DY260087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 6.030e-51 Identity = 89/184 (48.37%), Postives = 118/184 (64.13%), Query Frame = 2 Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 +YVV TRV L + + LP +V P+V M E + +Y +GGL QI+E++E IELP+ PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID+ G R G+ + D E+QRT++EL Sbjct: 84 RYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMEL 266 HSP 2 Score: 53.1434 bits (126), Expect = 6.030e-51 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ 707 LNQLDGF+ K+K++MA NR D+LD A +P R+ RKIE +P + Sbjct: 267 LNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE 312
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 7.856e-51 Identity = 83/168 (49.40%), Postives = 119/168 (70.83%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P V + DSY++ LP + V M++++ P Y IGGLD+QI+E+ E + LP+ E FES+GI PKGVL+YGPPGTGKTLLARA A T+ T+++++G +LVQ +IG+G+++VR+ F +A+E P+IIF+DE+D+ G+ R S +GD EVQRTMLEL Sbjct: 129 PGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDS-EVSGDREVQRTMLEL 295 HSP 2 Score: 53.9138 bits (128), Expect = 7.856e-51 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ----NLLLLPEKSFPKKELQAGIHFEENA 782 LNQLDGF + IKV+ A NRIDILD A + R+ RKIEF +P + ++L + + K + A ++F+E A Sbjct: 296 LNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSR---KMNVSADVNFDELA 367
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 7.862e-51 Identity = 91/184 (49.46%), Postives = 122/184 (66.30%), Query Frame = 2 Query: 17 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 +YVV RV+L + + ILP +V PLV M +E D ++ +GGL++QI+E++EVIELP+K PELF +GI PKGVLLYGPPGTGKTLLARAVA F++V S +V KYIGE +R++RE+F A+EH P +IFMDEID+ G R G+ + D E+QRT++EL Sbjct: 77 RYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGT-SADREIQRTLMEL 259 HSP 2 Score: 48.521 bits (114), Expect = 7.862e-51 Identity = 22/46 (47.83%), Postives = 31/46 (67.39%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQ 707 LNQ+DGF+ + K++MA NR D LD A +P R+ RKIE +P + Sbjct: 260 LNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 305
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.024e-50 Identity = 90/183 (49.18%), Postives = 122/183 (66.67%), Query Frame = 2 Query: 20 YVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 YVV PS+ VAL S L ILP + + ++ + PD TY +GGLD Q +EI+E +ELP+ +L++ +GI P+GVLLYGPPGTGKT+L +AVA+ T +FIRV+GSE VQKY+GEG RMVR++F MARE++P+IIF+DEID+ + R + D EVQR +LEL Sbjct: 112 YVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDA-QTGADREVQRILLEL 293 HSP 2 Score: 51.9878 bits (123), Expect = 1.024e-50 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEF 692 LNQ+DGFE ++ +KV+MA NR D LD A +P R+ RKIEF Sbjct: 294 LNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEF 334
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.335e-50 Identity = 93/168 (55.36%), Postives = 123/168 (73.21%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P +VAL + + ++PS P V M+V + + YD IGGLD+QI+E++E +ELP+ PE F +GI PKGVLLYG PGTGKTLLA+AVAH T+ TFIRV GSELVQKYIG+GS++VRE+F MAR+ APSIIF+DE+DS + R+ + D EVQRT+++L Sbjct: 120 PGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNE-TTGADREVQRTLMQL 286 HSP 2 Score: 36.965 bits (84), Expect = 1.335e-50 Identity = 16/44 (36.36%), Postives = 26/44 (59.09%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 L ++DGF+ I+++ A NR D+LD A +P R R + +P Sbjct: 287 LAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMP 330
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.268e-50 Identity = 90/168 (53.57%), Postives = 124/168 (73.81%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P RV L + + +LP + M++E+ PD + IGGL+ QI++IKEV+ELP+K PELFE +GI PKGVLLYGPPGTGKTLLA+AVA T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID+ S R +S GD EVQRT+++L Sbjct: 109 PGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTES-LTGGDREVQRTLMQL 275 HSP 2 Score: 40.817 bits (94), Expect = 2.268e-50 Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQN 710 L ++DGF++ +K++ A NR DILD A +P R R IE P ++ Sbjct: 276 LAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDED 322
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 2.956e-50 Identity = 93/168 (55.36%), Postives = 123/168 (73.21%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P +VAL + + ++PS P V M+V + + YD IGGLD+QI+E++E +ELP+ PE F +GI PKGVLLYG PGTGKTLLA+AVAH T+ TFIRV GSELVQKYIG+GS++VRE+F MAR+ APSIIF+DE+DS + R+ + D EVQRT+++L Sbjct: 120 PGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNE-TTGADREVQRTLMQL 286 HSP 2 Score: 36.965 bits (84), Expect = 2.956e-50 Identity = 16/44 (36.36%), Postives = 26/44 (59.09%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 L ++DGF+ I+++ A NR D+LD A +P R R + +P Sbjct: 287 LAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMP 330
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 3.853e-50 Identity = 85/168 (50.60%), Postives = 119/168 (70.83%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P V + DSY++ LPS+ V M+V++ P Y IGGL++QI+E+ E I LP+ E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+ G+ R S +GD EVQRTMLEL Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLEL 297 HSP 2 Score: 53.1434 bits (126), Expect = 3.853e-50 Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIPTQNL-LLLPEKSFPKKELQAGIHFEENA 782 LNQLDGF + ++IKV+ A NR DILD A + R+ RKIEF PT+ + + K + ++FEE A Sbjct: 298 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELA 369
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.544e-50 Identity = 94/185 (50.81%), Postives = 122/185 (65.95%), Query Frame = 2 Query: 20 YVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARM--QSGSRNGDSEVQRTMLEL 568 YVV PS VAL S L ILP +++M + PD TY +GGLD Q +EI+E +ELP+ +L+E +GI P+GVLLYGPPGTGKT+L +AVA+ T FIRV+GSE V KY+GEG RMVR++F +ARE+APSIIF+DE+DS + R Q+GS D EVQR ++EL Sbjct: 118 YVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS---DREVQRILIEL 299 HSP 2 Score: 48.1358 bits (113), Expect = 6.544e-50 Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEF 692 L Q+DGF+ + +KV+MA NR D LD A +P R+ RKIEF Sbjct: 300 LTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEF 340
BLAST of DY260087 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-49 Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 2 Query: 65 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLEL 568 P+ VAL S L +LP + + ++ ++ PD Y IGG+D Q +E++E +ELP+ EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+ + R + D EVQR +LEL Sbjct: 126 PNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA-QTGADREVQRILLEL 292 HSP 2 Score: 51.9878 bits (123), Expect = 1.112e-49 Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 3 Query: 570 LNQLDGFEATNKIKVLMAKNRIDILDQAPSQPRRIGRKIEFQIP 701 LNQ+DGF+ +KV+MA NR D LD A +P R+ RKIEF +P Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336 The following BLAST results are available for this feature:
BLAST of DY260087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260087 ID=DY260087; Name=DY260087; organism=Citrus clementina; type=EST; length=1058bpback to top |