DY260087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.549e-52 Identity = 90/168 (53.57%), Postives = 127/168 (75.60%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P RV L + + +LP + M++E+ PD +++ IGGL+ QI++IKEV+ELP+K PELFE +GI PKGVLLYGPPGTGKTLLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID+ S R +S GD EVQRT+++L Sbjct: 109 PGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTES-LTGGDREVQRTLMQL 275 HSP 2 Score: 42.3578 bits (98), Expect = 5.549e-52 Identity = 25/71 (35.21%), Postives = 38/71 (53.52%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQNLLLLPEKSFPKKELQAGIHFEENA 782 L ++DGF++ +K++ A NR DILD A +P R R IE +P ++ L K +K G+ E A Sbjct: 276 LAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKGVDLREVA 346
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.549e-52 Identity = 87/168 (51.79%), Postives = 120/168 (71.43%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 PS VAL S L +LP + ++L+ + PD +Y+ IGG D Q +EI+E +ELP+ EL++ +GI P+GVLLYGPPGTGKT+LA+AVA+HT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+ +AR + D EVQR ++EL Sbjct: 116 PSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDA-QTGADREVQRILMEL 282 HSP 2 Score: 53.9138 bits (128), Expect = 5.549e-52 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQ+DGF+ T +KV+MA NR D LD A +P R+ RKIEF +P Sbjct: 283 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 326
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 7.228e-52 Identity = 88/168 (52.38%), Postives = 120/168 (71.43%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P V + DSY++ LP++ V M+V++ P Y IGGLD+QI+E+ E I LP+ E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+ G+ R S + GD EVQRTMLEL Sbjct: 147 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS-EKAGDREVQRTMLEL 313 HSP 2 Score: 52.7582 bits (125), Expect = 7.228e-52 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ 707 LNQLDGF+ ++KV+ A NR+DILD A + R+ RKIEF +P + Sbjct: 314 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 359
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 173.326 bits (438), Expect = 7.228e-52 Identity = 88/168 (52.38%), Postives = 120/168 (71.43%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P V + DSY++ LP++ V M+V++ P Y IGGLD+QI+E+ E I LP+ E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+ G+ R S + GD EVQRTMLEL Sbjct: 147 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS-EKAGDREVQRTMLEL 313 HSP 2 Score: 52.7582 bits (125), Expect = 7.228e-52 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ 707 LNQLDGF+ ++KV+ A NR+DILD A + R+ RKIEF +P + Sbjct: 314 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 359
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.233e-52 Identity = 90/168 (53.57%), Postives = 127/168 (75.60%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P RV L + + +LP + M++E+ PD +++ IGGL+ QI++IKEV+ELP+K PELFE +GI PKGVLLYGPPGTGKTLLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID+ S R +S GD EVQRT+++L Sbjct: 109 PGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTES-LTGGDREVQRTLMQL 275 HSP 2 Score: 41.9726 bits (97), Expect = 7.233e-52 Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQN 710 L ++DGF++ +K++ A NR DILD A +P R R IE +P ++ Sbjct: 276 LAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDED 322
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 9.425e-52 Identity = 87/168 (51.79%), Postives = 121/168 (72.02%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P V + DSY++ LPS+ V M+V++ P Y+ IGGL++QI+E+ E I LP+ E FE LGI PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F++A+E +P IIF+DEID+ G+ R S +GD EVQRTMLEL Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLEL 297 HSP 2 Score: 55.0694 bits (131), Expect = 9.425e-52 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ----NLLLLPEKSFPKKELQAGIHFEENA 782 LNQLDGF + ++IKV+ A NR DILD A + R+ RKIEF PT+ +L + + K + A ++FEE A Sbjct: 298 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSR---KMNVNADVNFEELA 369
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.432e-52 Identity = 87/168 (51.79%), Postives = 124/168 (73.81%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P VAL + +LP K P+V M++ + P+ TY IGGL++QI+E++EV+ELP+K PE+F +G+ PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+ G+ R+ G+ +G+ E+QRT+++L Sbjct: 95 PGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQL 261 HSP 2 Score: 44.2838 bits (103), Expect = 9.432e-52 Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 L +LDGF+ + +K++ A NRIDILD A +P R R IE +P Sbjct: 262 LAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.228e-51 Identity = 88/168 (52.38%), Postives = 119/168 (70.83%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P V + DSY++ LP+ V M+V++ P Y IGGLD+QI+E+ E I LP+ E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+ G+ R S + GD EVQRTMLEL Sbjct: 150 PGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS-EKAGDREVQRTMLEL 316 HSP 2 Score: 52.7582 bits (125), Expect = 1.228e-51 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ 707 LNQLDGF+ ++KV+ A NR+DILD A + R+ RKIEF +P + Sbjct: 317 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 362
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.229e-51 Identity = 88/168 (52.38%), Postives = 120/168 (71.43%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P V + DSY++ LP++ V M+V++ P Y IGGLD+QI+E+ E I LP+ E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+ G+ R S + GD EVQRTMLEL Sbjct: 131 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS-EKAGDREVQRTMLEL 297 HSP 2 Score: 51.9878 bits (123), Expect = 1.229e-51 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ 707 LNQLDGF+ ++KV+ A NR+DILD A + R+ RKIEF +P + Sbjct: 298 LNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 343
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.229e-51 Identity = 95/184 (51.63%), Postives = 130/184 (70.65%), Query Frame = 2 Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 ++VV P TRVAL + + ILP+ P V +V + P+ TY+ IGGL +Q++E++E IELP+K PELFE +GI PKGVLLYGPPG GKTL+A+A+AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+ G+ R+ + G+ EV RT+++L Sbjct: 82 RFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDE-TTGGEREVNRTLMQL 264 HSP 2 Score: 41.2022 bits (95), Expect = 1.229e-51 Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 L ++DGF+ +KV+ A NR DILD A +P R R IE +P Sbjct: 265 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 308 The following BLAST results are available for this feature:
BLAST of DY260087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260087 ID=DY260087; Name=DY260087; organism=Citrus clementina; type=EST; length=1058bpback to top |