DY260087
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 6.824e-59 Identity = 101/184 (54.89%), Postives = 127/184 (69.02%), Query Frame = 2
Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
K+VV RV + + Y +H+ LP K+ P V +M+VE+ PD TY +GG +QI++++EV+E P+ PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+ G AR G+ GD+EVQRTMLEL
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA-GGDNEVQRTMLEL 302 HSP 2 Score: 53.9138 bits (128), Expect = 6.824e-59 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701
+NQLDGF+ IKVLMA NR D LD A +P R+ RKIEF +P
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 195.667 bits (496), Expect = 6.824e-59 Identity = 101/184 (54.89%), Postives = 127/184 (69.02%), Query Frame = 2
Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
K+VV RV + + Y +H+ LP K+ P V +M+VE+ PD TY +GG +QI++++EV+E P+ PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+ G AR G+ GD+EVQRTMLEL
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA-GGDNEVQRTMLEL 302 HSP 2 Score: 53.9138 bits (128), Expect = 6.824e-59 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701
+NQLDGF+ IKVLMA NR D LD A +P R+ RKIEF +P
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 195.667 bits (496), Expect = 6.824e-59 Identity = 101/184 (54.89%), Postives = 127/184 (69.02%), Query Frame = 2
Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
K+VV RV + + Y +H+ LP K+ P V +M+VE+ PD TY +GG +QI++++EV+E P+ PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+ G AR G+ GD+EVQRTMLEL
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA-GGDNEVQRTMLEL 302 HSP 2 Score: 53.9138 bits (128), Expect = 6.824e-59 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701
+NQLDGF+ IKVLMA NR D LD A +P R+ RKIEF +P
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 195.667 bits (496), Expect = 6.824e-59 Identity = 101/184 (54.89%), Postives = 127/184 (69.02%), Query Frame = 2
Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
K+VV RV + + Y +H+ LP K+ P V +M+VE+ PD TY +GG +QI++++EV+E P+ PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+ G AR G+ GD+EVQRTMLEL
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA-GGDNEVQRTMLEL 302 HSP 2 Score: 53.9138 bits (128), Expect = 6.824e-59 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701
+NQLDGF+ IKVLMA NR D LD A +P R+ RKIEF +P
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 195.667 bits (496), Expect = 6.824e-59 Identity = 101/184 (54.89%), Postives = 127/184 (69.02%), Query Frame = 2
Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
K+VV RV + + Y +H+ LP K+ P V +M+VE+ PD TY +GG +QI++++EV+E P+ PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+ G AR G+ GD+EVQRTMLEL
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA-GGDNEVQRTMLEL 302 HSP 2 Score: 53.9138 bits (128), Expect = 6.824e-59 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701
+NQLDGF+ IKVLMA NR D LD A +P R+ RKIEF +P
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 195.667 bits (496), Expect = 6.824e-59 Identity = 101/184 (54.89%), Postives = 127/184 (69.02%), Query Frame = 2
Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
K+VV RV + + Y +H+ LP K+ P V +M+VE+ PD TY +GG +QI++++EV+E P+ PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+ G AR G+ GD+EVQRTMLEL
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA-GGDNEVQRTMLEL 302 HSP 2 Score: 53.9138 bits (128), Expect = 6.824e-59 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701
+NQLDGF+ IKVLMA NR D LD A +P R+ RKIEF +P
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.512e-58 Identity = 94/168 (55.95%), Postives = 126/168 (75.00%), Query Frame = 2
Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
P V L + ++ + +L P+V++MK+EK P TY +GGLDQQI+EIKE +ELP+ PE +E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G +MVRELF +A E+APSI+F+DEID+ G+ R S S G+ E+QRTMLEL
Sbjct: 149 PGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNS-GGEREIQRTMLEL 315 HSP 2 Score: 55.8398 bits (133), Expect = 1.512e-58 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ 707
LNQLDGF++ +KVLMA NRI+ LD A +P RI RKIEF +P +
Sbjct: 316 LNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDE 361
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.512e-58 Identity = 96/168 (57.14%), Postives = 123/168 (73.21%), Query Frame = 2
Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
P V L + + + +L PLV +MK+EK P TY IGGLD QI+EIKE +ELP+ PE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EH PSI+F+DEID+ G+ R S S G+ E+QRTMLEL
Sbjct: 146 PGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNS-GGEREIQRTMLEL 312 HSP 2 Score: 55.4546 bits (132), Expect = 1.512e-58 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ 707
LNQLDGF++ +KV+MA NRI+ LD A +P RI RKIEF +P +
Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 4.370e-58 Identity = 100/184 (54.35%), Postives = 126/184 (68.48%), Query Frame = 2
Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
K+VV RV + + Y +H+ LP K+ P V +M+VE+ PD TY +GG +QI++++EV+E P+ PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR +IF DEID+ G AR G+ GD+EVQRTMLEL
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA-GGDNEVQRTMLEL 302 HSP 2 Score: 53.9138 bits (128), Expect = 4.370e-58 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701
+NQLDGF+ IKVLMA NR D LD A +P R+ RKIEF +P
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.429e-58 Identity = 100/184 (54.35%), Postives = 125/184 (67.93%), Query Frame = 2
Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568
K+VV RV + + Y + + LP K+ P V +M VE+ PD TY+ +GG +QI++++EV+ELP+ PE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+ G AR G GD+EVQRTMLE+
Sbjct: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-GGDNEVQRTMLEI 295 HSP 2 Score: 53.9138 bits (128), Expect = 7.429e-58 Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 3
Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701
+NQLDGF+A IKVLMA NR D LD A +P R+ RK+EF +P
Sbjct: 296 VNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339 The following BLAST results are available for this feature:
BLAST of DY260087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260087 ID=DY260087; Name=DY260087; organism=Citrus clementina; type=EST; length=1058bpback to top |