DY260056

Overview
NameDY260056
Unique NameDY260056
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length931
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_KLEP7 (Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=apt PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.093e-44
Identity = 83/157 (52.87%), Postives = 119/157 (75.80%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L  ERYKD  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIQSIEDYPKPGILFRDVTSLLEDPKAYALSIELLTERYKDAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIDATVKLIRRLGGEVHDAAFIINLFDLGGEQRL 167          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_YERPP (Adenine phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=apt PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 82/160 (51.25%), Postives = 115/160 (71.88%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 584
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_YERPN (Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=apt PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 82/160 (51.25%), Postives = 115/160 (71.88%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 584
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_YERPG (Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=apt PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 82/160 (51.25%), Postives = 115/160 (71.88%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 584
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_YERPE (Adenine phosphoribosyltransferase OS=Yersinia pestis GN=apt PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 82/160 (51.25%), Postives = 115/160 (71.88%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 584
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_YERPA (Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=apt PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 82/160 (51.25%), Postives = 115/160 (71.88%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 584
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_ENT38 (Adenine phosphoribosyltransferase OS=Enterobacter sp. (strain 638) GN=apt PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 82/157 (52.23%), Postives = 119/157 (75.80%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALEMGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRL 167          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_AERHH (Adenine phosphoribosyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=apt PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44
Identity = 82/157 (52.23%), Postives = 114/157 (72.61%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            I ++I+ IPD+PKPGI+F+DIT+L+ +  AF+ TIDL    Y+D+ I+ + G EARGFIFG P+A A+G  FVP+RKP KLP  VI E Y+LEYG D +++H  A+  G++ L+VDDL+ATGGT+ A ++L+ R G  VV+ A +I LP L G  RL
Sbjct:    9 IEASIKTIPDYPKPGILFRDITSLIENADAFKATIDLLANHYRDQGITKIVGTEARGFIFGAPVAYAMGLGFVPVRKPGKLPRAVIEESYALEYGTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVVDAAFIISLPSLGGDARL 165          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_SALHS (Adenine phosphoribosyltransferase OS=Salmonella heidelberg (strain SL476) GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 9.117e-44
Identity = 82/157 (52.23%), Postives = 119/157 (75.80%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y+LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYALEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of DY260056 vs. ExPASy Swiss-Prot
Match: APT_SALTY (Adenine phosphoribosyltransferase OS=Salmonella typhimurium GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.191e-43
Identity = 82/157 (52.23%), Postives = 118/157 (75.16%), Query Frame = 3
Query:  105 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 575
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
The following BLAST results are available for this feature:
BLAST of DY260056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_KLEP74.093e-4452.87Adenine phosphoribosyltransferase OS=Klebsiella pn... [more]
APT_YERPP6.981e-4451.25Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERPN6.981e-4451.25Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERPG6.981e-4451.25Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERPE6.981e-4451.25Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERPA6.981e-4451.25Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_ENT386.981e-4452.23Adenine phosphoribosyltransferase OS=Enterobacter ... [more]
APT_AERHH6.981e-4452.23Adenine phosphoribosyltransferase OS=Aeromonas hyd... [more]
APT_SALHS9.117e-4452.23Adenine phosphoribosyltransferase OS=Salmonella he... [more]
APT_SALTY1.191e-4352.23Adenine phosphoribosyltransferase OS=Salmonella ty... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YB20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260056 ID=DY260056; Name=DY260056; organism=Citrus clementina; type=EST; length=931bp
CTCACTGACTATTTTCGGCGTTTTGAGTAGTGAGTGGTGACTCCACCCCA
CCTCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGC
TGGGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGA
TTATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGA
GATACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGT
TGTTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCAT
TGGCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCT
GGGGAGGTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAAT
GGAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAG
ACGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTT
GAGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCC
AGAGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTG
TAAGCTAAACTTGACCTCCGGTTATGGTTTAAATGCAATGTTTGTGGACC
ATATGGGTTTCTAGTCGCTCGGGCCTCGCCCCAAGCCTTGAGAACCTTCT
AAAACCATCCGGTAATATAAAAGCAATTTCATTGGCTTTCTATTTTATTT
AACACCTTGGGGAAAGAGTGGTGGGGAAGCCGGGTTCCGTCCGCTATTGT
TGGGTTAAAAAATGAAAGGCCTATGAAAAAATTCCCTCCTCCCCTAAACC
CCCGTATTTGAAGCCTTTTCCAATTACCCGGAAATTCCAACCCAAGGGTT
TGTTGAAGGTTCCCTGGGGTGAATTTAAACC
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