DY260087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SPAST_DROSI (Spastin OS=Drosophila simulans GN=spas PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.399e-22 Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 188 IGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQS 520 I G D + ++E++ LP PELF L A KG+LL+GPPG GKTLLARAVA TF+ +S + L KY+G+G ++VR LF +AR PSIIF+DE+DS S R S Sbjct: 485 IAGQDVAKQALQEMVILPSVRPELFTGLR-APAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSS 594
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SPAST_DROSE (Spastin OS=Drosophila sechellia GN=spas PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.399e-22 Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 188 IGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQS 520 I G D + ++E++ LP PELF L A KG+LL+GPPG GKTLLARAVA TF+ +S + L KY+G+G ++VR LF +AR PSIIF+DE+DS S R S Sbjct: 485 IAGQDVAKQALQEMVILPSVRPELFTGLR-APAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSS 594
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 2.399e-22 Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 188 IGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQS 520 I G D + ++E++ LP PELF L A KG+LL+GPPG GKTLLARAVA TF+ +S + L KY+G+G ++VR LF +AR PSIIF+DE+DS S R S Sbjct: 485 IAGQDVAKQALQEMVILPSVRPELFTGLR-APAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSS 594
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.399e-22 Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 188 IGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQS 520 I G D + ++E++ LP PELF L A KG+LL+GPPG GKTLLARAVA TF+ +S + L KY+G+G ++VR LF +AR PSIIF+DE+DS S R S Sbjct: 485 IAGQDVAKQALQEMVILPSVRPELFTGLR-APAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSS 594
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.399e-22 Identity = 63/137 (45.99%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTML 562 + + P+ +D I L + K +KE + LP+ PE F+ GI +P KGVL+ GPPGTGKTLLA+AVA TF VS S L KY GE ++VR LF MAR ++P+ IF+DEIDS S R S V+ +L Sbjct: 200 ISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELL 334
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.399e-22 Identity = 63/137 (45.99%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTML 562 + + P+ +D I L + K +KE + LP+ PE F+ GI +P KGVL+ GPPGTGKTLLA+AVA TF VS S L KY GE ++VR LF MAR ++P+ IF+DEIDS S R S V+ +L Sbjct: 200 ISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELL 334
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 3.133e-22 Identity = 59/129 (45.74%), Postives = 86/129 (66.67%), Query Frame = 2 Query: 179 YDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTML 562 ++ I GL +KE + P P+LF+ G+ +P +G+LL+GPPGTGKT++A+AVA ++ TF VS S L+ KY+GE ++VR LF MA++ +PSIIF+DEIDS +AR S + N S +T L Sbjct: 470 WEDIAGLRNAKNSLKEAVVYPFLRPDLFK--GLREPVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTAR--SDNENESSRRIKTEL 594
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 3.133e-22 Identity = 58/135 (42.96%), Postives = 83/135 (61.48%), Query Frame = 2 Query: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTM 559 V+ P + I G D + ++E++ LP PELF L A +G+LL+GPPG GKT+LA+AVA ++ TF +S + L KY+GEG ++VR LF +ARE PSIIF+DE+DS R R G+ + R + Sbjct: 320 VDSGPTVKFADIAGQDLAKQALQEIVILPSIRPELFTGLR-APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCER-----REGEHDASRRL 448
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: CD48B_ARATH (Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 3.133e-22 Identity = 57/152 (37.50%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 113 ILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 I S V P +N ++P T+D +GGL K++++ +E PIK F +GI+ +G+LL+GPPG KT LA+A A+ +F +S +EL Y+GEG ++R F AR +PSIIF DE D R S N + +R + L Sbjct: 263 IAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTL 414 HSP 2 Score: 87.4261 bits (215), Expect = 1.506e-16 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 2 Query: 188 IGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEID 493 IGG ++ ++ ++E+I P + P +LG+ P+G+LLYGPPGTGKT L RAV D I +S + + + GE +++RE F A HA PS+IF+DEID Sbjct: 24 IGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEID 129
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: SPAST_DROWI (Spastin OS=Drosophila willistoni GN=spas PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 5.343e-22 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 2 Query: 188 IGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSAR 511 I G D + ++E++ LP PELF L A KG+LL+GPPG GKTLLARAVA TF+ +S + L KY+G+G ++VR LF +AR PSIIF+DE+DS S R Sbjct: 504 IAGQDVAKQALQEMVILPSVRPELFTGLR-APAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER 610 The following BLAST results are available for this feature:
BLAST of DY260087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260087 ID=DY260087; Name=DY260087; organism=Citrus clementina; type=EST; length=1058bpback to top |