DY260042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260042 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.758e-14 Identity = 62/186 (33.33%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 247 VFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSLPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPI--EGETKICATSLESMPDFVHGTFRLETKFQVLSTKFL--AQSPTIFQNYTILQVPKPMVA---PQMVACPIMPYPYAILHCPSPMTENKLFRVSLGGDNGKRMETVALC 783 VFF KDL G + ++F + A L R AD++PF+ ++LP +L S S A+ M TL CE + + K C TSLESM +F + + +ST+ + + T Q YT+ + KP+V+ MV C MPY YA+ C + T + V+L G +G R E +A C Sbjct: 97 VFFLEKDLFPGSKITLHFTRGGACA--MVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTR-DIRAVSTEVIGTGAAETPRQEYTV-EAVKPVVSVSGGNMVTCHGMPYAYAVFGCHT--TTATAYAVTLAGADGTRAEALATC 276
BLAST of DY260042 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.296e-11 Identity = 61/194 (31.44%), Postives = 88/194 (45.36%), Query Frame = 1 Query: 250 FFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSLPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMPDFVHGTFRLETKFQVLSTKFLAQSPTIFQNYTILQVPKPMVAPQMVACPIMPYPYAILHCPSPMTENKLFRVSLGGDNGKRM--ETVALCPLETSHWSPKSAPF 825 FF K LK G MP+ K D LPR A LPFS ++ L + F ++DS +AK + L+ CE P GETK C S E M DF T L V +T+ S +I + V + V+C YP + +C S + + +++ + N K VA+C ++TS W P+ F Sbjct: 417 FFREKMLKSGTIMPMPDIK-DKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDF--ATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVT-KSVSCHQTLYPSLLYYCHS-VPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAF 605
BLAST of DY260042 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.296e-11 Identity = 61/194 (31.44%), Postives = 88/194 (45.36%), Query Frame = 1 Query: 250 FFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSLPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMPDFVHGTFRLETKFQVLSTKFLAQSPTIFQNYTILQVPKPMVAPQMVACPIMPYPYAILHCPSPMTENKLFRVSLGGDNGKRM--ETVALCPLETSHWSPKSAPF 825 FF K LK G MP+ K D LPR A LPFS ++ L + F ++DS +AK + L+ CE P GETK C S E M DF T L V +T+ S +I + V + V+C YP + +C S + + +++ + N K VA+C ++TS W P+ F Sbjct: 414 FFREKMLKSGTIMPMPDIK-DKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDF--ATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVT-KSVSCHQTLYPSLLYYCHS-VPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAF 602
BLAST of DY260042 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.296e-11 Identity = 60/194 (30.93%), Postives = 86/194 (44.33%), Query Frame = 1 Query: 250 FFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSLPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMPDFVHGTFRLETKFQVLSTKFLAQSPTIFQNYTILQVPKPMVAPQMVACPIMPYPYAILHCPSPMTENKLFRVSLGGDNGKRM--ETVALCPLETSHWSPKSAPF 825 FF K LK G MP+ K D LPR A LPFS ++ L + F D+S + K + L+ CE P GETK C S E M DF T L V +T+ S ++ + V + V+C YPY + +C S + + +++ + N K VA+C ++TS W P F Sbjct: 415 FFREKMLKSGTIMPMPDIK-DKMPKRSFLPRVIASKLPFSTSKIAELKKIFHAGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDF--ATSVLGRNVVVRTTEDTKGSNGNIMIGSVKGINGGKVT-KSVSCHQTLYPYLLYYCHS-VPKVRVYEADILDPNSKVKINHGVAICHVDTSSWGPSHGAF 603
BLAST of DY260042 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.770e-11 Identity = 62/200 (31.00%), Postives = 85/200 (42.50%), Query Frame = 1 Query: 235 PSTMVFFTLKDLKIGETMPI--YFRKRDPSAYPQALPREEADSLPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMPDFVHGTFRLETKFQVLSTKFLAQSPTIFQNYTILQVPKPMVAPQMVACPIMPYPYAILHCPS-PMTENKLFRVSLGGDNGKRMETVALCPLETSHWSPKSAPF 825 P FF +L G TMP+ K P A+ LPR+ A +PF + + F D+ + KA+ T+ CE P GETK CATS E + DF L V ST A S + + V V + V+C +PY + +C S P + + K VA+C L+TS WSP F Sbjct: 410 PEPGKFFRETELVSGNTMPMPDIKDKMPPRAF---LPRDIAKKIPFKPNAVS---EVFGVPLDTAMGKAVTSTVAECERAPSRGETKRCATSAEDIVDF--AVEMLGNDIVVRSTASTAGSGGQIRLGNVTGVDGGKVT-RSVSCHQSLFPYLVYYCHSVPKVRVYEADIMAADSDQKINHGVAICHLDTSDWSPTHGAF 600
BLAST of DY260042 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.431e-11 Identity = 57/200 (28.50%), Postives = 86/200 (43.00%), Query Frame = 1 Query: 235 PSTMVFFTLKDLKIGETMPI--YFRKRDPSAYPQALPREEADSLPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMPDFVHGTFRLETKFQVLSTKFLAQSPTIFQNYTILQVPKPMVAPQMVACPIMPYPYAILHCPSPMTENKLFRVSLGGDNGKRM-ETVALCPLETSHWSPKSAPF 825 P FF +DL G MP+ + P A+ LPR+ A +PF + L F + + + + + T+ C PP GETK CATS E + DF L +T+ A + + VP + V+C +PY + +C S T L D+ +++ VA+C L+TS WSP F Sbjct: 472 PEPGKFFRERDLVAGNRMPMPDIADRTPPRAF---LPRDIAAKIPFDAAAVSAL---FGAAPGTAMRQVVSSTVAECARPPSRGETKRCATSAEDVVDF--AVEMLGDNVVARATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVYEADILAVDSNQKINHGVAICHLDTSDWSPNHGAF 663 The following BLAST results are available for this feature:
BLAST of DY260042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260042 ID=DY260042; Name=DY260042; organism=Citrus clementina; type=EST; length=972bpback to top |