S ++G T  + ++  A+G +
Sbjct:  240 GQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGS-STLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK 315          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.003e-11
Identity = 30/77 (38.96%), Postives = 50/77 (64.94%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            G+IV GG DP+H++G   Y+ + K G WQ  +  + +G+ ST +CE GC A+VD+G S ++G T  + ++  A+G +
Sbjct:  240 GQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGS-STLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK 315          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.416e-11
Identity = 30/77 (38.96%), Postives = 50/77 (64.94%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            G+IV GG DP+H++G   Y+ + K G WQ  +  + +G+ ST +CE GC A+VD+G S ++G T  + ++  A+G +
Sbjct:  240 GQIVLGGSDPQHYEGNFHYINLIKTGVWQIPMKGVSVGS-STLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK 315          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.416e-11
Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLP 625
            G +V GGVD   + G   + PVT++ YWQ  + + LI ++++G C  GC AIVD+GTSLL  P   ++++  A G +           ++YG+ + D   +  LP
Sbjct:  223 GALVLGGVDSSLYTGDIYWAPVTRELYWQIGIDEFLISSEASGWCSQGCQAIVDTGTSLLTVPQEYMSDLLEATGAQ----------ENEYGEFLVDCDSTESLP 317          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.416e-11
Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 2
Query:  317 IVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG------GEGVVS 553
            ++FGG+D  +F G   +VP++ + YWQ  +  I +  Q    C G C AIVD+GTSLL+GPT  +  I   IG      GE VVS
Sbjct:  225 VMFGGIDSSYFTGNLNWVPLSSETYWQITVDSITMNGQVIA-CSGSCQAIVDTGTSLLSGPTNAIASIQGYIGASQNANGEMVVS 308          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.827e-11
Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 2
Query:  290 FMDAQYFGEIV-FGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 535
            +MD    G ++  G +DP ++ G   +VPVT + YWQF +  + I   +   CEGGC AI+D+GTS L GP+  +  I  AIG
Sbjct:  214 YMDRSGQGSMLTLGAIDPSYYTGSLHWVPVTLQKYWQFTVDSVTISG-AVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIG 295          
BLAST of DY260029 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.610e-11
Identity = 29/77 (37.66%), Postives = 50/77 (64.94%), Query Frame = 2
Query:  311 GEIVFGGVDPKHFKGKHTYVPVTKKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGE 541
            G+IV GG DP+H++G   Y+ + + G WQ  +  + +G+ ST +CE GC A+VD+G S ++G T  + ++  A+G +
Sbjct:  234 GQIVLGGSDPQHYEGNFHYINLIRTGLWQIPMKGVSVGS-STLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK 309          
The following BLAST results are available for this feature:
BLAST of DY260029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
CATE_RANCA1.533e-1142.67Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
RENI_PANTR2.003e-1138.96Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_MACFA2.003e-1138.96Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
RENI_HUMAN2.003e-1138.96Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
RENI_MACMU3.416e-1138.96Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]
PEPC_RABIT3.416e-1134.29Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
PEPA_RHIFE3.416e-1142.35Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
CHYM_SHEEP5.827e-1140.96Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
RENI_CALJA7.610e-1137.66Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260029 ID=DY260029; Name=DY260029; organism=Citrus clementina; type=EST; length=1093bp
CTTCACTTTACCTTGCTTCCAACTCAGCTTCAGCAGAAAACCAAAGAACA
TCCTGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCG
TCCTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGGAGAATTGGCTT
GAAGAAGCGGCGTCCAGATCTTCATAGTCTAAATGCTGCAAGAATAACAA
GAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCGTGCACCATCGT
TTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGAACTTTATGGATGC
TCAATACTTTGGAGAGATTGTTTTTGGTGGTGTTGATCCAAAGCACTTTA
AAGGGAAGCATACCTATGTTCCTGTTACTAAAAAAGGCTACTGGCAGTTC
AATTTGGGAGATATATTAATTGGGAATCAGTCCACAGGTGTTTGTGAGGG
TGGTTGTGCTGCCATTGTGGACTCAGGAACATCCTTACTAGCCGGTCCAA
CACCTGTTGTGACTGAAATCAATCATGCCATTGGTGGTGAAGGAGTTGTT
AGTGCGGAGTGTAAGCTAGTTGTTTCCCAGTATGGGGATTTAATATGGGA
TCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCAGATTGGTT
TATGTGCTTTCCATGGCGCTGAATATGTGAGTACTGGGATCCAGACCGTG
GTTGAAAAGGAAACGTATCACCCGGGGATAGTGCTGTGTGCCGTGGCTGT
GAAATGACCGTGGTTTCGGGCCCCAATCCCCTAAAACAAAACCCAACAAA
GGAAAAGTCCTCCGTTATAAAATGACCCTCGCAACGCCCGCCAAATCCCA
AGGGAAAATCATTTATGGACGGGGGCCCCCTTCCACCCTGGCCAAAGGTT
CCTCCCCCCCCGAAAACAAATTTTCCCCCCCCCCCCCAACCCTTAATTCC
GAAACCCCGAAAAGGGATGCCAAATTCCCCCCTCTGGGCTTCCGGGCCTT
CCCCCCCCCCCCCCCCCGGGGGCCCCCCGGGGATCCGGGGGAAGTGTTTC
CCGGGGGGGTTTCCCCCCCCGTTTCCCCCCCCGGGGGAACCCC
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