DY260046

Overview
NameDY260046
Unique NameDY260046
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length767
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260046_ssr1 microsatellite DY260046_ssr1:1..10. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_DROPS (Translationally-controlled tumor protein homolog OS=Drosophila pseudoobscura pseudoobscura GN=Tctp PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.473e-14
Identity = 50/154 (32.47%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFLVGESMHDDGCLVFAYYKE 519
            M +++D++TGDE+ +D++  K +++ +++EV GK + +   ++ + GAN S                 VD+V   RL E  AF DKK +  Y+K ++K +  KL+E   ++ ++FK N+  A K +L +  +LQF  GESM  DG +    Y+E
Sbjct:    1 MKIFKDIITGDEMFADTYKIKLVDD-VVYEVYGKLISREGSEIKLEGANASAEEADEGTDTNVESG--VDVVLNHRLVECFAFGDKKSYTLYLKDYMKKVLAKLAEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYRE 151          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_CHICK (Translationally-controlled tumor protein homolog OS=Gallus gallus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.924e-14
Identity = 51/160 (31.87%), Postives = 81/160 (50.62%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFLVGESMHDDGCLVFAYYKEGATDP 534
            M++Y+D ++ DE+ SD +  +E+ NG+  EVEGK V +    +D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  +L E + E  K  + GA    K +L+   + QF VGE+M+ DG +    ++E    P
Sbjct:    1 MIIYRDCISQDEMFSDIYKIREVANGLCLEVEGKMVTRTEGQIDDSLIGGNASAEGPEGEGTEATVITG-VDIVINHHLQE-TSFTKESYKKYIKDYMKAIKARLEEHKPERVKPFMTGAAEQIKHILANFKNYQFFVGENMNPDGMVALLDFREDGVTP 158          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_USTMA (Translationally-controlled tumor protein homolog OS=Ustilago maydis GN=UM01283 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14
Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  109 LLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFLVGESMHDDGCLVFAYYKEGATDPTFCIW 549
            + SD +  K +E+ +++EV+   +V    DVDIGANPS               +V++IV +FRLQ    FDKK ++ Y+K ++K +  KL+E   +R   F+K      K ++   +D +F  GESM  +G +    Y+E    P    W
Sbjct:    1 MCSDGYEMKLVED-VVYEVDAAKIVVSDGDVDIGANPSAEEAAEALENGAE--QVINIVHSFRLQSTQ-FDKKSYLAYLKGYMKSVKAKLAESNPDRVPAFEKGAAAFAKKIVGSFNDWEFFTGESMDPEGMVALLNYREDGVTPYLVFW 146          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_THEAN (Translationally-controlled tumor protein homolog OS=Theileria annulata GN=TCTP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.312e-14
Identity = 54/162 (33.33%), Postives = 81/162 (50.00%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSFPYKE-IEN----GILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFLVGESMHDDGCLVFAYYKEGATDP 534
            M VY+DL + DE+ SD++ + +  +N     + +EV+   V +G  D  IG N                  VVD+VD F LQ  P   KK + +Y+K++I+ L   L E   ER E FK ++    K +L+   D +F VGES+  +  LV+ YYK     P
Sbjct:    1 MKVYRDLYSNDEVCSDAYDHLDPFDNPDLSSVAFEVKTSKVAKGEEDYGIGYNDEEGGDQMNVDPNVEV--VVDVVDKFALQSLP-LTKKDYSSYIKKYIQRLVATLQEKNPERVEPFKTSVSEFVKHVLANFDDFEFYVGESLDYEAGLVYGYYKGEEVSP 159          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_ASPFU (Translationally-controlled tumor protein homolog OS=Aspergillus fumigatus GN=AFUA_1G16840 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.779e-13
Identity = 52/171 (30.41%), Postives = 86/171 (50.29%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSFPYKEIENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRL-----QEQPAFDKKPFVTYMKRFIKLLTPKLSEE-----RQEIFKKNIEGATKFLLSKLSDLQFLVGESMHDDGCLVFAYYKEGATDPTFCIW 549
            M++Y+D+++GDE+LSD+F  KE++ G+L+E +  K++ +   D+ + GANPS                V DI D FRL     +E     K  F +++K ++K +  KL E+       + FKK    A K +L+   +   L+G SM  D   V   ++E    P   +W
Sbjct:    1 MIIYKDIISGDEVLSDNFKIKEVD-GVLYECDCRKYLKRKNEDIQLEGANPSAEEGDDDAGGDGEEVMVHDIEDQFRLVWLKTEEGMKPSKDAFKSHLKTYMKKVLAKLQEKGVPEAEIDAFKKGAPAAVKKILANYDNYDVLMGHSMDGDAMHVLIDFREDGVTPYATLW 170          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_THEPA (Translationally-controlled tumor protein homolog OS=Theileria parva GN=TCTP PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.629e-13
Identity = 53/162 (32.72%), Postives = 81/162 (50.00%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFLVGESMHDDGCLVFAYYKEGATDP 534
            M VY+DL + DE+ SD++    P+   + + + +EV+   V +G  D  IG N                  VVD+VD F LQ   +  KK + +Y++++I+ L   L E   ER E FK  +    K +L+   D +F VGES+  +  LV+AYYK     P
Sbjct:    1 MKVYKDLYSNDEVCSDAYDHHDPFDNADLSSVAFEVKTSKVPKGEEDYGIGYNDEEGADQMNVDPNVEM--VVDVVDKFGLQSL-SLTKKDYSSYIRKYIQRLVATLQEKNPERVEPFKTTVSDFVKHVLANFEDFEFYVGESLDYEAGLVYAYYKGEEVSP 159          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_WUCBA (Translationally-controlled tumor protein homolog OS=Wuchereria bancrofti PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.379e-12
Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFLVGESM 480
            ML+++D  T DEL SDSFP K ++ G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I+     LLSK     LQF +GE M
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSTEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLATFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIQAWVVSLLSKDRFKQLQFFIGERM 144          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_PLACH (Translationally-controlled tumor protein homolog OS=Plasmodium chabaudi GN=TCTP PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12
Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFLVGESMHDDGCLVFAYYKEGATDPTF 540
            M VY+D+ T DE+ SDS+    P+   E   I +EV+    ++G  D  I  N                  V+DIVD+F+L    +  KK +  Y+K F++ +   L E   +R EIFK   +   K +L+   D +F +GES+  +  L+++YYK     P F
Sbjct:    1 MKVYKDIFTNDEVCSDSYAQEDPFGNPEFREIAFEVKSNKRIKGNDDYGIADNSEDAVEGMGADVEH----VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVEIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRF 159          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_PLAF7 (Translationally-controlled tumor protein homolog OS=Plasmodium falciparum (isolate 3D7) GN=TCTP PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSF----PYKEIE-NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFLVGESMHDDGCLVFAYYKEGATDPTF 540
            M V++D+ T DE+ SDS+    P++  E   I +EV+    ++G  D  I  N                  V+DIVD+F+L    AF KK +  Y+K +++ +   L E   +R EIFK   +   K +L+   D +F +GES+  +  ++++YYK     P F
Sbjct:    1 MKVFKDVFTNDEVCSDSYVQQDPFEVPEFREIAFEVKSNKRIKGNEDYGIADNSEDAVEGMGADVEH----VIDIVDSFQLTST-AFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPFIKHILTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRF 159          
BLAST of DY260046 vs. ExPASy Swiss-Prot
Match: TCTP_BRUMA (Translationally-controlled tumor protein homolog OS=Brugia malayi PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 1
Query:   73 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKL-----SEERQEIFKKNIEGATKFLLSK--LSDLQFLVGESM 480
            ML+++D  T DEL SDSFP K ++ G++WE +G+ VV+   ++ + GANPS               + +D V   RLQE   + D   F +Y K F+K +   +     SE     FK+ I      LLSK     LQF +GE M
Sbjct:    1 MLIFKDAFTDDELASDSFPMKLVD-GLIWEFKGRQVVRREGEIQLAGANPSAEGEDGDEGSEECVERGIDFVLNHRLQEMNCYEDLVTFKSYCKSFMKKVVELMQKNGKSEAEISEFKRKIPAWVVSLLSKDRFKQLQFFIGERM 144          
The following BLAST results are available for this feature:
BLAST of DY260046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
TCTP_DROPS1.473e-1432.47Translationally-controlled tumor protein homolog O... [more]
TCTP_CHICK1.924e-1431.88Translationally-controlled tumor protein homolog O... [more]
TCTP_USTMA5.599e-1432.00Translationally-controlled tumor protein homolog O... [more]
TCTP_THEAN7.312e-1433.33Translationally-controlled tumor protein homolog O... [more]
TCTP_ASPFU2.779e-1330.41Translationally-controlled tumor protein homolog O... [more]
TCTP_THEPA3.629e-1332.72Translationally-controlled tumor protein homolog O... [more]
TCTP_WUCBA1.379e-1235.17Translationally-controlled tumor protein homolog O... [more]
TCTP_PLACH3.072e-1231.10Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAF74.012e-1230.49Translationally-controlled tumor protein homolog O... [more]
TCTP_BRUMA4.012e-1235.17Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260046 ID=DY260046; Name=DY260046; organism=Citrus clementina; type=EST; length=767bp
CTCTCTCTCTCCCTCTCCAGTTTTCTCCGTTGATTGTTTTTCTTTTTTGT
GTTCCCGAGAGAGACTGCAATCATGTTGGTCTATCAAGATCTCCTCACCG
GTGATGAGCTTCTCTCCGACTCTTTTCCCTACAAGGAAATTGAGAATGGG
ATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGT
TGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTG
TTGATGACCAAGCCGTGAAGGTGGTCGACATTGTCGACACATTCAGGCTA
CAGGAGCAACCCGCTTTTGACAAGAAGCCGTTTGTAACATACATGAAGAG
ATTCATCAAGTTGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATAT
TTAAGAAGAATATTGAGGGAGCGACCAAGTTCTTGCTCTCCAAGCTCAGT
GACCTTCAATTCCTTGTTGGGGAGAGCATGCATGATGATGGCTGTCTTGT
CTTTGCTTACTACAAGGAGGGTGCGACCGACCCAACTTTTTGTATATGGC
TGATGCATTGAGGAAGTGAAGTGCTAAGCTGGCTTCAAGAAGAAGTGCCG
CCTGAATTCCAATTTAATTATTGGCCCCGTTATTTTAAGTATCTTTGTGG
CGGTTTACCCCGGACTTGGGCCTGCCGTTTTTATTTTTATTTTGAACAAA
CAAAAGGTTTCCGCCCCTAATTATGGGTTTTAGGTTTGAAATTAATTCCA
AAAAATTAATATTTTTT
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