DY260088

Overview
NameDY260088
Unique NameDY260088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LEPIC (Bifunctional purine biosynthesis protein purH OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=purH PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.031e-41
Identity = 94/232 (40.52%), Postives = 134/232 (57.76%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAE 807
            K+ALIS+SDK  L      L + G  I+STGGT   L+++G++   ++  T FPE+LDGRVKTLHP +HGG+L       H   + E  I   DLVVVNLYPF  K  S   +  E+ IENIDIGGP+MIR+AAKN+K  LV+ D  DY  +   +  +   ++       KAF H A YD+A+S W +KQ+   + FP    + S  +K    + ++P +A  + E +  +
Sbjct:    5 KRALISVSDKSGLVEFAKFLNQNGVEIISTGGTLKLLKDNGIAAIAIDDYTGFPEILDGRVKTLHPKVHGGLLGVISNPAHKQKMEELKIPKIDLVVVNLYPFL-KTVSKPEVQLEEAIENIDIGGPSMIRSAAKNYKHTLVLTDPNDYKEIQNLISSSGISEEISASYMRKAFSHTAMYDAAISSWFYKQSG--EVFPDVL-NLSFIKKQKLRYGENPHQAASFYEPLFTK 232          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_CHLP8 (Bifunctional purine biosynthesis protein purH OS=Chlorobaculum parvum (strain NCIB 8327) GN=purH PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.249e-41
Identity = 87/197 (44.16%), Postives = 124/197 (62.94%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLK--GNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGE 696
            K+AL+S+SDK  +      L  +G  I STGGT  +L++ G++   +  +T FPE++DGRVKTLHP IHGG+LA RD   H  A  E+GI   DLV VNLYPF   +  A  + FE+ IENIDIGGP+M+R+AAKN++ V V+ D+ DY  +L+ +K  G    +  R  LA K +   + YD+A++ ++ K    E
Sbjct:    7 KRALVSVSDKTGIVDFCRELASMGVEIFSTGGTLKALQDAGIAAESISTITGFPEIMDGRVKTLHPKIHGGLLAVRDNAEHQQAARENGIEFIDLVAVNLYPFEATIAKA-DVSFEEAIENIDIGGPSMLRSAAKNNESVTVITDAADYATVLDEMKSNGGATTRTTRLTLAAKVYALTSRYDTAIAAYMAKAAGVE 202          

HSP 2 Score: 24.6386 bits (52), Expect = 1.249e-41
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  713 SVTVPLELKSSPPYGENPHR 772
            ++TV LE +    YGENPH+
Sbjct:  207 TMTVKLEKELGMRYGENPHQ 226          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SHEAM (Bifunctional purine biosynthesis protein purH OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=purH PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.347e-41
Identity = 100/237 (42.19%), Postives = 135/237 (56.96%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFL--KGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAG--------EDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVE 792
            ++AL+S+SDK  +      L   G  ++STGGTA  L ++GV V +V   T  PE++DGRVKTLHP +HGGILARR Q    D ++ + IG  DLV VNLYPF   V    G   ED IENIDIGGP M+RAAAKNHKDV++VV+++DY  +L  +   G       R  LA  AF+H A+YD  ++ +               + KFP   ++    ++       S Q A FYV+
Sbjct:    8 RRALLSVSDKTGILEFAQALHAQGVELLSTGGTAKLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGGILARRGQDE--DVMAANNIGPIDLVAVNLYPFAATVAKP-GCTLEDAIENIDIGGPTMVRAAAKNHKDVVIVVNAKDYDRVLAEMSANGGSTSHATRFDLAIAAFEHTAAYDGMIANYFGTMVPAHSSDECHDDSKFPRTFNTQLVKKQDLRYGENSHQSAAFYVD 241          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LEPBL (Bifunctional purine biosynthesis protein purH OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=purH PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.347e-41
Identity = 95/232 (40.95%), Postives = 132/232 (56.90%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAE 807
            K+ALIS+SDK D+      L + G  I+STGGT   L+++G+    ++  T FPE+L+GRVKTLHP +HGG+L       H   + E  I   DLVVVNLYPF  K  S  G+  E+ IENIDIGGP+MIR+AAKN+K  LV+ D  DY  +   +      ++       KAF H A YD+A+S W  KQ    D FP    + S  +K    + ++P +A  + E +  +
Sbjct:    5 KRALISVSDKSDIVEFAQFLNQNGVEIISTGGTLKLLKDNGIQAIAIDDYTGFPEILEGRVKTLHPKVHGGLLGVVSNPAHKQKMEELKIPKIDLVVVNLYPFL-KTVSKPGVQLEEAIENIDIGGPSMIRSAAKNYKHTLVLTDPSDYEEVRVLIASGGISEEVAAGYMRKAFSHTAMYDTAISSWFHKQAG--DVFPDVL-NLSFLKKQKLRYGENPHQAASFYEPLFVK 232          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LEPBJ (Bifunctional purine biosynthesis protein purH OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=purH PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.347e-41
Identity = 95/232 (40.95%), Postives = 132/232 (56.90%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAE 807
            K+ALIS+SDK D+      L + G  I+STGGT   L+++G+    ++  T FPE+L+GRVKTLHP +HGG+L       H   + E  I   DLVVVNLYPF  K  S  G+  E+ IENIDIGGP+MIR+AAKN+K  LV+ D  DY  +   +      ++       KAF H A YD+A+S W  KQ    D FP    + S  +K    + ++P +A  + E +  +
Sbjct:    5 KRALISVSDKSDIVEFAQFLNQNGVEIISTGGTLKLLKDNGIQAIAIDDYTGFPEILEGRVKTLHPKVHGGLLGVVSNPAHKQKMEELKIPKIDLVVVNLYPFL-KTVSKPGVQLEEAIENIDIGGPSMIRSAAKNYKHTLVLTDPSDYEEVRVLIASGGISEEVAAGYMRKAFSHTAMYDTAISSWFHKQAG--DVFPDVL-NLSFLKKQKLRYGENPHQAASFYEPLFVK 232          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_ANATD (Bifunctional purine biosynthesis protein purH OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=purH PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.347e-41
Identity = 99/228 (43.42%), Postives = 136/228 (59.65%), Query Frame = 1
Query:  109 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPAL-LEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSP-QKACFY 786
            NK+A+IS+ DK  +      L+E GY I+STGGT   L  +G+ V  +  +T FPE+LDGRVKTLHPNIH GILA +D + H++ L    I   D+VVVNLYPF + +     +  ++ IENIDIGGP MIRAAAKN K   V+VD EDY  + +E  K  +   + R  LA K F++ + YDS +  + +K    +  F SK  +          + ++P QKACFY
Sbjct:    2 NKRAIISVYDKNGIVEFAKKLKEFGYDIISTGGTMKYLTENGIEVINISDVTRFPEILDGRVKTLHPNIHAGILAMKDNREHLETLKALDILPIDMVVVNLYPFKETIFKE-DVTLDNVIENIDIGGPTMIRAAAKNFKYTTVIVDPEDYDIVAMEIEKNGEVSYETRFYLATKVFEYTSYYDSMIFNY-FKHVRKDQSF-SKHFTVPLELLQYLRYGENPHQKACFY 226          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_PROVI (Bifunctional purine biosynthesis protein purH OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=purH PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.627e-41
Identity = 88/197 (44.67%), Postives = 123/197 (62.44%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLK--GNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGE 696
            K+AL+S+SDK  +      L  LG  I STGGT  +L++ G+    +  +T FPE++DGRVKTLHP IHGG+LA R+   H     E+GI   D+VVVNLYPF +   +   + FED IENIDIGGP+M+R+AAKN++ V V+ DS DY  +L  ++  G    +  R +LA K F+  + YD A++ +L K    E
Sbjct:    7 KRALVSVSDKTGIVDFCRELVSLGVEIFSTGGTLKTLQDAGLKAASISTITGFPEIMDGRVKTLHPKIHGGLLAVRNNPDHSAQAIENGISFIDMVVVNLYPF-EATVAKPDVSFEDAIENIDIGGPSMLRSAAKNNESVTVLTDSADYAGVLAEMRAGGGATLRSTRLRLALKVFELTSRYDRAIAGYLSKSAGTE 202          

HSP 2 Score: 26.9498 bits (58), Expect = 1.627e-41
Identity = 11/30 (36.67%), Postives = 18/30 (60.00%), Query Frame = 2
Query:  695 KINSPPSVTVPLELKSSPPYGENPHRKPAF 784
            ++ +  S+TV L+ +    YGENPH+   F
Sbjct:  202 EVAAAESMTVQLDKELGMRYGENPHQSAGF 231          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LEIXX (Bifunctional purine biosynthesis protein purH OS=Leifsonia xyli subsp. xyli GN=purH PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.759e-41
Identity = 94/187 (50.27%), Postives = 119/187 (63.64%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            ++ALIS+SDK  L  L   L + G  IVSTG TA ++   G +VT V  +T FPE LDGRVKTLHP IH G+LA      H + L + GI  F+LVVVNLYPF + V S G +D +D +E IDIGGPAM+RA+AKNH +V +VV   DY  L   +         RR+LA +AF H A+YD AV+ W
Sbjct:   20 RRALISVSDKTGLLDLAASLADAGVEIVSTGSTAQTIREAGHTVTDVASVTGFPESLDGRVKTLHPAIHSGLLADLRLASHEEQLKDLGIEPFELVVVNLYPFVETVAS-GAVD-DDVVEQIDIGGPAMVRASAKNHANVAIVVSPADYAGLAAAVAAGGTTWGQRRELAARAFAHTAAYDGAVAAW 204          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_ALCBS (Bifunctional purine biosynthesis protein purH OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=purH PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.759e-41
Identity = 100/237 (42.19%), Postives = 141/237 (59.49%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN----QDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSL----W*KSP-QKACFYVEK 795
            ++ALIS+SDK  +      L + G  ++STGGT   L+  G++V +V   T FPEM+ GRVKTLHP +HGGIL RR Q   +  ++++ I   DLVVVNLYPF   V +      ED IENIDIGGP M+R+AAKN+  V +V D+ DY  +L+ +  N     DD +F   LA KAF+H A+YDSA++ +  K+  G+D   +     +    F       + ++P QKA FY E+
Sbjct:    5 ERALISVSDKTGIVEFAQALADKGVELLSTGGTFKKLQEAGIAVREVSDYTGFPEMMAGRVKTLHPKVHGGILGRRGQDEQV--MADNDISPIDLVVVNLYPFEATVANP-DCSLEDAIENIDIGGPTMVRSAAKNNASVGIVTDAADYQRVLDDMAANNGALSDDLRF--DLAIKAFEHTAAYDSAIANYFGKKVEGQDGMSNLDFPRTINLNFEKTQNMRYGENPHQKAAFYTER 236          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_RHILO (Bifunctional purine biosynthesis protein purH OS=Rhizobium loti GN=purH PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.119e-41
Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN--QDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            ++AL+S+ DK  L      L   G  +VSTGGTA ++   G++V  V +LT FPE++DGRVKTLHP++HG +L  RD   H  A+ ++GI   DL+V NLYPF +      G D+   +ENIDIGGPAMIRA+AKNH  V +V D  DY ++L  L+ N       FR+KLA KAF   A+YD+A+S W
Sbjct:   17 RRALLSVFDKTGLIDFARALAAAGVELVSTGGTAKAIAEAGLAVRDVSELTGFPEIMDGRVKTLHPSVHGALLGVRDDPEHAAAMRKYGIEPIDLLVSNLYPFEE--VRRSGADYAAIVENIDIGGPAMIRASAKNHAYVAIVTDPGDYASVLNALEMNIGSLSLDFRKKLAAKAFARTATYDAAISGW 203          

HSP 2 Score: 21.9422 bits (45), Expect = 2.119e-41
Identity = 7/11 (63.64%), Postives = 8/11 (72.73%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+   F
Sbjct:  228 YGENPHQSAGF 238          
The following BLAST results are available for this feature:
BLAST of DY260088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_LEPIC1.031e-4140.52Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_CHLP81.249e-4144.16Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_SHEAM1.347e-4142.19Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_LEPBL1.347e-4140.95Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_LEPBJ1.347e-4140.95Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_ANATD1.347e-4143.42Bifunctional purine biosynthesis protein purH OS=A... [more]
PUR9_PROVI1.627e-4144.67Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_LEIXX1.759e-4150.27Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_ALCBS1.759e-4142.19Bifunctional purine biosynthesis protein purH OS=A... [more]
PUR9_RHILO2.119e-4147.62Bifunctional purine biosynthesis protein purH OS=R... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260088 ID=DY260088; Name=DY260088; organism=Citrus clementina; type=EST; length=1054bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAACAGACTGCTGGAGAAGATA
AATTCCCCTCCAAGCGTCACAGTGCCTCTTGAACTCAAAAGTTCTCCTCC
TTATGGTGAAAATCCCCACAGAAAGCCTGCTTTTATGTTGAAAAAATTCT
TGCCGAGGTTAATGCTGGTGGTATTGCTACCGCTATTCCCCCCCCTGGGA
AAGGAAAAGGCCCAATACCAACCATTTAGAACCTGAAGGCGCTTGGAATT
GCGCTACCAAATTTTAAAAAACCCACTTTGTGGTATTTGAAAACCAAAAA
AATCCCCGGGGGGGAACCTTCCCGTGATGAAATTCCTTGAGGGCCTAAAA
CCCGGGGCCGGGAAAACCCAAACCCCTTTTATTGGCCTTTGGGGGGGATT
TGGG
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