DY260087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.746e-56 Identity = 91/152 (59.87%), Postives = 119/152 (78.29%), Query Frame = 2 Query: 113 ILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 +L ++ P+VN+MK+EK P TY IGGL++QI+EIKE +ELP+ PEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV G+EL+Q+Y+GEG ++VRELF +A HAPSIIF+DEID+ G R + S G EVQRTMLEL Sbjct: 146 VLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSS-GGRREVQRTMLEL 296 HSP 2 Score: 55.4546 bits (132), Expect = 6.746e-56 Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQLDGF+ N IKV+MA N+I+ LD A +P RI RKIEF +P Sbjct: 297 LNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMP 340
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 1.146e-55 Identity = 94/168 (55.95%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P + + N + IL +V P+V++MKVEK P +Y IGGLD QI+EIKE +ELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A E +PSI+F+DEID+ G+ R + S G+ E+QRTMLEL Sbjct: 154 PGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHS-GGEREIQRTMLEL 320 HSP 2 Score: 53.5286 bits (127), Expect = 1.146e-55 Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQLDGF++ +KV++A NRI+ LD A +P RI RKIEF +P Sbjct: 321 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 364
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.542e-55 Identity = 100/184 (54.35%), Postives = 131/184 (71.20%), Query Frame = 2 Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 K+VV P RVAL + + +LP+ P+V +VE+ P+ +Y+ IGGLD QI+EI+E +ELP+ PELF +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIRV GSE VQKYIGEG+R+VRE+F +A+E APSIIF+DE+D+ +AR + +GD EVQRTM++L Sbjct: 86 KFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAI-AARRTNSDTSGDREVQRTMMQL 268 HSP 2 Score: 45.0542 bits (105), Expect = 2.542e-55 Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPT 704 L +LDGF+ +KV+ A NRIDILD A +P R R IE +PT Sbjct: 269 LAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPT 313
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 4.315e-55 Identity = 92/168 (54.76%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P + + N + IL +V P+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI+F+DEID+ G+ R + S G+ E+QRTMLEL Sbjct: 149 PGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANS-GGEREIQRTMLEL 315 HSP 2 Score: 53.5286 bits (127), Expect = 4.315e-55 Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQLDGF++ +KV++A NRI+ LD A +P RI RKIEF +P Sbjct: 316 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 359
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 7.334e-55 Identity = 92/168 (54.76%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P + + N + IL +V P+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI+F+DEID+ G+ R + S G+ E+QRTMLEL Sbjct: 149 PGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS-GGEREIQRTMLEL 315 HSP 2 Score: 53.5286 bits (127), Expect = 7.334e-55 Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQLDGF++ +KV++A NRI+ LD A +P RI RKIEF +P Sbjct: 316 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 359
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 3.602e-54 Identity = 95/168 (56.55%), Postives = 127/168 (75.60%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P R L S + +LP+ + M++ + P+ TY+ IGGL+ QI+EI+E +ELP+ P+LFE +GI+ PKGVLLYGPPGTGKTLLARAVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ APSIIF+DEID+ G+ R S + +GD EVQRT+++L Sbjct: 114 PGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDS-TTSGDREVQRTLMQL 280 HSP 2 Score: 43.8986 bits (102), Expect = 3.602e-54 Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 L ++DGF+ +K++ A NRIDILD+A +P R R IE +P Sbjct: 281 LAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLP 324
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 4.695e-54 Identity = 102/184 (55.43%), Postives = 129/184 (70.11%), Query Frame = 2 Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 K+VV P +VAL S + +LP+ P V M+V P+ Y IGGL+ QI E+KE +ELP+ PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIR+ GSELVQKYIGEG+RMVRELF +A+E +PSIIF+DEIDS G+ R+ S +GD EVQRT+++L Sbjct: 104 KFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDS-ITSGDREVQRTLVQL 286 HSP 2 Score: 40.817 bits (94), Expect = 4.695e-54 Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPT 704 L ++DGF+ +++L A NR DILD A +P R R I+ +PT Sbjct: 287 LAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPT 331
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 7.985e-54 Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 2 Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 +YVV P TRVAL + + LP +V PLV M E + +Y IGGL +QI+E++EVIELP+ PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+ G R G+ + D E+QRT++EL Sbjct: 78 RYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMEL 260 HSP 2 Score: 49.6766 bits (117), Expect = 7.985e-54 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQNLLL 719 LNQ+DGF+ +++K++MA NR D LD A +P R+ RKI +P + L Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARL 310
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 7.985e-54 Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 2 Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 +YVV P TRVAL + + LP +V PLV M E + +Y IGGL +QI+E++EVIELP+ PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+ G R G+ + D E+QRT++EL Sbjct: 78 RYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMEL 260 HSP 2 Score: 49.6766 bits (117), Expect = 7.985e-54 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQNLLL 719 LNQ+DGF+ +++K++MA NR D LD A +P R+ RKI +P + L Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARL 310
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 7.985e-54 Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 2 Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 +YVV P TRVAL + + LP +V PLV M E + +Y IGGL +QI+E++EVIELP+ PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+ G R G+ + D E+QRT++EL Sbjct: 78 RYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMEL 260 HSP 2 Score: 49.6766 bits (117), Expect = 7.985e-54 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQNLLL 719 LNQ+DGF+ +++K++MA NR D LD A +P R+ RKI +P + L Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARL 310 The following BLAST results are available for this feature:
BLAST of DY260087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260087 ID=DY260087; Name=DY260087; organism=Citrus clementina; type=EST; length=1058bpback to top |