DY260088

Overview
NameDY260088
Unique NameDY260088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_STRE4 (Bifunctional purine biosynthesis protein purH OS=Streptococcus equi subsp. equi (strain 4047) GN=purH PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.145e-47
Identity = 102/231 (44.16%), Postives = 152/231 (65.80%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKIL 801
            K+ALIS+SDK+ +  L   L+ LG+ I+STGGT  +LE  GV    ++ +T FPEM+DGRVKTLHP IHGG+LARRD +HH+ A  ++ I   DLVVVNLYPF + +     + ++  ++ +DIGGP+++R+AAKNH  V VVVD  DYP +L E         Q R+ LA KAF+H A+YD+ ++++  +Q AGE K   ++ + +   K S  + ++PQ+A  + ++ L
Sbjct:    3 KRALISVSDKRGIVDLARELKHLGWDIISTGGTRLALEEAGVVTVAIDDVTGFPEMMDGRVKTLHPLIHGGLLARRDIEHHLQAAKQNRIELIDLVVVNLYPFKETICRP-DVTYDVAVDMVDIGGPSLLRSAAKNHASVTVVVDPTDYPLVLGELASTGSTSYQTRQSLAAKAFRHTAAYDAVIADYFTRQ-AGETK--PEKLTLTYDLKQSMRYGENPQQAADFYQRAL 229          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_NEIG1 (Bifunctional purine biosynthesis protein purH OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=purH PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.221e-47
Identity = 102/196 (52.04%), Postives = 121/196 (61.73%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAG 693
            K+ALISLSDK         L +LG  I+STGGTA  L   GV V +V   T FPEMLDGRVKTLHP IHGGIL RRD   H+  + EHGIG  DLV VNLYPF   +    G   ED IENIDIGGP M+R+AAKN K V +V D+ D+PA+   L+ N      + R  L+ KAF H A YD  +S +L   + G
Sbjct:    5 KRALISLSDKAGAVEFAQNLHKLGVEILSTGGTAKLLAGAGVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCVNLYPFAATIAKP-GCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELEANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDG 199          

HSP 2 Score: 24.2534 bits (51), Expect = 2.221e-47
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH++ AF
Sbjct:  226 YGENPHQRAAF 236          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_NEIG2 (Bifunctional purine biosynthesis protein purH OS=Neisseria gonorrhoeae (strain NCCP11945) GN=purH PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.802e-47
Identity = 110/236 (46.61%), Postives = 135/236 (57.20%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*K---------SPQKACFY 786
            K+ALISLSDK         L +LG  I+STGGTA  L + GV V +V   T FPEMLDGRVKTLHP IHGGIL RRD   H+  + EHGIG  DLV VNLYPF   +    G   ED IENIDIGGPAM+R+AAKN K V +V D+ D+PA+   L+ N      + R  L+ KAF H A YD  +S +L   +  +D    +        +F+  W K           Q+A FY
Sbjct:    5 KRALISLSDKAGAVEFAQNLHKLGVEILSTGGTAKLLADAGVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCVNLYPFAATIAKP-GCTLEDAIENIDIGGPAMVRSAAKNWKHVAIVTDTADFPAIAAELEANNGALSDKTRFNLSRKAFSHTAQYDGMISNYL--TSLSDDVLSGQPQIGEFPSRFNQSWIKVQDMRYGENPHQRAAFY 237          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BACC4 (Bifunctional purine biosynthesis protein purH OS=Bacillus cereus (strain B4264) GN=purH PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.802e-47
Identity = 99/196 (50.51%), Postives = 133/196 (67.86%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGE 696
            K+AL+S+SDK  +     GL E G  ++STGGT   LE +G+ V  + ++T FPE++DGRVKTLHPNIHGG+LA RD + H+  ++E GI   D VVVNLYPF + +     + F D IENIDIGGP MIR+AAKNHK V V+VD  DY  +L  LK N +  ++ +RKLA K F+H A+YD+ +S +L +Q   E
Sbjct:    3 KRALVSVSDKTGVVEFVKGLLEQGIEVISTGGTKKLLEENGLQVIGISEVTGFPEIMDGRVKTLHPNIHGGLLAVRDNETHVTQMNELGIEPIDFVVVNLYPFKETIAKP-DVTFADAIENIDIGGPTMIRSAAKNHKFVSVIVDPVDYDIVLAELKENGEVAEETKRKLAAKVFRHTAAYDALISNYLTEQMGEE 197          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LYSSC (Bifunctional purine biosynthesis protein purH OS=Lysinibacillus sphaericus (strain C3-41) GN=purH PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.659e-47
Identity = 105/230 (45.65%), Postives = 147/230 (63.91%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLK-GNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKI 798
            K+ALIS+S+K  +      L  LGY I+STGGT   L+++ V+VT V+++T FPE+LDGRVKTL+P IHGG+L + D   H   ++EHGI   ++V VNLYPF + + S   + ++D IENIDIGGP M+R+AAKNH+ V V+VDS DY  +LE LK G     + RRKLA K F+H A+YDS +S +L      E++FP         ++         QKA FY +++
Sbjct:    3 KRALISVSNKDGILEFAKELVALGYEILSTGGTKKMLQDNAVAVTAVDEVTKFPEILDGRVKTLNPMIHGGLLGKFDDDSHQAQMNEHGIEPIEIVCVNLYPFVETI-SKPNVTWDDAIENIDIGGPTMLRSAAKNHQYVTVIVDSNDYATVLEELKAGGATTIETRRKLAAKVFRHTAAYDSYISNYL-----TEEEFPESLTMTYELKQNLRYGENPHQKAAFYQKRL 226          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_RHISN (Bifunctional purine biosynthesis protein purH OS=Rhizobium sp. (strain NGR234) GN=purH PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.771e-47
Identity = 96/185 (51.89%), Postives = 124/185 (67.03%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            AL+S+SDK  +  L   L   G  +VSTGGT  +L   G+ V+ V +LT FPE++DGRVKTLHP +HGG+LA RD   H  A+ EHGI   DL V+NLYPF ++V + GG D+   +ENIDIGGPAMIRA+AKNH  V +V D  DY ALLE +        FR+K+A KA+   A+YD+A+S W
Sbjct:   19 ALLSVSDKAGIVELARALHGKGVRLVSTGGTHKALAAAGLPVSDVSELTGFPEVMDGRVKTLHPGVHGGLLAIRDDADHKAAMDEHGITGIDLAVINLYPF-EEVRAQGG-DYPTTVENIDIGGPAMIRASAKNHAYVTIVTDPADYSALLEEIADGTTRYAFRQKMAAKAYARTAAYDAAISNW 201          

HSP 2 Score: 25.7942 bits (55), Expect = 3.771e-47
Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 2
Query:  734 LKSSPPYGENPHRKPAF 784
            LK    YGENPH+K  F
Sbjct:  220 LKEEMRYGENPHQKAGF 236          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_CHRVO (Bifunctional purine biosynthesis protein purH OS=Chromobacterium violaceum GN=purH PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.772e-47
Identity = 104/196 (53.06%), Postives = 126/196 (64.29%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLK--GNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAG 693
            ++ALIS+SDK  +      L  LG  I+STGGTA  L   G+ VT+V   T FPEMLDGRVKTLHP +HGGIL RRD   H+  ++EHGIG  DLV VNLYPF   V +      ED IENIDIGGP M+R+AAKN   V +V DS DYPAL+  LK  G +  +  R +LA KAF H A+YD A+S +L     G
Sbjct:    5 ERALISVSDKNGVLEFARELSALGVHILSTGGTAKLLLEAGLPVTEVSDYTGFPEMLDGRVKTLHPKVHGGILGRRDLPEHVATMAEHGIGNIDLVCVNLYPFEATVANP-DCSLEDAIENIDIGGPTMVRSAAKNWAHVAIVTDSADYPALVGELKANGGRLAKATRFELAKKAFTHTAAYDGAISNYLTSLAEG 199          

HSP 2 Score: 23.0978 bits (48), Expect = 3.772e-47
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+  AF
Sbjct:  226 YGENPHQAAAF 236          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BACAH (Bifunctional purine biosynthesis protein purH OS=Bacillus thuringiensis (strain Al Hakam) GN=purH PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.779e-47
Identity = 97/197 (49.24%), Postives = 134/197 (68.02%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGED 699
            K+AL+S+SDK  +     GL E G  ++STGGT   LE +G+ V  + ++T FPE++DGRVKTLHPNIHGG+LA RD + H+  ++E G+   D V+VNLYPF + +     + F D IENIDIGGP MIR+AAKNHK V V+VD  DY  +L  LK N +  ++ +RKLA K F+H A+YD+ +S +L +Q   E+
Sbjct:    3 KRALVSVSDKTGVVEFVKGLLEQGIEVISTGGTKKLLEENGLQVIGISEVTGFPEIMDGRVKTLHPNIHGGLLAVRDNETHVAQMNELGMEPIDFVIVNLYPFKETIAKP-DVTFADAIENIDIGGPTMIRSAAKNHKFVSVIVDPVDYDVVLAELKENGEVKEETKRKLAAKVFRHTAAYDALISNYLTEQMGEEN 198          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_DEIGD (Bifunctional purine biosynthesis protein purH OS=Deinococcus geothermalis (strain DSM 11300) GN=purH PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 4.918e-47
Identity = 104/197 (52.79%), Postives = 134/197 (68.02%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDK 702
            ++ALIS+SDK  + +    L E G+ ++STGGT  +L   G+  T V  +T FPE+LDGRVKTLHP IHGGILARR++  H+  L+EHG+   DLV VNLYPF  + T A G  FE+ IENIDIGGPAMIRAAAKNH  VLV+VD  DY    +    ++  Q  RR+LA KAF+H + YD+A+S +L    AG D+
Sbjct:    3 RRALISVSDKTGIEAFARALVERGWELLSTGGTLAALRAAGIPATAVSDVTGFPEILDGRVKTLHPAIHGGILARREE-GHLAQLAEHGLDLIDLVCVNLYPF--RETVARGATFEEAIENIDIGGPAMIRAAAKNHAGVLVLVDPADYGLAFQ----DEVSQTDRRRLAAKAFRHTSDYDAAISTYL----AGADE 188          

HSP 2 Score: 23.483 bits (49), Expect = 4.918e-47
Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 2
Query:  707 PPSVTVPLELKSSPPYGENPHRKPA 781
            P  +T+ L   ++  YGENPH+  A
Sbjct:  194 PEHLTLDLSRIAAVRYGENPHQPGA 218          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LACS1 (Bifunctional purine biosynthesis protein purH OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=purH PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 4.918e-47
Identity = 99/197 (50.25%), Postives = 136/197 (69.04%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGED 699
            K+AL+S+SDK +L      L E  + IVSTGGT   L+  G+    VE++T FPE+LDGRVKTL+P IHGG+LARR+   HM+ L E  I   DLV VNLYPF   + +   +  E+ IENIDIGGP+M+R+AAKN++DV+VVVD++DY  L + L  N +   + R KL+ K F+H A+YD+ ++++L KQ AGED
Sbjct:    2 KRALVSVSDKNNLVPFVKKLVEHDFEIVSTGGTKKYLDEAGIKTISVEEVTHFPEILDGRVKTLNPYIHGGLLARRELPEHMETLKEQNITPIDLVCVNLYPFKQTIENP-EVTLENAIENIDIGGPSMLRSAAKNYRDVVVVVDADDYEGLEKELDENGEISLETRFKLSAKTFRHTAAYDALIADYLSKQ-AGED 196          

HSP 2 Score: 27.335 bits (59), Expect = 4.918e-47
Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 2
Query:  701 NSPPSVTVPLELKSSPPYGENPHRKPAF 784
            ++P  +T+  +L SS  YGEN H+K  F
Sbjct:  196 DNPEKLTLTYDLISSMRYGENSHQKAWF 223          
The following BLAST results are available for this feature:
BLAST of DY260088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_STRE42.145e-4744.16Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_NEIG12.221e-4752.04Bifunctional purine biosynthesis protein purH OS=N... [more]
PUR9_NEIG22.802e-4746.61Bifunctional purine biosynthesis protein purH OS=N... [more]
PUR9_BACC42.802e-4750.51Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_LYSSC3.659e-4745.65Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_RHISN3.771e-4751.89Bifunctional purine biosynthesis protein purH OS=R... [more]
PUR9_CHRVO3.772e-4753.06Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_BACAH4.779e-4749.24Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_DEIGD4.918e-4752.79Bifunctional purine biosynthesis protein purH OS=D... [more]
PUR9_LACS14.918e-4750.25Bifunctional purine biosynthesis protein purH OS=L... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260088 ID=DY260088; Name=DY260088; organism=Citrus clementina; type=EST; length=1054bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAACAGACTGCTGGAGAAGATA
AATTCCCCTCCAAGCGTCACAGTGCCTCTTGAACTCAAAAGTTCTCCTCC
TTATGGTGAAAATCCCCACAGAAAGCCTGCTTTTATGTTGAAAAAATTCT
TGCCGAGGTTAATGCTGGTGGTATTGCTACCGCTATTCCCCCCCCTGGGA
AAGGAAAAGGCCCAATACCAACCATTTAGAACCTGAAGGCGCTTGGAATT
GCGCTACCAAATTTTAAAAAACCCACTTTGTGGTATTTGAAAACCAAAAA
AATCCCCGGGGGGGAACCTTCCCGTGATGAAATTCCTTGAGGGCCTAAAA
CCCGGGGCCGGGAAAACCCAAACCCCTTTTATTGGCCTTTGGGGGGGATT
TGGG
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