DY260087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 6.312e-23 Identity = 53/133 (39.85%), Postives = 85/133 (63.91%), Query Frame = 2 Query: 113 ILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSAR 511 I PS ++ + ++ V ++ IGGL+ ++K+ IE P+K P F +G+ QPKGVLLYGPPG KT L RA+A C+F+ VSG++L ++G+ +++ ++F AR + P+I+F+DEIDS +R Sbjct: 446 IQPSSFRSVIGVTDIKPVG---WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSR 575 HSP 2 Score: 86.2705 bits (212), Expect = 3.355e-16 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 188 IGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA---PSIIFMDEIDS 496 +GGL + ++E++ LP++ P SLG+ P+GVLL GPPG GKT L RAVA T + VS L GE VR +F ARE A P+++F+DE+D+ Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDA 307
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 6.312e-23 Identity = 58/123 (47.15%), Postives = 81/123 (65.85%), Query Frame = 2 Query: 179 YDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSE 544 +D I GL+ +KE + P P+LF G+ +P +G+LL+GPPGTGKT+LARAVA + TF +S S L KY+GE ++VR LF +A++ +PSIIF+DEIDS GSRN ++E Sbjct: 604 WDDIAGLESAKYSLKEAVVYPFLRPDLFR--GLREPVRGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSI------MGSRNNENE 718
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PEX6_PENCH (Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 6.312e-23 Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 161 KVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNG--DSEVQRTMLEL 568 K+P+ +D +GGL + E I+LP++ PELF G+ + G+L YGPPGTGKTLLA+A+A F V G EL+ YIGE VR +F AR+ P ++F DE+DS R G G D V + + EL Sbjct: 1023 KIPNVGWDDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAEL 1159
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 8.244e-23 Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 137 LVNLMKVEKVPDST---YDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTM 559 L N + E V + T +D I G + + ++E++ LP PELF L A +G+LL+GPPG GKT+LA+AVA ++ TF +S + L KY+GEG ++VR LF +ARE PSIIF+DE+DS R R G+ + R + Sbjct: 321 LANFIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLR-APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLRER-----REGEHDASRRL 458
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 8.244e-23 Identity = 61/135 (45.19%), Postives = 85/135 (62.96%), Query Frame = 2 Query: 167 PDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSAR--MQSGSRNGDSEVQRTML 562 P+ ++ I GLD + +KE + PI+ P+LF GI P KG+LLYGPPGTGKTLLA+AVA TF +S S +V K+ G+ ++VR LF +AR HAPS IF+DE++S S R + G G ++ +L Sbjct: 250 PNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFT--GILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELL 382
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.077e-22 Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 2 Query: 176 TYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQ 517 T++ + G+++ +E++EV+E +K P+ F LG PKG+LL GPPGTGKTLLARAVA D F SGSE + ++G G+ +R LF A+ +AP +IF+DE+DS G R++ Sbjct: 279 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIE 391
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.077e-22 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 179 YDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRT 556 +D I GL+ +KE + P P+LF+ G+ +P +G+LL+GPPGTGKT+LARAVA + F +S S L K++GE ++VR LF +A++ +PSIIF+DEIDS SAR G+ + S +T Sbjct: 458 WDDISGLEFAKHSLKEAVVYPFLRPDLFQ--GLREPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSARSSDGNEHETSRRIKT 582
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.077e-22 Identity = 64/137 (46.72%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTML 562 + + P+ +D I L + K +KE + LP+ PE F+ GI +P KGVL+ GPPGTGKTLLA+AVA TF VS S L KY GE ++VR LF MAR +AP+ IF+DEIDS S R S V+ +L Sbjct: 201 ISQNPNIRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELL 335
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 1.077e-22 Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 2 Query: 167 PDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSAR--MQSGSRNGDSEVQRTML 562 P+ ++ I GLD + +KE + PI+ P+LF GI P KG+LLYGPPGTGKTLLA+AVA TF +S S +V K+ G+ ++VR LF +AR HAPS IF+DE++S S R G G ++ +L Sbjct: 249 PNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFT--GILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELL 381
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.406e-22 Identity = 61/155 (39.35%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH---------------HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSTGSARMQSGSRNGDSEVQRTML 562 +E+VPD +Y IGGL +QI++I++ +ELP EL+ + PKGVLLYGPPG GKTL+A+AVA+ F+ + G EL+ K++GE R +R +F ARE A P I+F DE+DS R S + ++ V +L Sbjct: 243 LEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHKELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLL 397 The following BLAST results are available for this feature:
BLAST of DY260087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260087 ID=DY260087; Name=DY260087; organism=Citrus clementina; type=EST; length=1058bpback to top |