DY260032

Overview
NameDY260032
Unique NameDY260032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1003
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260032 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.544e-18
Identity = 59/176 (33.52%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   21 KQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLD--GRGHIVK-WAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGL-----HLERKLERGEVERAIRRVMVDAEGREMRNRAEILKEKL 524
            ++ P+SV+Y SFGS       +  ++A GL  ++V F+W  R          E LP+GF E ++   +G IV+ W PQ ++L H + G F +HCGW S +E M  GVP+I  P   EQ   A+ V D   +G+      + ++L   EV R I+ V++  E +++R +A  + E +
Sbjct:  255 QKEPRSVVYASFGSEYFPSTDEIHDIAIGLLLTEVNFIWAFRLHPDEKMTIEEALPQGFAEEIERNNKGMIVQGWVPQAKILRHGSIGGFLSHCGWGSVVEGMVFGVPIIGVPMAYEQPSNAKVVVDN-GMGMVVPRDKINQRLGGEEVARVIKHVVLQEEAKQIRRKANEISESM 429          
BLAST of DY260032 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.823e-16
Identity = 58/174 (33.33%), Postives = 94/174 (54.02%), Query Frame = 3
Query:   36 SVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVR-PGLVR-GAEWIELLPRGFLEMLDGRGHIVK-WAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERG-----EVERAIRRVMVDAE---GREMRNRAEILKEKL 524
            +VIY SFGS   + + +  E+A GL  + +PF  V+  P  V   AE    LP GFLE +  +G I   W  QQ +LAH + G +  H G++S +E++     ++  P  G+Q++ A+ VS   + G+ + R+ E G     +++ A+ +VMVD E   G+ +R   +  KE L
Sbjct:  274 TVIYCSFGSETFLTDDQVKELALGLEQTGLPFFLVLNFPANVDVSAELNRALPEGFLERVKDKGIIHSGWVQQQNILAHSSVGCYVCHAGFSSVIEALVNDCQVVMLPQKGDQILNAKLVSGDMEAGVEINRRDEDGYFGKEDIKEAVEKVMVDVEKDPGKLIRENQKKWKEFL 447          
The following BLAST results are available for this feature:
BLAST of DY260032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
FLRT_CITMA2.544e-1833.52Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]
UFOG_PETHY1.823e-1633.33Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260032 ID=DY260032; Name=DY260032; organism=Citrus clementina; type=EST; length=1003bp
CTGCATTTCTAGGTTATGACAAACAGGCACCAAAATCTGTAATTTATGTA
AGTTTTGGAAGCATTGCTGCCATTGATGAGACCAAATTTTTGGAAGTAGC
TTGGGGCCTAGCCAACAGCAAGGTGCCATTCTTGTGGGTGGTACGGCCAG
GACTAGTCCGCGGAGCAGAATGGATTGAGCTATTACCACGAGGGTTCTTG
GAAATGTTAGACGGAAGAGGGCATATAGTGAAATGGGCTCCCCAGCAAGA
AGTGCTAGCTCATCCTGCCACCGGAGCATTTTGGACACATTGTGGCTGGA
ATTCGACGTTGGAAAGTATGTGTGAAGGTGTCCCCATGATATGCCAGCCT
TGTCATGGTGAGCAAATGGTGATTGCAAGATATGTTAGTGATGTTTGGAA
AGTTGGTTTGCATTTGGAAAGGAAGCTGGAGAGAGGGGAGGTTGAAAGGG
CAATTAGAAGAGTAATGGTGGATGCCGAGGGGCGGGAAATGAGGAACAGA
GCTGAGATTCTGAAGGAAAAACTGGATCTTTGTACAAAGCAAGGCAGTTC
TTCATATCAATCTCTAGAAAACTTGATTAGTTACATTTTGTCATACTAGA
TTTTCCAATACTTACATCTATCCTTCTAATAAGGGCAGTATGAAAATTAA
AACATGGCCTGTCCCGGCCGTATTCAATGAGATCTTTCTGATTATTTATG
TGATCCCCGTTCCCCCACCCAAGGAGTGAAACTTGAAAGGACTTAATCCA
AACCCCTACCCAGGCCCAATTTTAAATTGTTTAAGGGGAATTTTTTTTTT
TTTTGCCAAAAATTGGGGGGTGTGGAAAAAAAAGCCCAAAAAAAAAGGGA
CCCGCCCCCCCCTTCCAGTCCTCCTTCCCTTAAACCGTGTCCCAAAGTTT
GGGCCTTTTTTTGGGAATTTCCGAACTCCTCACAGGAAAATCCAAAAGTC
CGAATTTGTTATTTGGAAAGCCAAAAAAAAAAACCGCAGTTGGGGTTTTG
GGT
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