DY260088

Overview
NameDY260088
Unique NameDY260088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_LEPBA (Bifunctional purine biosynthesis protein purH OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=purH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.352e-40
Identity = 91/203 (44.83%), Postives = 125/203 (61.58%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGN-QDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSK 714
            K+AL+S+SDK  +  +   L + G  I+STGGT  +L   G++V KV++ T FPE+L GRVKTLHP IHGG+L       H+  +  +GI    LV+VNLYPF  K      +  ED IENIDIGGP+M+R+AAKNHK+V+V+ D +DY +   EF   N +  ++     A K F   ASYDSA+S +  K+     K+P K
Sbjct:    5 KRALVSVSDKTGITEICSFLTKHGVEILSTGGTYDALSKAGIAVKKVDEFTGFPEILHGRVKTLHPKIHGGLLGDTTNPDHVKQMESNGIVPITLVIVNLYPFV-KTVMKPDVTLEDAIENIDIGGPSMLRSAAKNHKNVVVLTDPKDYESFQNEFTTNNGKISRETAFGYAAKVFSETASYDSAISSYFNKRLG--IKYPDK 204          

HSP 2 Score: 27.7202 bits (60), Expect = 1.352e-40
Identity = 12/29 (41.38%), Postives = 14/29 (48.28%), Query Frame = 2
Query:  698 INSPPSVTVPLELKSSPPYGENPHRKPAF 784
            I  P  +T     K    YGENPH+  AF
Sbjct:  199 IKYPDKITFAFNKKQKLRYGENPHQDAAF 227          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_NATTJ (Bifunctional purine biosynthesis protein purH OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=purH PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.352e-40
Identity = 95/204 (46.57%), Postives = 124/204 (60.78%), Query Frame = 1
Query:  115 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGED-----KFP 708
            + L+S+ DK  L +L   L+++G  +VSTGGT   L+  G+ V  VE++T FPE+L GRVKTLHP IHGGILA+  +   + +L    I TFDLV+VNLYPF   +  A   + E+ +ENIDIGGP MIRAAAKN   V V VD  DY  L + LK       +FR+ LA KAF+H A YD A+  +       +D     KFP
Sbjct:    8 RVLLSVYDKTGLITLAQELKDMGVELVSTGGTLRHLQTHGIPVYSVEEVTGFPEILSGRVKTLHPKIHGGILAKNRENEELSSLD---IKTFDLVIVNLYPFEQVMQKAEATE-EEVMENIDIGGPTMIRAAAKNWYRVGVCVDPTDYEVLTQQLKQYHGLTDEFRKTLARKAFKHTAQYDKAIFNYFESVDTNKDDETELKFP 207          

HSP 2 Score: 26.5646 bits (57), Expect = 1.352e-40
Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  749 PYGENPHRKPAFMLK 793
            PYGENPH+K + +++
Sbjct:  218 PYGENPHQKASLLME 232          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_PROAC (Bifunctional purine biosynthesis protein purH OS=Propionibacterium acnes GN=purH PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.489e-40
Identity = 90/187 (48.13%), Postives = 118/187 (63.10%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            ++AL+S+ DK  L  L   L +    +VSTG TA  L + GV+VT+V ++T FPE LDGRVKTLHP +H GILA R    H + L+   +  FDLVV NLYPF + V   G  DF++ IE IDIGGP+M+RAAAKNH +V V+ + + Y  L   L       + RR LA +AF H A+YD AV+ W
Sbjct:    8 RRALVSVYDKSGLDQLAKALIDAQVEVVSTGSTAKELASHGVTVTEVSEITGFPECLDGRVKTLHPKVHAGILADRRLTSHREQLTALEVKPFDLVVCNLYPFAETVAQGG--DFDECIEKIDIGGPSMVRAAAKNHANVAVLTNPDQYEDLARALSEGGYTMEERRVLAARAFAHTAAYDVAVATW 192          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BARQU (Bifunctional purine biosynthesis protein purH OS=Bartonella quintana GN=purH PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.988e-40
Identity = 89/189 (47.09%), Postives = 119/189 (62.96%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQF--RRKLAWKAFQHVASYDSAVSEW 672
            ++ L+S+SDK  + +    L      ++STGGTA  L + G+ V  V ++T FPE++DGRVKTLHP IHG +L  R    H  A+ +HGI   DL+VVNLYPF  + TS  G D +  +ENIDIGGPAMIRAAAKNH    VV    DY  +L  LK +     F  RR+LA +A+ H A+YD+A++ W
Sbjct:   17 RRVLLSVSDKTGVVAFAQALHAYSVELISTGGTAKVLMDAGLPVKDVAEVTGFPEIMDGRVKTLHPLIHGALLGVRQDPSHAVAMEKHGIHGIDLLVVNLYPF--EKTSQSGADGQTILENIDIGGPAMIRAAAKNHAYTGVVTAVSDYDFVLAELKQHDGCLSFSMRRQLAMRAYAHTAAYDAAIATW 203          

HSP 2 Score: 25.409 bits (54), Expect = 2.988e-40
Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 2
Query:  695 KINSPPSVTVPLELKSSPPYGENPHRKPAF 784
            KI +P   +    L++   YGENPH++ AF
Sbjct:  209 KIETPSWQSFSGYLENVMRYGENPHQQAAF 238          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_PROMM (Bifunctional purine biosynthesis protein purH OS=Prochlorococcus marinus (strain MIT 9313) GN=purH PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.990e-40
Identity = 91/187 (48.66%), Postives = 121/187 (64.71%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGLQEL-GYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            AL+S+S+K  +  L   L  + G+ ++S+GGTA  LE+ G+ VT+V + T   E+L GRVKTLHP +HGGILA R    H   L +H I   D+VVVNLYPF + V +   + +E  IENIDIGGPAM+RAAAKNH  V V+   + Y   L  L    DD Q RR+LA +AF+H A+YD A+S W+
Sbjct:    5 ALLSVSNKHGIVPLAESLHRMHGFQLLSSGGTAKVLEDAGLPVTRVAEHTGAAEILGGRVKTLHPRVHGGILAMRGDPDHEVDLEQHQIPPIDVVVVNLYPFRETVANP-QVSWETAIENIDIGGPAMVRAAAKNHAHVAVLTRPDQYDRFLVALSDGVDD-QLRRELALEAFEHTAAYDVAISHWM 189          

HSP 2 Score: 21.557 bits (44), Expect = 2.990e-40
Identity = 8/19 (42.11%), Postives = 12/19 (63.16%), Query Frame = 2
Query:  728 LELKSSPPYGENPHRKPAF 784
            + L+    YGENPH+  A+
Sbjct:  204 IPLRQRLRYGENPHQHAAW 222          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_PROM3 (Bifunctional purine biosynthesis protein purH OS=Prochlorococcus marinus (strain MIT 9303) GN=purH PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.990e-40
Identity = 91/187 (48.66%), Postives = 121/187 (64.71%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGLQEL-GYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            AL+S+S+K  + SL   L  + G+ ++S+GGTA  LE+ G+ VT+V + T   E+L GRVKTLHP +HGGILA R    H   L +H I   D+VVVNLYPF + V +   + +E  IENIDIGGPAM+RAAAKNH  V V+   + Y   L  L    D  Q RR+LA +AF+H A+YD A+S W+
Sbjct:    5 ALLSVSNKHGIVSLAESLHRMHGFQLLSSGGTAKVLEDAGLPVTRVAEHTGAAEILGGRVKTLHPRVHGGILAMRGDPDHEVDLEQHQIPPIDVVVVNLYPFRETVANP-QVSWETAIENIDIGGPAMVRAAAKNHAHVAVLTRPDQYDRFLVALSDGVDG-QLRRELALEAFEHTAAYDVAISHWM 189          

HSP 2 Score: 22.3274 bits (46), Expect = 2.990e-40
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 2
Query:  728 LELKSSPPYGENPHRKPAF 784
            + L+    YGENPH++ A+
Sbjct:  204 IPLRQRLRYGENPHQQAAW 222          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_STRMK (Bifunctional purine biosynthesis protein purH OS=Stenotrophomonas maltophilia (strain K279a) GN=purH PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.894e-40
Identity = 90/203 (44.33%), Postives = 123/203 (60.59%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWK--AFQHVASYDSAVSEWLWKQTAGEDKFPSK 714
            ++AL+S+SDK  L  L   L   G  ++STGGTA ++ + G++V  V  +T FPEM+DGRVKTLHP +HGG+L R      +  ++EHGIG  DL+V+NLYPF + VT+       D +ENIDIGGPAM+R+AAKN   V V  D   Y  LL  L  N        + A+   AF  VA YD+A+S +L   TA +   P++
Sbjct:    9 RRALLSVSDKTGLVELATALAARGVELLSTGGTAKAIRDAGLAVKDVADVTGFPEMMDGRVKTLHPMVHGGLLGRSGLDDAV--MAEHGIGAIDLLVLNLYPF-ESVTAKADCTLADAVENIDIGGPAMLRSAAKNFARVAVATDPSQYAELLASLDANDGQLSASTRFAFSVAAFNRVAQYDAAISNYLSAVTATDAAVPAR 208          

HSP 2 Score: 23.0978 bits (48), Expect = 3.894e-40
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+  AF
Sbjct:  227 YGENPHQSGAF 237          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_STRM5 (Bifunctional purine biosynthesis protein purH OS=Stenotrophomonas maltophilia (strain R551-3) GN=purH PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.894e-40
Identity = 90/201 (44.78%), Postives = 122/201 (60.70%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWK--AFQHVASYDSAVSEWLWKQTAGEDKFP 708
            ++AL+S+SDK  L  L   L   G  ++STGGTA ++ + G++V  V  +T FPEM+DGRVKTLHP +HGG+L R      +  ++EHGIG  DL+V+NLYPF + VT+       D +ENIDIGGPAM+R+AAKN   V V  D   Y  LL  L+ N        + A+   AF  VA YD+A+S +L   TA +   P
Sbjct:    9 RRALLSVSDKTGLVELATALAARGVELLSTGGTAKAIRDAGLAVKDVADVTGFPEMMDGRVKTLHPMVHGGLLGRSGLDDAV--MAEHGIGAIDLLVLNLYPF-ESVTAKADCSLADAVENIDIGGPAMLRSAAKNFARVAVATDPSQYAELLASLEANNGQLTAATRFAFSVAAFNRVAQYDAAISNYLSAVTATDTAVP 206          

HSP 2 Score: 23.0978 bits (48), Expect = 3.894e-40
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+  AF
Sbjct:  227 YGENPHQSGAF 237          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_NITOC (Bifunctional purine biosynthesis protein purH OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=purH PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.658e-40
Identity = 96/232 (41.38%), Postives = 139/232 (59.91%), Query Frame = 1
Query:  115 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDK--FPSKRHSAS*TQKFSSLW*KSP-QKACFYVEK 795
            +ALIS+SDK  +      LQ  G  I+STGG+A  L+ + +  T++   T FPEM+ GR+KTLHP IHGGIL RR+       ++E+ I   DLV VNLYPF ++  +    D    IENIDIGGP ++RAAAKNH  V V+VD +DY  +L  ++ N        R +LA K+F+H A YD+ ++ +L   T   +K  FP + ++    +K    + ++P Q+A FYVE+
Sbjct:    6 RALISVSDKTGIVPFAHRLQARGVKILSTGGSAQLLQKNNIGATEISTYTGFPEMMGGRIKTLHPKIHGGILGRRET--DATTMAEYNIAPIDLVAVNLYPF-EQTVAKPDCDLATAIENIDIGGPTLLRAAAKNHAAVTVIVDPDDYERVLREMEANGGALSSSTRFELAVKSFEHTARYDATIANYLGALTPNGEKSAFP-RSYNIQFAKKQEMRYGENPHQRAAFYVEQ 233          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_THEEB (Bifunctional purine biosynthesis protein purH OS=Thermosynechococcus elongatus (strain BP-1) GN=purH PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.612e-40
Identity = 95/195 (48.72%), Postives = 121/195 (62.05%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGL-QELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQ-QFRRKLAWKAFQHVASYDSAVSEWLWKQTA 690
            + AL+S S+K+ L  L   L QE G+T++S+GGTA +L+  G+ VT V + T  PE+L GRVKTLHP IHGGILARRD+      L    I   DLVVVNLYPF + +     +   + IE IDIGGP +IRAAAKNH  V V+VD   Y   L+ L+   D Q  FR   A +AF   A YD A++E+L K TA
Sbjct:    3 RMALLSTSNKQGLVELARALVQEFGFTLLSSGGTAKALQTAGIPVTTVSEYTGAPEILGGRVKTLHPKIHGGILARRDRPQDEADLQAQAIHPIDLVVVNLYPFAETIAQP-NVTLAEAIEQIDIGGPTLIRAAAKNHAHVTVLVDPSQYETYLQELRLYGDAQPAFRLACAQQAFALTAHYDQAIAEYLQKVTA 196          

HSP 2 Score: 21.557 bits (44), Expect = 6.612e-40
Identity = 9/26 (34.62%), Postives = 14/26 (53.85%), Query Frame = 2
Query:  707 PPSVTVPLELKSSPPYGENPHRKPAF 784
            PP   +    K    YGENPH++ ++
Sbjct:  205 PPVFHLTGRQKQVLRYGENPHQRASW 230          
The following BLAST results are available for this feature:
BLAST of DY260088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_LEPBA1.352e-4044.83Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_NATTJ1.352e-4046.57Bifunctional purine biosynthesis protein purH OS=N... [more]
PUR9_PROAC1.489e-4048.13Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_BARQU2.988e-4047.09Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_PROMM2.990e-4048.66Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_PROM32.990e-4048.66Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_STRMK3.894e-4044.33Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_STRM53.894e-4044.78Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_NITOC5.658e-4041.38Bifunctional purine biosynthesis protein purH OS=N... [more]
PUR9_THEEB6.612e-4048.72Bifunctional purine biosynthesis protein purH OS=T... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260088 ID=DY260088; Name=DY260088; organism=Citrus clementina; type=EST; length=1054bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAACAGACTGCTGGAGAAGATA
AATTCCCCTCCAAGCGTCACAGTGCCTCTTGAACTCAAAAGTTCTCCTCC
TTATGGTGAAAATCCCCACAGAAAGCCTGCTTTTATGTTGAAAAAATTCT
TGCCGAGGTTAATGCTGGTGGTATTGCTACCGCTATTCCCCCCCCTGGGA
AAGGAAAAGGCCCAATACCAACCATTTAGAACCTGAAGGCGCTTGGAATT
GCGCTACCAAATTTTAAAAAACCCACTTTGTGGTATTTGAAAACCAAAAA
AATCCCCGGGGGGGAACCTTCCCGTGATGAAATTCCTTGAGGGCCTAAAA
CCCGGGGCCGGGAAAACCCAAACCCCTTTTATTGGCCTTTGGGGGGGATT
TGGG
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