DY260088

Overview
NameDY260088
Unique NameDY260088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BACC7 (Bifunctional purine biosynthesis protein purH OS=Bacillus cereus (strain AH187) GN=purH PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.816e-46
Identity = 97/196 (49.49%), Postives = 133/196 (67.86%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGE 696
            ++AL+S+SDK  +     GL E G  ++STGGT   LE +G+ V  + ++T FPE++DGRVKTLHPNIHGG+LA RD + H+  ++E GI   D VVVNLYPF + +     + F D IENIDIGGP MIR+AAKNHK V V+VD  DY  +L  L+ N +  ++ +RKLA K F+H A+YD+ +S +L +Q   E
Sbjct:    3 QRALVSVSDKTGVVEFVKGLLEQGIEVISTGGTKKLLEENGLQVIGISEVTGFPEIMDGRVKTLHPNIHGGLLAVRDNETHVAQMNELGIEPIDFVVVNLYPFKETIAKP-DVTFADAIENIDIGGPTMIRSAAKNHKFVSVIVDPVDYDVVLAELEENGEVKEETKRKLAAKVFRHTAAYDALISNYLTEQMGEE 197          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BACSK (Bifunctional purine biosynthesis protein purH OS=Bacillus clausii (strain KSM-K16) GN=purH PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.372e-46
Identity = 109/228 (47.81%), Postives = 146/228 (64.04%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGG-TATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQ-QFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSP-QKACFY 786
            K+AL+S+S+K  L     GL E G  I+STGG T  +LE  G++V  V  +T FPE+LDGRVKTLHPNIHGG+LA R    H+  + E GI   D VVVNLYPF + + +     F D IENIDIGGP+M+R+AAKNH DV VVVD  DY A+L  L  ++++Q   R+KLA K F+H A+YD+ +  +L     GE+   S   + + T K +  + ++P QKA FY
Sbjct:    3 KRALVSVSNKTGLIPFVKGLAEAGVEILSTGGGTKRALEEAGIAVVNVSDVTGFPEILDGRVKTLHPNIHGGLLAMRTNDEHIKQIEELGIEPIDYVVVNLYPFAETIANPDA-SFADAIENIDIGGPSMLRSAAKNHADVTVVVDPADYDAVLASLDASKEEQLALRQKLAAKVFRHTAAYDAMIGSYL-TDAVGEENPESL--TVTYTHKQTLRYGENPHQKAAFY 226          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BACCN (Bifunctional purine biosynthesis protein purH OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=purH PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.372e-46
Identity = 98/196 (50.00%), Postives = 131/196 (66.84%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGE 696
            K+AL+S+S+K  +     GL E G  ++STGGT   LE +G+ V  + ++T FPE++DGRVKTLHPNIHGG+LA RD + H+  +SE GI   D VVVNLYPF + +     + F D IENIDIGGP MIR+AAKNHK V V+VD  DY  +L  LK   +   + +RKLA K F+H A+YD+ +S +L +Q   E
Sbjct:    3 KRALVSVSNKTGVVEFVKGLLEQGIEVISTGGTKKLLEENGLQVMGISEVTGFPEIMDGRVKTLHPNIHGGLLAVRDNEAHVAEMSELGIQLIDFVVVNLYPFKETIAKP-DVTFADAIENIDIGGPTMIRSAAKNHKFVSVIVDPADYDVVLAELKEKGEVTDETKRKLAAKVFRHTAAYDALISNYLTEQMGEE 197          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_RHIE6 (Bifunctional purine biosynthesis protein purH OS=Rhizobium etli (strain CIAT 652) GN=purH PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.139e-46
Identity = 91/189 (48.15%), Postives = 126/189 (66.67%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN--QDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K AL+S+ DK  +  L   L E G  ++STGGT  ++   G++VT V  +T FPE++DGRVKTLHP +HGG+LA RD   H +A+ +HGI   DL V+NLYPF ++V +AGG D+   +ENIDIGGPAMIRA+AKNH  V ++ D  DY    E L  +  +    FR+++A KA+   A+YD+A+S W
Sbjct:   17 KTALLSVFDKTGIVELAQALSERGVRLLSTGGTYKAIATAGLAVTDVSDITGFPEIMDGRVKTLHPTVHGGLLAIRDDSEHQEAMKKHGIEGIDLAVINLYPF-EEVRAAGG-DYPTTVENIDIGGPAMIRASAKNHAYVTILTDPNDYAEFKEQLSADAGKTAYAFRQRMAAKAYARTAAYDAAISNW 203          

HSP 2 Score: 28.1054 bits (61), Expect = 3.139e-46
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 2
Query:  698 INSPPSVTVPLELKSSPPYGENPHRKPAF 784
            I++P    +   LK    YGENPH+K AF
Sbjct:  210 IDAPRHRVIGGVLKEEMRYGENPHQKAAF 238          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BACC2 (Bifunctional purine biosynthesis protein purH OS=Bacillus cereus (strain G9842) GN=purH PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.046e-46
Identity = 98/196 (50.00%), Postives = 132/196 (67.35%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGE 696
            K+AL+S+SDK  +     GL E G  ++STGGT   LE +G+ V  + ++T FPE++DGRVKTLHPNIHGG+LA RD + H+  ++E GI   D VVVNLYPF + +     + F D IENIDIGGP MIR+AAKNH+ V V+VD  DY  +L  LK N +   + +RKLA K F+H A+YD+ +S +L +Q   E
Sbjct:    3 KRALVSVSDKTGVVEFVKGLLEQGIEVISTGGTKKLLEANGLQVIGISEVTGFPEIMDGRVKTLHPNIHGGLLAVRDNETHVIQMNELGIQPIDFVVVNLYPFKETIAKP-DVTFADAIENIDIGGPTMIRSAAKNHQFVSVIVDPVDYDVVLAELKENGEVMDETKRKLAAKVFRHTAAYDALISNYLTEQMGEE 197          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_MOOTA (Bifunctional purine biosynthesis protein purH OS=Moorella thermoacetica (strain ATCC 39073) GN=purH PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.093e-46
Identity = 103/202 (50.99%), Postives = 134/202 (66.34%), Query Frame = 1
Query:  109 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDY-PALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPS 711
            +K+ALIS+SDK  L  L  GL ELG+ ++STGGTA +L   G+ VT+V  +T FPE+LDGRVKTLHP IHGGILA R    H+  L E GI   DLVVVNLYPF + + +  G+   + IENIDIGGPAM+RAAAKNH+ V +VVD   Y   L E  +      + RR+LA  AF H A+YD+A++ +  +    E+ FP+
Sbjct:    2 SKRALISVSDKTGLVELARGLVELGWELLSTGGTARTLIAAGLPVTEVAAVTGFPEILDGRVKTLHPKIHGGILA-RPTPEHLAQLQEQGIQPIDLVVVNLYPFRETI-ARPGVTPAEAIENIDIGGPAMVRAAAKNHERVGIVVDPASYNEVLTELREKGSLSPETRRRLAAAAFAHTAAYDAAIAAYFQRLMRNEEPFPA 201          

HSP 2 Score: 23.0978 bits (48), Expect = 4.093e-46
Identity = 11/26 (42.31%), Postives = 13/26 (50.00%), Query Frame = 2
Query:  707 PPSVTVPLELKSSPPYGENPHRKPAF 784
            P S  +  E      YGENPH+  AF
Sbjct:  200 PASFVLSGEKVQDLRYGENPHQGAAF 225          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_ENTS8 (Bifunctional purine biosynthesis protein purH OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=purH PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.284e-46
Identity = 106/244 (43.44%), Postives = 144/244 (59.02%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQF--RRKLAWKAFQHVASYDSAVSEWL--------WKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAEVN 813
            ++AL+S+SDK  +      L   G  ++STGGTA  L   G+ VT+V   T FPEM+DGRVKTLHP +HGGIL RR Q    D +++H I   D+VVVNLYPF   V +  G   ED +ENIDIGGP M+R+AAKNHKDV +VV S DY A+++ L  N     F  R  LA KAF+H A+YDS ++ +          + TA   +FP   +     ++       S Q+A FY+E+ + E +
Sbjct:    8 RRALLSVSDKAGIVDFARALSTRGVELLSTGGTARLLAEAGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDD--DIMAQHAISPIDMVVVNLYPFAQTV-AREGCTLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYTAIIDELDANNGSLTFDTRFDLAIKAFEHTAAYDSMIANYFGSLVPAYHGETTAPAGRFPRTLNLNFIKKQDMRYGENSHQQAAFYIEEEIKEAS 248          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_NEIMA (Bifunctional purine biosynthesis protein purH OS=Neisseria meningitidis serogroup A GN=purH PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 5.332e-46
Identity = 99/190 (52.11%), Postives = 118/190 (62.11%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEWL 675
            K+ALISLSDK         L +LG  I+STGGTA  L + GV V +V   T FPEMLDGRVKTLHP IHGGIL RRD   H+  + EHGIG  DLV VNLYPF   +        ED IENIDIGGP M+R+AAKN K V +V D  D+PA+   ++ N      + R  L+ KAF H A YD  +S +L
Sbjct:    5 KRALISLSDKTGAVEFAQTLHKLGVEILSTGGTAKLLADAGVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLPEHVAKMEEHGIGNIDLVCVNLYPFAATIAKP-NCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDPADFPAIAAEMEANNGALSDKTRFNLSRKAFSHTAQYDGMISNYL 193          

HSP 2 Score: 24.2534 bits (51), Expect = 5.332e-46
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH++ AF
Sbjct:  226 YGENPHQRAAF 236          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LACAC (Bifunctional purine biosynthesis protein purH OS=Lactobacillus acidophilus GN=purH PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 5.334e-46
Identity = 98/198 (49.49%), Postives = 131/198 (66.16%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFL--KGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGED 699
            K+ALIS+SDK +L     GL + GY I+STGGT  +L+  GV    VE++T FPE+LDGRVKTL+P IHGG+LA+RD   HM  L +  I   DLV VNLYPF   +     +  E+ IENIDIGGP+++RAA+KN++DV VV D  DY  +L+ +  KGN    + R KLA K F+  A+YD+ ++ +L KQ   ED
Sbjct:    2 KRALISVSDKTNLVDFAKGLVQNGYEIISTGGTKKTLDEAGVKTISVEEVTNFPEILDGRVKTLNPYIHGGLLAKRDDLEHMATLEKLNIKPIDLVCVNLYPFKQTIEKP-DVTTEEAIENIDIGGPSLLRAASKNYQDVTVVTDKNDYDLVLKEIAEKGN-TTLETRAKLAAKVFRATAAYDAVIANYLTKQVGLED 197          

HSP 2 Score: 26.5646 bits (57), Expect = 5.334e-46
Identity = 10/26 (38.46%), Postives = 15/26 (57.69%), Query Frame = 2
Query:  698 INSPPSVTVPLELKSSPPYGENPHRK 775
            +  P  +T+  +LK    YGEN H+K
Sbjct:  195 LEDPEKLTLTYDLKEKMRYGENSHQK 220          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_HELMI (Bifunctional purine biosynthesis protein purH OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=purH PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 6.901e-46
Identity = 106/239 (44.35%), Postives = 148/239 (61.92%), Query Frame = 1
Query:  109 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN-QDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSP-QKACFYVEKILAEVNAG 819
            N++ALIS+SDK  +     GL +LG+ IVSTGGT  +++  GV VT V ++T FPE+LDGRVKTLHP +HGGILARR  + H+  L  H I   D+V VNLYPF + V    G+  E+ +ENIDIGGPAM+RA+AKNH+ V ++V+ + Y  +L  L+ N    +  RR LA +AF H A YD+A++ +L  +   +D F          +     + ++P QKA FY E+      AG
Sbjct:    2 NRRALISVSDKTGVVDFARGLADLGFEIVSTGGTYQTIKAAGVPVTYVTEITGFPEILDGRVKTLHPKVHGGILARRTPE-HLAQLEAHAIVPIDVVAVNLYPFRETVAKP-GVTREEAVENIDIGGPAMVRASAKNHESVAIIVNPDRYATVLAELQQNGVVSEATRRALAREAFAHTAEYDAAIAAYLAAEAGDDDPFAGIFAPGKVEKVQDLRYGENPHQKAAFYRERGYRGAGAG 238          
The following BLAST results are available for this feature:
BLAST of DY260088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_BACC71.816e-4649.49Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_BACSK2.372e-4647.81Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_BACCN2.372e-4650.00Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_RHIE63.139e-4648.15Bifunctional purine biosynthesis protein purH OS=R... [more]
PUR9_BACC24.046e-4650.00Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_MOOTA4.093e-4650.99Bifunctional purine biosynthesis protein purH OS=M... [more]
PUR9_ENTS85.284e-4643.44Bifunctional purine biosynthesis protein purH OS=E... [more]
PUR9_NEIMA5.332e-4652.11Bifunctional purine biosynthesis protein purH OS=N... [more]
PUR9_LACAC5.334e-4649.49Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_HELMI6.901e-4644.35Bifunctional purine biosynthesis protein purH OS=H... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260088 ID=DY260088; Name=DY260088; organism=Citrus clementina; type=EST; length=1054bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAACAGACTGCTGGAGAAGATA
AATTCCCCTCCAAGCGTCACAGTGCCTCTTGAACTCAAAAGTTCTCCTCC
TTATGGTGAAAATCCCCACAGAAAGCCTGCTTTTATGTTGAAAAAATTCT
TGCCGAGGTTAATGCTGGTGGTATTGCTACCGCTATTCCCCCCCCTGGGA
AAGGAAAAGGCCCAATACCAACCATTTAGAACCTGAAGGCGCTTGGAATT
GCGCTACCAAATTTTAAAAAACCCACTTTGTGGTATTTGAAAACCAAAAA
AATCCCCGGGGGGGAACCTTCCCGTGATGAAATTCCTTGAGGGCCTAAAA
CCCGGGGCCGGGAAAACCCAAACCCCTTTTATTGGCCTTTGGGGGGGATT
TGGG
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