DY260033

Overview
NameDY260033
Unique NameDY260033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1003
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: CHI1_RHINI (Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.237e-33
Identity = 87/231 (37.66%), Postives = 122/231 (52.81%), Query Frame = 3
Query:   42 VTLSLIKASQGPRRIAIYWGQNG-----NEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSSGNTQNLISSFNRWASS 701
            +T +L   S     +  YWGQN       +G+L S C +G+   + ++FLNKF  G  PEIN A  C      N     C  V   IK+CQS G+KV+                + +  A+ +WN F GGTS +RP   AV+DGID DIE GS+  +   A F++A  S+G    + AAPQCPFPD  LG+ ++    D+V VQFYN+  C  +SG++ N    +N WA +
Sbjct:   15 ITSTLAAYSSNGVNVMYYWGQNSAGGSNTQGSLVSYCQSGQVDVIILSFLNKFNMGGLPEINLASACEQTFFPNTNLLHCPTVGSDIKTCQSNGVKVLLSLGGAAGSYGFSSDSEGQTFAETIWNLFGGGTSDTRPFDDAVIDGIDLDIEGGSSTGY---AAFVTALRSKG-HFLIGAAPQCPFPDAILGSVIDAVGLDFVNVQFYNN-VCSVASGSSFN-FDVWNDWAKN 239          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: XIP1_ORYSJ (Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.815e-32
Identity = 87/250 (34.80%), Postives = 129/250 (51.60%), Query Frame = 3
Query:   30 LPLLVTLSLIKASQGPRRIA-------IYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS--RPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKK---VYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSSGNTQNLISSFNRWASSLRNGKLFLGPATSS 743
            +PL + L++     GP   A       ++WG+N NEGTL  TC TG Y  V I+F + FG+G+    + +GH        RV+   IK CQS+ I V                  A +VAD +WN  + G      RP G A +DGIDF I+QG+  H+DDLAR L AY+   +    V LTA  +C FPD  +  AL+T LF+ + V+FY+   C Y+      +++ +N+W +      ++LG A ++
Sbjct:   11 VPLAMVLAVSSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVISFYSVFGHGRYWG-DLSGH------DLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADVADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPDHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAAN 253          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: XIP2_ORYSJ (Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.218e-30
Identity = 85/225 (37.78%), Postives = 119/225 (52.89%), Query Frame = 3
Query:   84 IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGG--TSSSRPLG-AAVLDGIDFDIEQGSTLHWDDLARFLSAYSS--RGK-KVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSSGNTQNLISSFNRWASSLRNGKLFLGPATS 740
            +A+YWG++  EG+L   C TG+Y  V I F N FG+G+   ++ +GH   A G        IK CQSRGI V+                 A +VAD LWN +LGG     +RP G  A +DGIDF I+QG   H+DDLAR L  Y+   RG+  V LTA  +C +PD  L  AL TG+F  + V+ +    C      T +   S+ +WA++    K+++G   S
Sbjct:   32 LAVYWGRHKEEGSLREACDTGRYTTVIITFYNAFGHGRY-SLDISGHPLAAVGA------DIKHCQSRGITVLLSIGGQGGAYSLPTNASAADVADNLWNAYLGGHRAGVARPFGDDAAVDGIDFFIDQGGADHYDDLARRLDGYNKYYRGRVGVLLTATTRCSYPDHRLEKALATGVFARIHVRMFGDEQC------TMSPRYSWEKWAAAFPGSKVYIGLVAS 243          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: CHI1_RHIOL (Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.942e-30
Identity = 94/275 (34.18%), Postives = 135/275 (49.09%), Query Frame = 3
Query:   63 ASQGPRRIAIYWGQNGNEGTLTST-----CATGKYAYVNIAFLNKFGNGQTPEINPAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLT-AAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSSGNTQNLISSFNRWASSLRNGK----LFLGPATSSCCPKQRVYSPPMV*LPRYLPRTKRPPSKGGGL 839
            +S GP  +  YWGQN   G+ T       C +G+   V ++FL+ F  G TPEIN +  C      N     C  V   IK CQ +G+KV+                  +  A  +WN F GG+S +RP G AV+DG+D DIE G++  +   A F++A   +    +L  AAPQCPFPD  LG+ LN+  FDYV VQFYN+  C  ++G++ N   +++ WA +    K    +F  P + +      V   PM  L   +P      S  GG+
Sbjct:   25 SSNGPN-VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGTPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGSSDTRPFGDAVIDGVDLDIEGGASTGY---AAFVNALRQKFSSNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN-YCS-ATGSSFN-FDTWDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYV---PMSTLQTIVPSLASEYSSYGGV 289          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: CHI2_RHIOL (Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.430e-30
Identity = 94/275 (34.18%), Postives = 133/275 (48.36%), Query Frame = 3
Query:   63 ASQGPRRIAIYWGQNGNEGTLTST-----CATGKYAYVNIAFLNKFGNGQTPEINPAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLT-AAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSSGNTQNLISSFNRWASSLRNGK----LFLGPATSSCCPKQRVYSPPMV*LPRYLPRTKRPPSKGGGL 839
            +S GP  +  YWGQN   G+ T       C +G+   V ++FL+ F  G  PEIN +  C      N     C  V   IK CQ +G+KV+                  +  A  +WN F GG S +RP G AV+DG+D DIE GS+  +     F++A   +    +L  AAPQCPFPD  LG+ LN+  FDYV VQFYN+  C  ++G++ N   +++ WA +    K    +F  P +S+      V   PM  L   +P      S  GG+
Sbjct:   25 SSHGPN-VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGIPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGNSDTRPFGDAVIDGVDLDIEGGSSTGY---VAFVNALRQKFSSNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN-YCS-ATGSSFN-FDTWDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYV---PMSTLQTIVPSLASKYSSYGGV 289          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: CHI1_CANAL (Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 6.679e-27
Identity = 83/245 (33.88%), Postives = 124/245 (50.61%), Query Frame = 3
Query:   30 LPLLVTLSLIKASQGPRRIAIYWGQN--GNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINP-AGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSSGNTQNLISSFNRWASSLRNG--KLFLG-PATSS 743
            L +L+ +S++ ++     IA YWGQN  G++ TL   C++   + + ++FL+ F N      N  +G  +     C  +   IKSCQ +G  ++                +A   A  LWN F GG  S RP   A++DG DFDIE      +  LA  L  Y S G K  YL+AAPQCP+PD  +G  ++    D+ ++QFYN+    Y S N Q    ++N W++  R    KL+LG P +SS
Sbjct:    5 LIILLAISIVASASN---IAAYWGQNAGGDQQTLGDYCSSSPASIIILSFLDGFPNLSLNFANQCSGTFSSGLAHCSQIGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAVQFAGTLWNKFGGGKDSERPFDDAIVDGFDFDIENKDQTGYAALATQLRKYFSTGTKSYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNN----YCSLNQQ---FNWNSWSNYARGKSIKLYLGLPGSSS 239          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: CHI2_CANAL (Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.654e-26
Identity = 84/232 (36.21%), Postives = 115/232 (49.57%), Query Frame = 3
Query:   81 RIAIYWGQNGNEGT--LTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHC-NPAAGG---CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSR--GKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSSGNTQNLISSFNRWASSL--RNGKLFLG-PATSS 743
            ++A+YWGQNG  G   L   C       V ++FLN F +     +N A  C N    G   C  +   IK+CQS G  V+                 A   AD LWN F  G    RP   AV+DG DFDIE G    + +LA  L    ++   K  +L+AAPQCP+PD  LG  L+    D+ ++QFYN+    Y S N Q    +++++A S   +N KLF+G PATS+
Sbjct:   24 QVALYWGQNGAGGQERLAQYCQETDVDIVLLSFLNLFPDPLN--VNFANQCGNTFESGLLHCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASATKFADTLWNKFGAGEDPERPFDDAVVDGFDFDIEHGGATGYPELATALRGKFAKDTSKNYFLSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNN----YCSINGQFNYDTWSKFADSAPNKNIKLFVGVPATSN 249          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: CHIT_YEAST (Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.787e-25
Identity = 78/229 (34.06%), Postives = 118/229 (51.53%), Query Frame = 3
Query:   84 IAIYWGQN--GNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGG----CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS-RPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSSGNTQNLISSFNRWASSLRNGKLFLG-PATSS 743
            IA+YWGQN  G + +L + C +       ++FLN+F    T  +N A  C+         C  +++ I++CQS G KV+                 A+  A  LW+ F  GT +S RP  +AV+DG DFDIE  + + +  LA  L    + G K+ YL+AAPQCP+PD  +G  L     D+ ++QFYN+  C  S     +   ++ +  S  +N KLFLG P ++S
Sbjct:   29 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQF---PTLGLNFANACSDTFSDGLLHCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENADIDFAFIQFYNN-YCSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSAS 253          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: CHI2_COCP7 (Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.702e-22
Identity = 71/260 (27.31%), Postives = 117/260 (45.00%), Query Frame = 3
Query:   84 IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKF---GNGQTPEINPAGHCNPA------------AGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXD--AKNVADYLWNNFLGGT---SSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG--KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSS--GNTQNLISSFNRWASSLRN-----GKLFLG-PATSSCCPKQRVYSP 773
            +A+YWGQ   +  L+  C    +  + + F+N F   G    P  N    C  +              GC  + + +  C++ G  ++                +  A N AD+LW  F   T   +  RP G A +DG DFDIE+GS   +  + R L     +    + Y++AAPQC  PD++L  A++   FD++++QFYN+P C       N +++  + + W   +R       KLF+G PA+ S   K+   +P
Sbjct:   31 LAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKNGTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYNNPSCSAKRWVTNPKSVTYTVDDWVKYIRKSGNPLAKLFIGLPASKSAAAKEDYLTP 290          
BLAST of DY260033 vs. ExPASy Swiss-Prot
Match: CHI2_COCIM (Endochitinase 2 OS=Coccidioides immitis GN=CTS2 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.702e-22
Identity = 71/260 (27.31%), Postives = 117/260 (45.00%), Query Frame = 3
Query:   84 IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKF---GNGQTPEINPAGHCNPA------------AGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXD--AKNVADYLWNNFLGGT---SSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG--KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNHPPCQYSS--GNTQNLISSFNRWASSLRN-----GKLFLG-PATSSCCPKQRVYSP 773
            +A+YWGQ   +  L+  C    +  + + F+N F   G    P  N    C  +              GC  + + +  C++ G  ++                +  A N AD+LW  F   T   +  RP G A +DG DFDIE+GS   +  + R L     +    + Y++AAPQC  PD++L  A++   FD++++QFYN+P C       N +++  + + W   +R       KLF+G PA+ S   K+   +P
Sbjct:   31 LAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKNGTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYNNPSCSAKRWVTNPKSVTYTVDDWVKYIRKSGNPLAKLFIGLPASKSAAAKEDYLTP 290          
The following BLAST results are available for this feature:
BLAST of DY260033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CHI1_RHINI6.237e-3337.66Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1[more]
XIP1_ORYSJ1.815e-3234.80Xylanase inhibitor protein 1 OS=Oryza sativa subsp... [more]
XIP2_ORYSJ2.218e-3037.78Xylanase inhibitor protein 2 OS=Oryza sativa subsp... [more]
CHI1_RHIOL4.942e-3034.18Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 S... [more]
CHI2_RHIOL8.430e-3034.18Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 S... [more]
CHI1_CANAL6.679e-2733.88Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2[more]
CHI2_CANAL5.654e-2636.21Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1[more]
CHIT_YEAST4.787e-2534.06Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 ... [more]
CHI2_COCP71.702e-2227.31Endochitinase 2 OS=Coccidioides posadasii (strain ... [more]
CHI2_COCIM1.702e-2227.31Endochitinase 2 OS=Coccidioides immitis GN=CTS2 PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260033 ID=DY260033; Name=DY260033; organism=Citrus clementina; type=EST; length=1003bp
CCAGAAACTCCCCCGCAATAGCAACCTTCCTCCCCCTGCTGGTCACTCTG
TCATTGATCAAAGCCTCCCAAGGCCCCCGCCGCATCGCAATCTATTGGGG
CCAAAACGGCAACGAGGGTACCCTCACTTCCACCTGTGCCACAGGCAAAT
ATGCTTATGTCAACATAGCTTTCCTGAACAAGTTTGGCAACGGCCAGACC
CCTGAAATTAACCCTGCCGGCCACTGCAACCCCGCAGCCGGTGGCTGCAG
AGTCGTCAGCGACGCAATCAAGAGTTGTCAGAGCCGAGGCATCAAAGTTA
TGCTTTCCCTCGGAGGTGGGGTTGGTAGCTACTCTTTGGCTTCTGTAGCT
GATGCCAAGAATGTAGCTGATTACTTGTGGAACAATTTCTTGGGGGGAAC
ATCAAGTTCAAGGCCATTAGGTGCTGCTGTGTTGGACGGTATTGATTTTG
ATATTGAGCAAGGCTCAACTTTGCATTGGGATGACCTTGCAAGGTTTCTA
TCAGCATATAGCAGCCGTGGCAAGAAAGTTTACTTAACAGCAGCTCCCCA
GTGCCCATTTCCTGATAGGTTTCTGGGTGCTGCTTTGAACACGGGGCTTT
TTGATTATGTATGGGTTCAGTTTTACAACCACCCACCTTGTCAGTATAGT
TCAGGAAATACCCAGAATCTTATAAGTTCATTTAACAGATGGGCTTCATC
ATTGAGAAATGGGAAGTTGTTTTTGGGGCCTGCCACCAGCTCCTGCTGCC
CCAAGCAGCGGGTATATTCCCCCCCAATGGTGTAACTTCCCAGGTACCTT
CCCCGAACAAAACGCCCCCCCAGTAAGGGCGGTGGTCTGCTTTTGTCCAA
AGTTTTTTGATGAACCAAATGGGTACCCTTCCCCCCCTCCAACCAAGTGT
TTTAAACCAATCCCAACCAAAACCCCCCCTTTACCCCCCAGGAAAAGGCC
AAAAAAAATAAAAAAATGGGCAGGCCCTTGCCGGTAATTTCCCAACCCCC
CCC
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