DY260062

Overview
NameDY260062
Unique NameDY260062
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1074
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 1.281e-71
Identity = 132/231 (57.14%), Postives = 177/231 (76.62%), Query Frame = 3
Query:  138 GPIVDVLPEKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            G +  V+P    DG  VSGG  S++GK   GY+S  GKRA+MEDFY+ +  +VDGQ + +FGVFDGHGG++ AEY+K++LF +LL+HP+F++DTK+AI + Y+ TD +FLES+  +    GSTASTA+LVG+ L+VANVGDSR +I + G AI +S+DHKP + DER+RIE+AGG VMWAGTWRVGGVLA+SRAFG+ LLK +VV +PEI E  ++   E L+  SDGLW+
Sbjct:    2 GYLSSVIPT---DGSPVSGGGLSQNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESD-SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWD 228          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.185e-71
Identity = 135/221 (61.09%), Postives = 167/221 (75.57%), Query Frame = 3
Query:  168 EDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            E  G   SGG  S +GK   GY+S  GKR++MEDFYD +   VDG+ V +FGVFDGHGG+RAAE++K++LF NL+KHP+  +DTK AI+ETY  TD + L++E    RD GSTASTAILVG+ L VANVGDSR VI + G AI +S DHKP + DER+RIE+AGG VMWAGTWRVGGVLA+SRAFG+ LLK +VVA+PEI E  V+   E L+  SDGLW+
Sbjct:   46 EAAGSPGSGGGFSANGKFSYGYASSPGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDSELLKAETSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWD 266          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 2.116e-66
Identity = 121/204 (59.31%), Postives = 159/204 (77.94%), Query Frame = 3
Query:  216 KLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLW 827
            K   GYSS +GKRATMED+++ + S+V+GQ V  FGVFDGHGG+R AEYLK +LF+NL+ H  F++DTK AI E ++QTD ++L  E    ++ GSTA+TA L+G+ L VANVGDSR V S+ G A+PLS+DHKP R DER+RIE+AGG ++WAGTWRVGG+LA+SRAFG+  LKP+V+AEPEI E +++   E +V  SDGLW
Sbjct:  121 KFSYGYSSLKGKRATMEDYFETRISDVNGQMVAFFGVFDGHGGARTAEYLKNNLFKNLVSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNAGSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDIST-LEFIVVASDGLW 323          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.913e-39
Identity = 94/218 (43.12%), Postives = 135/218 (61.93%), Query Frame = 3
Query:  189 SGGWKSEDGKLRCGYSSFRGK-RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVV--MWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            SG  ++ DG+++ GYS  +GK    MED++  K   +DG  + +F ++DGH G R   YL++HLF N+LK  QF  D + +I   Y++TD   L    D  R  GSTA TAIL+ G  L+VANVGDSR V+S+ G+AI ++ DH+PH   ER  IE  GG V  M     RV G LA+SRAFG+  LK  + ++P++ +  +++  + LV  SDGLW+
Sbjct:   23 SGKGRNNDGEIKFGYSLVKGKANHPMEDYHVSKFVKIDGNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSSDLGRG-GSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEPH--TERLSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWK 237          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.095e-38
Identity = 88/216 (40.74%), Postives = 132/216 (61.11%), Query Frame = 3
Query:  189 SGGWKSEDGKLRCGYSSFRGK-RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVV--MWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGL 824
            SG  ++ +G ++ G+S  +GK   +MED++  K +N +G  + +F +FDGH G   A YL++HLF N+LK  +F+ D + AI++ Y+ TD   L   R      GSTA TAIL+ G  L++ANVGDSR ++S  GKA  +S DH P    ER  IE+ GG V        RV G+LA+SR FG+  LK ++ +EPEI ++ ++   + L+  SDG+
Sbjct:   21 SGKGRNGEGGIKYGFSLIKGKSNHSMEDYHVAKFTNFNGNELGLFAIFDGHKGDHVAAYLQKHLFSNILKDGEFLVDPRRAIAKAYENTDQKILADNRTDLESGGSTAVTAILINGKALWIANVGDSRAIVSSRGKAKQMSVDHDPDDDTERSMIESKGGFVTNRPGDVPRVNGLLAVSRVFGDKNLKAYLNSEPEIKDVTIDSHTDFLILASDGI 236          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.136e-34
Identity = 86/218 (39.45%), Postives = 129/218 (59.17%), Query Frame = 3
Query:  189 SGGWKSEDGKLRCGYSSFRGK-RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVV--MWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            SG  +S++G ++ G+S  +GK    MED++     N+    + +F ++DGH G     YL++ LF N+LK  +F  D + +I++ Y++TD   L +  D  R  GSTA TAIL+ G  L++ANVGDSR V+S  G    +S DH+P    ER  IE+ GG V  +     RV G LA+SRAFG+  LK  + +EP+I E  V+   + L+  SDG+W+
Sbjct:   22 SGKGRSDEGMIKYGFSLVKGKANHPMEDYHVANFINIQDHELGLFAIYDGHMGDSVPAYLQKRLFSNILKEGEFWVDPRRSIAKAYEKTDQAILSNSSDLGRG-GSTAVTAILINGRKLWIANVGDSRAVLSHGGAITQMSTDHEPR--TERSSIEDRGGFVSNLPGDVPRVNGQLAVSRAFGDKGLKTHLSSEPDIKEATVDSQTDVLLLASDGIWK 236          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 6.215e-34
Identity = 90/220 (40.91%), Postives = 130/220 (59.09%), Query Frame = 3
Query:  192 GGWKSEDGKLRCGYSSFRGK-RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGN----HLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVV--MWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            G  K    +++ GY   +GK    MED+   +        + +F +FDGH G    ++L+ HLF+N+LK P+F+++ + AI   YQ TD   LES  +  R  GSTA TAIL+ +    +L VANVGDSR VISK+G A  LS DH+P++  ER  IE  GG V  +     RV G LA++RAFG+  LK  + +EP++ E  ++E  + L+  SDGLW+
Sbjct:   28 GKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQEGEHDLGLFAIFDGHLGHTVPDFLRSHLFDNILKQPEFLSNPQAAIRNAYQLTDAKILESAAELGR-GGSTAVTAILISSENSVNLVVANVGDSRAVISKSGVAKQLSVDHEPNK--ERHSIEKKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSEPDVVEEPIDENTDFLILASDGLWK 244          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.362e-33
Identity = 88/211 (41.71%), Postives = 124/211 (58.77%), Query Frame = 3
Query:  237 SFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQ--------QTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVI-SKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKPF--VVAEPEIPELEVNEGFEP--LVPCSDGLWE 830
            S +G+R  MED +++ T   +     +FG+FDGHGG  AAEY+K  L E L +H Q     K     TYQ          D + LE    +Y + G+T   A+L    L VANVGDSR V+  K G AIPLS DHKP++  ERKRI+ AGG + + G+WRV G+LAMSR+ G+  LK    V+ +P+I   ++++  +P  ++  SDGLW+
Sbjct:   97 SIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSVLTYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDK-LQPEFMILASDGLWD 306          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.872e-33
Identity = 87/211 (41.23%), Postives = 124/211 (58.77%), Query Frame = 3
Query:  237 SFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQ--------QTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVI-SKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKPF--VVAEPEIPELEVNEGFEP--LVPCSDGLWE 830
            S +G+R  MED +++ T   +     +FG+FDGHGG  AAEY+K  L E L +H Q     K     +YQ          D + LE    +Y + G+T   A+L    L VANVGDSR V+  K G AIPLS DHKP++  ERKRI+ AGG + + G+WRV G+LAMSR+ G+  LK    V+ +P+I   ++++  +P  ++  SDGLW+
Sbjct:   97 SIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDK-LQPEFMILASDGLWD 306          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.872e-33
Identity = 93/224 (41.52%), Postives = 125/224 (55.80%), Query Frame = 3
Query:  207 EDGKLRCGYSSFRGK---RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTD------------TKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            EDG+    Y   RGK   R  MED +  K +      V  FGVFDGHGG  AAE++ E++       P+FM +            T+ A+   Y +TD +FL+ E       G+   TA+L    L V+N GD R V+S+AGKA  L+ DH+  R DER+RIEN GG VV + GTWRV G LA+SR  G+  LK +VV++P+   L V+   E L+  SDGLW+
Sbjct:  125 EDGEEFAVYCR-RGKGRRRVEMEDRHVAKVALGGDPKVAFFGVFDGHGGKSAAEFVAENM-------PKFMAEEMCKVDGGDSGETEQAVKRCYLKTDEEFLKREES----GGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHLKQWVVSDPDTTTLGVDSQCEFLILASDGLWD 336          
The following BLAST results are available for this feature:
BLAST of DY260062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
P2C45_ORYSJ1.281e-7157.14Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C59_ORYSJ2.185e-7161.09Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C11_ARATH2.116e-6659.31Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C10_ARATH4.913e-3943.12Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C17_ARATH1.095e-3840.74Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C09_ARATH2.136e-3439.45Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C62_ORYSJ6.215e-3440.91Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
PPM1L_MOUSE2.362e-3341.71Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
PPM1L_HUMAN6.872e-3341.23Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]
P2C32_ORYSJ6.872e-3341.52Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YC07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260062 ID=DY260062; Name=DY260062; organism=Citrus clementina; type=EST; length=1074bp
TTGGATCGTTTACTAGAACCAGGCTGGAATTAAGCAACATAAACAAGAGT
TTGCATGCGGGTCTTCCTGTAGGCTATACTTGGAATCGAGAATTTAGAAA
GAGCTCCAAGATGATGGTTGATTCGGCAGCGAAGCGGGGACCCATTGTCG
ATGTATTACCCGAGAAAGAGGATGACGGTGGTTATGTCAGCGGAGGGTGG
AAAAGTGAAGATGGAAAACTGAGATGTGGATACTCAAGTTTTAGGGGAAA
GAGGGCCACTATGGAGGATTTCTATGACATTAAAACTTCCAATGTTGATG
GGCAAGCTGTCTGCATGTTTGGAGTCTTTGATGGTCATGGTGGTTCCCGT
GCGGCTGAGTATTTGAAGGAGCACCTCTTTGAGAATCTCTTGAAGCATCC
ACAATTTATGACAGACACCAAATTGGCTATAAGTGAAACATATCAACAGA
CTGATGTCGACTTTTTGGAATCTGAAAGAGATACTTACAGGGATGATGGT
TCTACTGCTTCAACGGCTATATTGGTTGGTAACCATCTATATGTTGCCAA
TGTCGGAGATTCTAGGACTGTAATATCCAAGGCTGGTAAAGCAATTCCTC
TTTCTGAGGATCATAAACCCCACAGATGTGATGAGCGGAAGAGAATTGAA
AATGCCGGAGGCGTTGTAATGTGGGCAGGCACTTGGAGAGTAGGAGGTGT
GCTAGCCATGTCTCGTGCTTTTGGTAACCCGCTGCTGAAACCATTTGTCG
TTGCGGAACCTGAGATCCCGGAACTTGAAGTAAATGAAGGATTTGAGCCG
CTTGTGCCTTGCAGTGATGGACTATGGGAATGAGTACCCCATGGAAGATG
CCGGTTGCCCTTGCCCCAACCAGGGGAAAAACCCGAAATCCCCCCCTCGG
AAGTTAACCGAAACCGCCTTTTCCCCCAGGCCGTGGCGGACCACCAAAAC
GTGCTTGGTAGGGGAATTCCCCCCCCTCCCATGGAAAACCCCCCCCAAAC
CCGAATGGGGACCGGGGGTAGGAAATCCCCCTTTTGGGTTGCCGGGGGGC
GAGGGTTTTACCCCCCCCCTTTCG
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