DY260087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-49 Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P+ VAL S L +LP + + ++ ++ PD Y IGG+D Q +E++E +ELP+ EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+ + R + D EVQR +LEL Sbjct: 126 PNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA-QTGADREVQRILLEL 292 HSP 2 Score: 51.9878 bits (123), Expect = 1.112e-49 Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQ+DGF+ +KV+MA NR D LD A +P R+ RKIEF +P Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-49 Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P+ VAL S L +LP + + ++ ++ PD Y IGG+D Q +E++E +ELP+ EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+ + R + D EVQR +LEL Sbjct: 126 PNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA-QTGADREVQRILLEL 292 HSP 2 Score: 51.9878 bits (123), Expect = 1.112e-49 Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQ+DGF+ +KV+MA NR D LD A +P R+ RKIEF +P Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-49 Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P+ VAL S L +LP + + ++ ++ PD Y IGG+D Q +E++E +ELP+ EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+ + R + D EVQR +LEL Sbjct: 126 PNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA-QTGADREVQRILLEL 292 HSP 2 Score: 51.9878 bits (123), Expect = 1.112e-49 Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQ+DGF+ +KV+MA NR D LD A +P R+ RKIEF +P Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.113e-49 Identity = 87/170 (51.18%), Postives = 118/170 (69.41%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVN--LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P VAL D+ ++ LP V ++K + PD TY+ IGGL++QI+E+ E I L + PE FE L I PKGVL+YGPPGTGKTL+ARA A T+ TF++++G +LVQ YIG+G+R+VR+ F +A+E P+IIF+DEID+ G+ R S + GD EVQRTMLEL Sbjct: 107 PGDLVALHKDTNIVFEKLPPDYDMKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYGPPGTGKTLMARACASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTIIFIDEIDAIGAKRSDS-DQTGDREVQRTMLEL 275 HSP 2 Score: 52.373 bits (124), Expect = 1.113e-49 Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQLDGF ++ ++K++ A NR+DILD A + R+ RKIEF +P Sbjct: 276 LNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLP 319
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.449e-49 Identity = 89/168 (52.98%), Postives = 124/168 (73.81%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P RV L + + +LP M+V++ P+ Y+ IGGL++Q++EI+EV+ELP+K PELFE +GI PKG+LLYGPPGTGKTLLA+AVA T+ TFIRV GSELV+K+IGEG+ +V+++F +A+E APSIIF+DEID+ +A+ GD EVQRT+++L Sbjct: 131 PGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAI-AAKRTDALTGGDREVQRTLMQL 297 HSP 2 Score: 40.817 bits (94), Expect = 1.449e-49 Identity = 27/72 (37.50%), Postives = 38/72 (52.78%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQNLLLLPEKSFPKK-ELQAGIHFEENA 782 L ++DGF+A +K++ A NR DILD A +P R R IE P + L K +K L ++ EE A Sbjct: 298 LAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIA 369
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 1.449e-49 Identity = 85/168 (50.60%), Postives = 120/168 (71.43%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P V + DSY++ LPS+ V M+V++ P Y+ IGGL++QI+E+ E I LP+ + F+ LGI PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+ G+ R S +GD EVQRTMLEL Sbjct: 137 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLEL 303 HSP 2 Score: 51.2174 bits (121), Expect = 1.449e-49 Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQNL-LLLPEKSFPKKELQAGIHFEENA 782 LNQLDGF + +IKV+ A NR DILD A + R+ RKIEF P++ + + K + ++FEE A Sbjct: 304 LNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELA 375
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.890e-49 Identity = 84/168 (50.00%), Postives = 116/168 (69.05%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P+ VAL S L +LP + ++ ++ PD Y IGG+D Q +E++E +ELP+ EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+ + R + D EVQR +LEL Sbjct: 126 PNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA-QTGADREVQRILLEL 292 HSP 2 Score: 51.9878 bits (123), Expect = 1.890e-49 Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQ+DGF+ +KV+MA NR D LD A +P R+ RKIEF +P Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.463e-49 Identity = 83/168 (49.40%), Postives = 118/168 (70.24%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P VAL S L +LP + + +++ ++ PD +Y IGGLD Q +E++E +ELP+ EL++ +GI P+GVL+YGPPG GKT+LA+AVA +T +FIRV GSE VQKY+GEG RMVR++F +A+E++PSIIF+DEID+ + R + D EVQR +LEL Sbjct: 122 PGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDA-QTGADREVQRILLEL 288 HSP 2 Score: 52.7582 bits (125), Expect = 2.463e-49 Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQ+DGF+ + +KV+MA NR D LD A +P R+ RKIEF +P Sbjct: 289 LNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 332
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.464e-49 Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 PS VAL+ S L LP + ++L+ ++ P +Y IGG D Q +E++E +ELP+ L++ +GI P+GVLLYGPPGTGKT+LA+AVAHHT FIRV GSE VQKY+GEG R+VR++F +ARE++P+IIF+DEID+ + R + D EVQR ++EL Sbjct: 111 PSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDA-QTGADREVQRILMEL 277 HSP 2 Score: 51.9878 bits (123), Expect = 2.464e-49 Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQ+DGF+ + +KV+MA NR D LD A +P R+ RKIEF +P Sbjct: 278 LNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 321
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 3.212e-49 Identity = 88/168 (52.38%), Postives = 123/168 (73.21%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P + VAL + +LP + V +V + P+ Y IGGL++QI EI+EVIELP+K PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA ++ TFI+V SE QK++GEG+R+VRE+F +AR APSI+F+DEID+ G+ R+ G+ +G+ E+QRT+++L Sbjct: 95 PGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT-SGEREIQRTLMQL 261 HSP 2 Score: 42.743 bits (99), Expect = 3.212e-49 Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 L ++DGF+ + +K++ A NR+DILD A +P R R IE +P Sbjct: 262 LAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLP 305 The following BLAST results are available for this feature:
BLAST of DY260087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260087 ID=DY260087; Name=DY260087; organism=Citrus clementina; type=EST; length=1058bpback to top |