DY260062

Overview
NameDY260062
Unique NameDY260062
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1074
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.175e-24
Identity = 83/227 (36.56%), Postives = 112/227 (49.34%), Query Frame = 3
Query:  234 SSFRGKRATMEDFYDIKTSNV--DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT----------------------DTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVI-SKAGKAIPLSEDHKPHRCDERKRIENAGGVVM--WAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIP--ELEVNEGFEPLVPCSDGLW 827
            +S RG R  MED Y + T +    G  +  +GV+DGHGG  A +++ + L +N++      T                      D   AI   Y  TD +FL          G+ A+TA++    LYV+NVGD R V+ S+ G A  L+ DH P R DER RIE+ GG V    +G WRV   LA+SRAFG+  +K +V  EPE     L  +     LV  SDGLW
Sbjct:  141 ASRRGVRHAMEDGYGVITRHKIEGGSQLAFYGVYDGHGGRAAVDFVADKLGKNVVTAAAAATTMSRHQAAGSSSPSQQRREEEDDVTAAIRAAYLTTDSEFLSQGVR----GGACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGDAGVKQWVTCEPETARVSLAADGDCRFLVLASDGLW 363          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.004e-24
Identity = 75/222 (33.78%), Postives = 118/222 (53.15%), Query Frame = 3
Query:  219 LRCGYSSFRGKRATMEDFY--------DIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLES-ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKPF---------VVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            +R G  S  G R  MED +        +   ++VD + +  +GVFDGHGG  AA Y++++L   +++   F  + +  +  ++ QTD  F E          G+TA TA++ G  L VAN GD R V+S+ G AI +S+DH+    +ERKRIE+ GG V       + G LA++RA G+  L+           + AEPE+  + + +  E L+  SDG+W+
Sbjct:   53 IRSGDWSDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGGKDAAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAERCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYV---DDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWD 271          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.617e-24
Identity = 73/201 (36.32%), Postives = 106/201 (52.74%), Query Frame = 3
Query:  318 FGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYR--DD---------------------------GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            FGV+DGHGG++ A+Y  + +   L +  + + + +L    T +   V + +   D Y   DD                           GSTA  A++  +H+ V+N GDSR V+ +   ++PLS DHKP R DE  RIE AGG V+ W G  RV GVLAMSR+ G+  L+PFV+ +PE+  +      E L+  SDGLW+
Sbjct:  238 FGVYDGHGGAQVADYCHDRIHSALAEEIERIKE-ELCRRNTGEGRQVQWEKVFVDCYLKVDDEVKGKINRPVVGSSDRMVLEAVSPETVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGA-RVSGVLAMSRSIGDQYLEPFVIPDPEVTFMPRAREDECLILASDGLWD 436          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 7.615e-24
Identity = 80/242 (33.06%), Postives = 117/242 (48.35%), Query Frame = 3
Query:  228 GYSSFRGKRATMED-------FYDIKTSNVDGQAVC-------------MFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT---------------KLAISETYQQTDVDF---LESERDTYRDD--GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNPLLKPFVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            G  S  G+R  MED       F+D+    V G A                F V+DGHGG + A Y ++ +   L +  +   D                + A  + + + D +      S       D  GSTA  A++  +H+ VAN GDSR V+ +  + +PLS DHKP+R DE  RIE  GG V+ W G +RV GVLAMSR+ G+  LKP+++  PE+  +   +  + L+  SDGLW+
Sbjct:  126 GLESICGRRPEMEDDYAVVPRFFDLPLWMVAGDAAVDGLDRASFRLPAHFFAVYDGHGGVQVANYCRKRIHAVLTEELRRAEDDACGSDLSGLESKKLWEKAFVDCFSRVDAEVGGNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNREDEYARIEALGGKVIQWNG-YRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWD 366          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.216e-23
Identity = 78/224 (34.82%), Postives = 118/224 (52.68%), Query Frame = 3
Query:  234 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTDVDFLESE--------RDTYRDD---GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLK---------PFVVAEPEIPELEVNEGFEPLVPCSDGLWE*VPH 842
            S  +G R TMED +  K   +  Q V +FGVFDGHGG   A+++++H  + LLK+  F     + A+ ET+ + D   +  E        + T  D+   G TA+ A++  N LYVAN GDSRTV+ +      +S DHKP   +E+ RIE AGG V      RV G L +SRA G+   K           ++A P++ ++E+    + L+   DG++E + H
Sbjct:   27 SEMQGWRNTMEDAHIHKPDVI--QDVSIFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEEALKETFLKMDELLVTPEGQKELNQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRTVLCRNNANYDMSVDHKPDNPEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKRDSKLRVNEQLIIAIPDVKKVELGPQDKFLLLGCDGVFETLNH 245          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.779e-23
Identity = 73/219 (33.33%), Postives = 118/219 (53.88%), Query Frame = 3
Query:  222 RCGYSSFRGKRATMEDFY---DIKTSNVDGQAVC-----MFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD--DGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKP------FVVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            R G  + +G +  MED +   D   +++     C      +GVFDGHGG+ AA ++++++   +++   F    K AI   + + D +F +   D+  D   G+TA TA + G  L +AN GD R V+ + G+AI LS+DHKP+   E+ RIE  GGVV       + G L+++RA G+  +K        +  EPE+ E +++E  E L+   DGLW+
Sbjct:   84 RSGSCAEQGAKQFMEDEHICIDDLVNHLGAAIQCSSLGAFYGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLCVKKAIKSAFLKADYEFAD---DSSLDISSGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVY---DGYLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWD 296          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: PP2C4_PARTE (Probable protein phosphatase 2C 4 OS=Paramecium tetraurelia GN=GSPATT00020181001 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.447e-23
Identity = 81/225 (36.00%), Postives = 122/225 (54.22%), Query Frame = 3
Query:  234 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL--AISETYQQTDVDFL--ESERDTYR----DD-----GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLK---------PFVVAEPEIPELEVNEGFEPLVPCSDGLWE*VPH 842
            S  +G R TMED + I   ++  Q + +FGVFDGHGG   A+++++H  E L K+  F  D K   A+ ET+ + D   L  E +++  +    DD     G TA+ A+   N LYVAN GDSR+V+ +      +S DHKP   +E+ RIE AGG V      RV G L +SRA G+   K           ++A P+I ++E+N+  + L+   DG++E + H
Sbjct:   27 SEMQGWRNTMEDAH-IHVCDLQ-QDLSIFGVFDGHGGKEVAQFVEKHFIEELQKNKNFK-DQKFEDALRETFLKMDELLLTPEGQKEIIQIKGGDDEASYAGCTANVALFHKNVLYVANAGDSRSVLCRNNTNYDMSVDHKPDNYEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKRDSKLRSNEQLIIALPDIKKVELNQTDKFLLMGCDGVFETLDH 245          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.100e-22
Identity = 70/221 (31.67%), Postives = 115/221 (52.04%), Query Frame = 3
Query:  219 LRCGYSSFRGKRATMEDFYDIKTS--------NVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKPF---------VVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            +R G  S  G R  MED +   T         +VD +A+  +GVFDGHGG  AA +++++L   +++   F  + +  +  ++   D  F +    T    G+TA TA++ G  L +AN GD R V+S+ G AI +S DH+P    E+ R+E+ GG V       + G+L ++RA G+  L+           + AEPE+  + + +  E L+  SDG+W+
Sbjct:   64 IRSGDWSDIGGRQYMEDTHVCITDLAKNFGYQSVDNEAISFYGVFDGHGGKDAAHFVRDNLPRIIVEDADFPLELEKVVRRSFVHADNQFAK----TTLSSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYV---DDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWD 277          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.436e-22
Identity = 68/194 (35.05%), Postives = 111/194 (57.22%), Query Frame = 3
Query:  309 VCMFGVFDGHGGSRAAEYLKEH----LFENLLKHPQ-------FMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNPLLKPF---------VVAEPEIPELEVNEGFEPLVPCSDGLWE 830
            +  +GVFDGHGGS A++Y+KE+     FE+ +           F+ + + +  E Y+  D+  +E ER      G+TA TA+++G HL VANVGD R V+ + GKA+ +S DHK     ER+R+E+ GG   + G +  G  LA++RA G+  +K F         ++++P+I ++ + E  E L+   DG+W+
Sbjct:  156 MAFYGVFDGHGGSDASQYIKENAMSLFFEDAVFRQSPSVVDSLFLKELETSHREAYRLADLA-MEDERIVSSSCGTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVEDLGG--YFEGEYLYGD-LAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMILTEEDEFLIMGCDGVWD 345          
BLAST of DY260062 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.876e-22
Identity = 77/224 (34.38%), Postives = 119/224 (53.12%), Query Frame = 3
Query:  234 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTDVDFLESE--------RDTYRDD---GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPHRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG------NPLLKP---FVVAEPEIPELEVNEGFEPLVPCSDGLWE*VPH 842
            S  +G R TMED +  +   V  Q V +FGVFDGHGG   A+++++H  + LLK+  F     + A+ ET+ + D   +  E        + T  D+   G TA+ A++  N LYVAN GDSR+V+ +      +S DHKP   +E+ RIE AGG V      RV G L +SRA G      +  L+P    ++A P++ + E+    + ++   DG++E + H
Sbjct:   27 SEMQGWRNTMEDAHIHRPDIV--QDVSVFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEDALKETFLKMDELLMTPEGAKELNNYKATDTDESYAGCTANVALIHKNTLYVANAGDSRSVLCRNNTNFDMSVDHKPDNNEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKSDSKLRPNEQLIIAFPDVKKTELTPQDKFILMGCDGVFETLNH 245          
The following BLAST results are available for this feature:
BLAST of DY260062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
P2C77_ORYSJ1.175e-2436.56Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C27_ORYSJ2.004e-2433.78Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C07_ARATH2.617e-2436.32Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C53_ORYSJ7.615e-2433.06Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
PP2C2_PARTE2.216e-2334.82Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
P2C27_ARATH3.779e-2333.33Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
PP2C4_PARTE6.447e-2336.00Probable protein phosphatase 2C 4 OS=Paramecium te... [more]
P2C54_ORYSJ1.100e-2231.67Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C43_ARATH1.436e-2235.05Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
PP2C3_PARTE1.876e-2234.38Probable protein phosphatase 2C 3 OS=Paramecium te... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YC07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260062 ID=DY260062; Name=DY260062; organism=Citrus clementina; type=EST; length=1074bp
TTGGATCGTTTACTAGAACCAGGCTGGAATTAAGCAACATAAACAAGAGT
TTGCATGCGGGTCTTCCTGTAGGCTATACTTGGAATCGAGAATTTAGAAA
GAGCTCCAAGATGATGGTTGATTCGGCAGCGAAGCGGGGACCCATTGTCG
ATGTATTACCCGAGAAAGAGGATGACGGTGGTTATGTCAGCGGAGGGTGG
AAAAGTGAAGATGGAAAACTGAGATGTGGATACTCAAGTTTTAGGGGAAA
GAGGGCCACTATGGAGGATTTCTATGACATTAAAACTTCCAATGTTGATG
GGCAAGCTGTCTGCATGTTTGGAGTCTTTGATGGTCATGGTGGTTCCCGT
GCGGCTGAGTATTTGAAGGAGCACCTCTTTGAGAATCTCTTGAAGCATCC
ACAATTTATGACAGACACCAAATTGGCTATAAGTGAAACATATCAACAGA
CTGATGTCGACTTTTTGGAATCTGAAAGAGATACTTACAGGGATGATGGT
TCTACTGCTTCAACGGCTATATTGGTTGGTAACCATCTATATGTTGCCAA
TGTCGGAGATTCTAGGACTGTAATATCCAAGGCTGGTAAAGCAATTCCTC
TTTCTGAGGATCATAAACCCCACAGATGTGATGAGCGGAAGAGAATTGAA
AATGCCGGAGGCGTTGTAATGTGGGCAGGCACTTGGAGAGTAGGAGGTGT
GCTAGCCATGTCTCGTGCTTTTGGTAACCCGCTGCTGAAACCATTTGTCG
TTGCGGAACCTGAGATCCCGGAACTTGAAGTAAATGAAGGATTTGAGCCG
CTTGTGCCTTGCAGTGATGGACTATGGGAATGAGTACCCCATGGAAGATG
CCGGTTGCCCTTGCCCCAACCAGGGGAAAAACCCGAAATCCCCCCCTCGG
AAGTTAACCGAAACCGCCTTTTCCCCCAGGCCGTGGCGGACCACCAAAAC
GTGCTTGGTAGGGGAATTCCCCCCCCTCCCATGGAAAACCCCCCCCAAAC
CCGAATGGGGACCGGGGGTAGGAAATCCCCCTTTTGGGTTGCCGGGGGGC
GAGGGTTTTACCCCCCCCCTTTCG
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