DY260088

Overview
NameDY260088
Unique NameDY260088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SYNS3 (Bifunctional purine biosynthesis protein purH OS=Synechococcus sp. (strain CC9311) GN=purH PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.120e-41
Identity = 92/189 (48.68%), Postives = 120/189 (63.49%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGLQEL-GYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEWL 675
            AL+S+SDK+ +  L   L  L GY ++S+GGTA  L+  G+ VT+V   T  PE+L GRVKTLHP IHGGILARR    H   L E  I   D+VVVNLYPF + V +   + ++  IENIDIGGP M+R+AAKNH  V V+   E Y   L+ L G+    +   RR+LA +AF H A+YD A+S W+
Sbjct:    5 ALLSVSDKRGVVPLAEALHRLHGYQLLSSGGTAKVLQEAGLPVTRVADHTGAPEILGGRVKTLHPRIHGGILARRGDPAHEADLLEQQIDPIDVVVVNLYPFRETVATP-DVSWDAAIENIDIGGPTMVRSAAKNHAHVAVLTSPEQYDRFLKALSGSAGGVNANVRRQLALEAFAHTAAYDVAISRWM 192          

HSP 2 Score: 25.409 bits (54), Expect = 2.120e-41
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  728 LELKSSPPYGENPHRKPAF 784
            L L+ +  YGENPH+K A+
Sbjct:  217 LPLRQTLRYGENPHQKAAW 235          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_PROMH (Bifunctional purine biosynthesis protein purH OS=Proteus mirabilis (strain HI4320) GN=purH PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.297e-41
Identity = 100/244 (40.98%), Postives = 141/244 (57.79%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQF--RRKLAWKAFQHVASYDSAVSEWLWKQTA---GEDKFPSKRHSAS*TQKF-----SSLW*KSPQKACFYVEKILAEVN 813
            ++AL+S+SDK  +      L E    ++STGGTA  L   G+ V +V   T FPEM+DGRVKTLHP +HGGIL RR Q   +  + EH I   D+VVVNLYPF  K  +       D +ENIDIGGP M+R+AAKNHKDV +VV+S DY  ++E +  +Q+      R  LA KAF+H A+YDS ++ +  ++ A   G+   PS     +    +           + Q+A FY+E+ + E +
Sbjct:    8 RRALLSVSDKAGILEFAKALVERNVELLSTGGTARLLAEAGLPVIEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDTI--MEEHDIRPIDMVVVNLYPF-AKTVAHPDCSLADAVENIDIGGPTMVRSAAKNHKDVTIVVNSNDYEKVIEEMDNHQNSLTLDTRFDLAIKAFEHTAAYDSMIANYFGQKVAPYYGDTSQPSGTFPRTLNLNYIKKQDMRYGENAHQQAAFYIEENIEEAS 248          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BARBK (Bifunctional purine biosynthesis protein purH OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=purH PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.918e-41
Identity = 100/227 (44.05%), Postives = 135/227 (59.47%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQF--RRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKACFY 786
            ++AL+S+ DK  L      L   G  ++STGGT+ SL   G+ V  V ++T FP+++DGRVKTLHP IHGG+L  RD   H  A+ +HGI   DLVVVNLYPF  + T   G D +  IENIDIGGPAMIRAAAKNH    VV    DY  +L  LK +     F  RR+LA +A++H A+YD+A++ W  +    E + PS ++ +   +          Q+A FY
Sbjct:   17 RRALLSVFDKTGLVEFAQELHAYGIELISTGGTSESLIAAGLPVKDVSEVTGFPQIMDGRVKTLHPLIHGGLLGVRDDPSHKAAMEKHGICGIDLVVVNLYPF--EKTWQSGADSQTIIENIDIGGPAMIRAAAKNHAYTGVVTAVSDYDVVLAELKQHNGCLSFSLRRQLAARAYEHTAAYDAAIAAWFAQDL--EVEMPSWQNFSGHFESMMRYGENPHQRAAFY 239          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_HAEIN (Bifunctional purine biosynthesis protein purH OS=Haemophilus influenzae GN=purH PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.109e-41
Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQF--RRKLAWKAFQHVASYDSAVSEW 672
            +QAL+S+SDK  +     GL + G  ++STGGTA  L  + + V +V   T FPEM+DGRVKTLHP +HGGIL RR     +  + +HGI   D+VVVNLYPF   V         D +ENIDIGGP M+R+AAKNHKDV +VV++ D+ A+L  +  +Q+   F  R  LA KAF+H A YDS ++ +
Sbjct:    7 RQALLSVSDKTGIVEFAQGLVKRGVKLLSTGGTAKLLAQNALPVIEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGTDDAI--MQQHGIEGIDMVVVNLYPFAATVAKP-DCTLADAVENIDIGGPTMVRSAAKNHKDVAIVVNNHDFNAILAEMDQHQNSLTFETRFDLAIKAFEHTAQYDSMIANY 192          

HSP 2 Score: 21.9422 bits (45), Expect = 6.109e-41
Identity = 9/26 (34.62%), Postives = 14/26 (53.85%), Query Frame = 2
Query:  707 PPSVTVPLELKSSPPYGENPHRKPAF 784
            P ++ +    K +  YGEN H+  AF
Sbjct:  216 PRTLNLNFVRKQAMRYGENSHQNAAF 241          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_HAES1 (Bifunctional purine biosynthesis protein purH OS=Haemophilus somnus (strain 129Pt) GN=purH PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 6.684e-41
Identity = 101/247 (40.89%), Postives = 143/247 (57.89%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDD--QQFRRKLAWKAFQHVASYDSAVSEWLWKQT-----AGED------KFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAEVN 813
            +QAL+S+SDK  +     GL + G  ++STGGTA  L  +G+ VT+V   T FPEM++GRVKTLHP IHGGIL RR      + + +H I   D+VVVNLYPF   V        ED +ENIDIGGP M+R+AAKNH+ V +VV++ D+ A+L  +  N++    + R  LA KAF+H A YDS ++ +  +       A E+      +FP   +     ++         QKA FYVE+ + E +
Sbjct:    8 RQALLSVSDKSGIVEFAQGLVKRGVKLLSTGGTAKLLAENGIPVTEVSDYTGFPEMMEGRVKTLHPKIHGGILGRRGIDD--EVMMQHQIDAIDMVVVNLYPFAATVAKP-DCTLEDAVENIDIGGPTMVRSAAKNHQHVAIVVNNSDFNAILAEMDQNRNSLTLETRFDLAIKAFEHTAQYDSMIANYFGQMVKPYFRAEEEAEAKCGQFPRTLNLNFIRKQSMRYGENGHQKAAFYVEQDVKEAS 251          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_PSYCK (Bifunctional purine biosynthesis protein purH OS=Psychrobacter cryohalolentis (strain K5) GN=purH PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.729e-41
Identity = 102/230 (44.35%), Postives = 137/230 (59.57%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFL-KGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFP---SKRHSAS*TQKFSSLW*KSP-QKACFYVE 792
            AL+S+S+K ++     GL + G+ ++STGGT   L    V+VT+V   T FPEM+DGRVKTLHP IHGGIL RR     +  +SEH I   DLVVVNLYPF + + +   +   D IENIDIGGP M+R+AAKNH  V +V D  DY  +LE L  G       R  LA KAF+H A YD  ++ +L  +   E++ P   S+  +    +     + ++P QKA FYVE
Sbjct:    7 ALLSVSNKSNIVEFAQGLIKAGFGLLSTGGTFRLLTEHNVAVTEVSDYTGFPEMMDGRVKTLHPKIHGGILGRRGTDDAV--MSEHAIERIDLVVVNLYPFAETI-ARSDVTMNDAIENIDIGGPTMVRSAAKNHAHVGIVTDPADYTRVLEALGDGTTLTHALRYDLAVKAFEHTAQYDGMIANFLGSR-VNENQEPEDFSRTFNVQLEKVQDLRYGENPHQKAAFYVE 232          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_PSYA2 (Bifunctional purine biosynthesis protein purH OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=purH PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.729e-41
Identity = 101/229 (44.10%), Postives = 136/229 (59.39%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWLWKQT--AGEDKFPSKRHSAS*TQKFSSLW*KSP-QKACFYVE 792
            AL+S+SDK ++     GL + G+ ++STGGT   L    V+VT+V   T FPEM+DGRVKTLHP IHGGIL RR     +  +SEH I   DLVVVNLYPF + + +   +   D IENIDIGGP M+R+AAKNH  V +V D  DY  +LE L  +       R  LA KAF+H A YD  ++ +L  +   + E +  S+  +    +     + ++P QKA FYVE
Sbjct:    7 ALLSVSDKSNIVEFAQGLIQAGFGLLSTGGTFRLLTEHNVAVTEVSDYTGFPEMMDGRVKTLHPKIHGGILGRRGTDDMV--MSEHAIERIDLVVVNLYPFAETI-ARSDVTMNDAIENIDIGGPTMVRSAAKNHAHVGIVTDPADYTRVLEALGDSTALTATLRYDLAVKAFEHTAQYDGMIANFLGSRVNESQEPESFSRTFNVQLEKVQDLRYGENPHQKAAFYVE 232          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_HAES2 (Bifunctional purine biosynthesis protein purH OS=Haemophilus somnus (strain 2336) GN=purH PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.729e-41
Identity = 101/247 (40.89%), Postives = 142/247 (57.49%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDD--QQFRRKLAWKAFQHVASYDSAVSEWLWKQT-----AGED------KFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAEVN 813
            +QAL+S+SDK  +     GL   G  ++STGGTA  L  +G+ VT+V   T FPEM++GRVKTLHP IHGGIL RR      + + +H I   D+VVVNLYPF   V        ED +ENIDIGGP M+R+AAKNH+ V +VV++ D+ A+L  +  N++    + R  LA KAF+H A YDS ++ +  +       A E+      +FP   +     ++         QKA FYVE+ + E +
Sbjct:    8 RQALLSVSDKSGIVEFAQGLVRRGVKLLSTGGTAKLLAENGIPVTEVSDYTGFPEMMEGRVKTLHPKIHGGILGRRGIDD--EVMMQHQIDAIDMVVVNLYPFAATVAKP-DCTLEDAVENIDIGGPTMVRSAAKNHQHVAIVVNNSDFNAILAEMDQNRNSLTLETRFDLAIKAFEHTAQYDSMIANYFGQMVKPYFRAEEEAEAKCGQFPRTLNLNFIRKQSMRYGENGHQKAAFYVEQDVKEAS 251          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_PASMU (Bifunctional purine biosynthesis protein purH OS=Pasteurella multocida GN=purH PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.140e-40
Identity = 100/248 (40.32%), Postives = 145/248 (58.47%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDD--QQFRRKLAWKAFQHVASYDSAVSEWLWKQ-----TAGED-------KFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAEVN 813
            +QAL+S+SDK  +      L + G  ++STGGTA  L + G++VT+V   T FPEM+DGRVKTLHP +HGGIL RR      + +S+ GI   D+VVVNLYPF   V        E+ +ENIDIGGP M+R+AAKNH+DV +VV++ D+ A+L  +  +Q+    + R  LA KAF+H A YD+ ++ +  +       A E+       +FP   +     ++         QKA FYVE+ + E +
Sbjct:    8 RQALLSVSDKTGIVEFAQALVQRGVKLLSTGGTAKLLADHGLAVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGTDD--EVMSQQGIEGIDMVVVNLYPFAATVAKP-NCSLEEAVENIDIGGPTMVRSAAKNHQDVAIVVNNSDFNAILAEMDQHQNSLTLETRFDLAIKAFEHTAQYDAMIANYFGQLVKPYFVAEEEDAEAKCGQFPRTLNLNFIRKQTMRYGENGHQKAAFYVEQDVKEAS 252          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LEPBP (Bifunctional purine biosynthesis protein purH OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=purH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.352e-40
Identity = 91/203 (44.83%), Postives = 125/203 (61.58%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGN-QDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSK 714
            K+AL+S+SDK  +  +   L + G  I+STGGT  +L   G++V KV++ T FPE+L GRVKTLHP IHGG+L       H+  +  +GI    LV+VNLYPF  K      +  ED IENIDIGGP+M+R+AAKNHK+V+V+ D +DY +   EF   N +  ++     A K F   ASYDSA+S +  K+     K+P K
Sbjct:    5 KRALVSVSDKTGITEICSFLTKHGVEILSTGGTYDALSKAGIAVKKVDEFTGFPEILHGRVKTLHPKIHGGLLGDTTNPDHVKQMESNGIVPITLVIVNLYPFV-KTVMKPDVTLEDAIENIDIGGPSMLRSAAKNHKNVVVLTDPKDYESFQNEFTTNNGKISRETAFGYAAKVFSETASYDSAISSYFNKRLG--IKYPDK 204          

HSP 2 Score: 27.7202 bits (60), Expect = 1.352e-40
Identity = 12/29 (41.38%), Postives = 14/29 (48.28%), Query Frame = 2
Query:  698 INSPPSVTVPLELKSSPPYGENPHRKPAF 784
            I  P  +T     K    YGENPH+  AF
Sbjct:  199 IKYPDKITFAFNKKQKLRYGENPHQDAAF 227          
The following BLAST results are available for this feature:
BLAST of DY260088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_SYNS32.120e-4148.68Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_PROMH2.297e-4140.98Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_BARBK3.918e-4144.05Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_HAEIN6.109e-4147.62Bifunctional purine biosynthesis protein purH OS=H... [more]
PUR9_HAES16.684e-4140.89Bifunctional purine biosynthesis protein purH OS=H... [more]
PUR9_PSYCK8.729e-4144.35Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_PSYA28.729e-4144.10Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_HAES28.729e-4140.89Bifunctional purine biosynthesis protein purH OS=H... [more]
PUR9_PASMU1.140e-4040.32Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_LEPBP1.352e-4044.83Bifunctional purine biosynthesis protein purH OS=L... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260088 ID=DY260088; Name=DY260088; organism=Citrus clementina; type=EST; length=1054bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAACAGACTGCTGGAGAAGATA
AATTCCCCTCCAAGCGTCACAGTGCCTCTTGAACTCAAAAGTTCTCCTCC
TTATGGTGAAAATCCCCACAGAAAGCCTGCTTTTATGTTGAAAAAATTCT
TGCCGAGGTTAATGCTGGTGGTATTGCTACCGCTATTCCCCCCCCTGGGA
AAGGAAAAGGCCCAATACCAACCATTTAGAACCTGAAGGCGCTTGGAATT
GCGCTACCAAATTTTAAAAAACCCACTTTGTGGTATTTGAAAACCAAAAA
AATCCCCGGGGGGGAACCTTCCCGTGATGAAATTCCTTGAGGGCCTAAAA
CCCGGGGCCGGGAAAACCCAAACCCCTTTTATTGGCCTTTGGGGGGGATT
TGGG
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