DY260088

Overview
NameDY260088
Unique NameDY260088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SHEDO (Bifunctional purine biosynthesis protein purH OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=purH PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.390e-40
Identity = 102/249 (40.96%), Postives = 143/249 (57.43%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQ--QFRRKLAWKAFQHVASYDSAVSEWLWKQTAGE----DKFPSKRHSAS*TQKFSSLW*K---------SPQKACFYVEKILAEVN 813
            ++AL+S+SDK  +      L   G  ++STGGTA  L   G+ V +    T  PE++DGRVKTLHP IHGGILARR Q   +  ++E+ I   DLVVVNLYPF   V +       D +ENIDIGGP M+RAAAKNH+DV +VV++ DY  +L  +K NQ     + R +LA  AF+H A+YD  ++ +     A +    D+  +    +S  + F+S + K         S QKA FYV+  + E +
Sbjct:    8 RRALLSVSDKTGILEFAQALHAHGVELLSTGGTARLLAEHGLPVIEASDHTGHPEIMDGRVKTLHPKIHGGILARRGQDEAV--MAENNILPIDLVVVNLYPFASTVANP-DCTLADAVENIDIGGPTMVRAAAKNHQDVTIVVNASDYARVLAEMKTNQGSTTLKIRFELAVAAFEHTAAYDGMIANYFGNLVAMDADTSDEQQALHQESSFPRTFNSQFIKKQDLRYGENSHQKAAFYVDPQIDEAS 253          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_ACAM1 (Bifunctional purine biosynthesis protein purH OS=Acaryochloris marina (strain MBIC 11017) GN=purH PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.390e-40
Identity = 98/204 (48.04%), Postives = 125/204 (61.27%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGL-QELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVT--SAGGID-----FEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQ--FRRKLAWKAFQHVASYDSAVSEWLWKQTAGED 699
            AL+S SDK  L  L   L  E G+T+VS+GGTA ++E  G+ VTKV   T  PE+L GRVKTLHP IHGGILARR  +  +  L+E+ I   DLVVVNLYPF + +    A GI        D +E IDIGGP MIRAAAKNH  V V+ D + Y + L+ LK  + +    FR+  A K F+ +ASYD A++  L +  A  D
Sbjct:    5 ALLSTSDKTGLVELAQQLVNEYGFTLVSSGGTAVTIEKAGLPVTKVSDYTGSPEILGGRVKTLHPRIHGGILARRSLESDVQDLTENNIQGIDLVVVNLYPFEETIAKQKAQGITDPDQALADAVEQIDIGGPTMIRAAAKNHAHVTVLCDPQQYASYLQELKHGEGETSLPFRQACALKVFERMASYDRAIATHLRQSLATTD 208          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SHEON (Bifunctional purine biosynthesis protein purH OS=Shewanella oneidensis GN=purH PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.122e-39
Identity = 90/189 (47.62%), Postives = 118/189 (62.43%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDD--QQFRRKLAWKAFQHVASYDSAVSEW 672
            ++AL+S+SDK  +      L   G  ++STGGTA  L ++GV V +V   T  PE++DGRVKTLHP +HGGILARR    ++  ++ + I   DLV VNLYPF D V  A G   ED IENIDIGGP M+RAAAKNHKDV +VV++ DY  +L  +  N        R  LA  AF+H A YD  ++ +
Sbjct:   11 RRALLSVSDKTGILEFAKALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGGILARRGLDENV--MAANNINAIDLVAVNLYPFADTVAKA-GCTLEDAIENIDIGGPTMVRAAAKNHKDVTIVVNAADYNRVLAEMAVNNGSTTHATRFDLAIAAFEHTAGYDGMIANY 196          

HSP 2 Score: 21.557 bits (44), Expect = 1.122e-39
Identity = 10/26 (38.46%), Postives = 12/26 (46.15%), Query Frame = 2
Query:  707 PPSVTVPLELKSSPPYGENPHRKPAF 784
            P +    L  K    YGEN H+  AF
Sbjct:  227 PRTFNTQLVKKQDLRYGENSHQAAAF 252          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_CHLTE (Bifunctional purine biosynthesis protein purH OS=Chlorobium tepidum GN=purH PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.122e-39
Identity = 86/192 (44.79%), Postives = 119/192 (61.98%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLK--GNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWK 681
            K+AL+S+SDK  +      L  +   I STGGT   L+  G+    +  +T FPE++DGRVKTLHP IHGG+LA RD   H  A  E+GI   DLVVVNLYPF   +  A  + FE+ IENIDIGGP+M+R+AAKN++ V VV D  DY  +L+ ++  G    +  R  LA K +   + YD+A++ ++ K
Sbjct:    7 KRALVSVSDKTGIVDFCRELASMDVEIFSTGGTLKLLQGAGIVAQSISTITGFPEIMDGRVKTLHPKIHGGLLAVRDNAEHQKAARENGIQFIDLVVVNLYPFEATIAKA-DVTFEEAIENIDIGGPSMLRSAAKNNESVTVVTDVADYATVLDEMRSNGGATTRATRLTLAAKVYALTSRYDTAIAAYMAK 197          

HSP 2 Score: 25.0238 bits (53), Expect = 1.122e-39
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  713 SVTVPLELKSSPPYGENPHR 772
            ++T+ LE + S  YGENPH+
Sbjct:  207 TMTLKLEKELSMRYGENPHQ 226          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_CLOBA (Bifunctional purine biosynthesis protein purH OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=purH PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.261e-39
Identity = 91/200 (45.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFP 708
            K+ALIS+ +K  +      L      IVSTGGT   L+ +G+ V ++ ++T FPEMLDGRVKTLHP +H GILA RD K HM  L E  I T D VVVNLYPF++KV     + FE+ +E IDIGGP M+RAAAKN +DV V+ +  DY  +  E     Q   + ++KLA K F  +++YD A++ ++    A E+++P
Sbjct:    3 KRALISVFNKDGVLDFAEFLVSKDIEIVSTGGTYKYLKENGIDVIEINEVTNFPEMLDGRVKTLHPLVHAGILAIRDNKEHMKVLEEREIHTIDYVVVNLYPFFEKVKE--DLTFEEKVEFIDIGGPTMLRAAAKNFQDVTVISNINDYEVVKNEIENAGQVSLKTKKKLAGKVFNLMSAYDGAIANFM---LADEEEYP 197          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_CHLL2 (Bifunctional purine biosynthesis protein purH OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=purH PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.646e-39
Identity = 94/228 (41.23%), Postives = 136/228 (59.65%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLK--GNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSP-QKACFY 786
            K+AL+S+SDK  +      L  LG  I STGGT  +L++ GV+   +  +T FPE++DGRVKTLHP IHGG+LA R+   H+    E+GIG  D+VVVNLYPF +   +   + FED IENIDIGGP+M+R+AAKN++ V V+ DS DY  +L  ++       +  R  LA K F   + YD A++ +L      E +  +   + S  ++    + ++P Q A FY
Sbjct:    7 KRALVSVSDKTGIVDFCRELSLLGVEIFSTGGTLKTLQDAGVAAASISTITGFPEIMDGRVKTLHPKIHGGLLAVRENADHVKQALENGIGFIDMVVVNLYPF-EATVAKPDVTFEDAIENIDIGGPSMLRSAAKNNESVTVLTDSADYAQVLGEMRAGAGATTRATRLMLARKVFALTSRYDRAIAAYLTGAAGAEVEGAAAGMTVSLEKELDMRYGENPHQNAGFY 233          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BAUCH (Bifunctional purine biosynthesis protein purH OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=purH PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.905e-39
Identity = 89/193 (46.11%), Postives = 126/193 (65.28%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEWLWKQ 684
            ++AL+S+SDK ++  L   L + G  ++ST GTA  L N G+ VT+V   T FPE++DGRVKTLHP IHGGILARR+    +  + ++ I   D+VVVNLYPF + V SA   + E  +ENIDIGG A++R+AAKN+ +V+VVV   DY +++  +  N      + R  LA KAFQH A+YDS + ++   Q
Sbjct:    8 RRALLSVSDKTNICELAKSLLKRGVQLISTNGTARLLVNAGIHVTEVSNYTGFPEIMDGRVKTLHPKIHGGILARRNIDDTI--MQQYKIEHIDMVVVNLYPFAEVVASA-TCNHEKVVENIDIGGTALLRSAAKNYSNVVVVVSINDYISIINEIDCNNGAVSLETRLNLAIKAFQHTATYDSQIKDYFTSQ 197          

HSP 2 Score: 25.0238 bits (53), Expect = 1.905e-39
Identity = 11/28 (39.29%), Postives = 14/28 (50.00%), Query Frame = 2
Query:  707 PPSVTVPLELKSSPPYGENPHRKPAFML 790
            PP + +    K    YGEN H+  AF L
Sbjct:  210 PPILNINFVKKQDMRYGENQHQLAAFYL 237          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_ELUMP (Bifunctional purine biosynthesis protein purH OS=Elusimicrobium minutum (strain Pei191) GN=purH PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.905e-39
Identity = 87/188 (46.28%), Postives = 117/188 (62.23%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQF--RRKLAWKAFQHVASYDSAVSE 669
            K+ALIS+SDK  L     GL +LG  +VST GTA  L+  G+ V  +  LT FPE+LDGRVKTLHP +HG IL +RD   H   + + GI   D++VVNLYPF +    A      + IENIDIGGP+M+R+AAKN   V V+   +DY  +L  +  +Q    +  R++L  +AF H A YD+A+SE
Sbjct:    8 KRALISVSDKTGLEVFAKGLHKLGVELVSTSGTAKFLKAAGLPVRDLSDLTGFPEILDGRVKTLHPRVHGAILYKRDDDAHCKVIKDMGIEDIDMLVVNLYPFRETAAKAKHSFDAEVIENIDIGGPSMLRSAAKNFAHVAVLCRPKDYEVVLSEMAASQGALSYATRQRLCVEAFTHTAEYDAAISE 195          

HSP 2 Score: 24.6386 bits (52), Expect = 1.905e-39
Identity = 12/30 (40.00%), Postives = 14/30 (46.67%), Query Frame = 2
Query:  707 PPSVTVPLELKSSPPYGENPHRKPAFMLKK 796
            P S  V L       YGENPH+K     +K
Sbjct:  206 PESKIVVLHKTQDLRYGENPHQKAVLYSQK 235          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_CLOBB (Bifunctional purine biosynthesis protein purH OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=purH PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.150e-39
Identity = 89/200 (44.50%), Postives = 128/200 (64.00%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN-QDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFP 708
            K+ALIS+ +K  +      L      IVSTGGT   L+ +G+ V ++ ++T FPEMLDGRVKTLHP +H GILA RD K HM  L E  I T D VVVNLYPF++KV     + FE+ +E IDIGGP M+RAAAKN +DV+V+ +  DY  +   +K + Q   + ++KL+ K F  +++YD A++ ++      E+++P
Sbjct:    3 KRALISVFNKDGVLDFAKFLVSKDIEIVSTGGTYKYLKENGIDVIEINEVTNFPEMLDGRVKTLHPLVHAGILAIRDNKEHMKVLEEREIHTIDYVVVNLYPFFEKVKE--DLTFEEKVEFIDIGGPTMLRAAAKNFQDVVVISNINDYEVVKSEIKNDGQVSLKTKKKLSGKVFNLMSAYDGAIANFM---LGDEEEYP 197          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BIFLO (Bifunctional purine biosynthesis protein purH OS=Bifidobacterium longum GN=purH PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.150e-39
Identity = 95/200 (47.50%), Postives = 116/200 (58.00%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL---WKQTAGED 699
            ++AL+S+  K+ +  L     + G  +VSTG TA  L   GV VT+V  +T FPE LDGRVKTLHP IH GILA      H   L E GI  FDLVVVNLYPF D V S  G +  D IE IDIGGP+M+R AAKNH  V +V D  DY  +      G       R+ LA KAF H A+YD+ ++EW    W + A  D
Sbjct:    9 RRALVSVFHKEGIEVLAEAFVKAGTEVVSTGSTAKKLAELGVKVTEVSDVTGFPECLDGRVKTLHPYIHAGILADMTNPEHAKQLEEFGIKPFDLVVVNLYPFADTVRS--GANEADTIEKIDIGGPSMVRGAAKNHATVAIVTDPADYALVASRVADGTGFSLDERKWLAAKAFAHTAAYDATINEWTAKHWPKPASLD 206          
The following BLAST results are available for this feature:
BLAST of DY260088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_SHEDO7.390e-4040.96Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_ACAM17.390e-4048.04Bifunctional purine biosynthesis protein purH OS=A... [more]
PUR9_SHEON1.122e-3947.62Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_CHLTE1.122e-3944.79Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_CLOBA1.261e-3945.50Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_CHLL21.646e-3941.23Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_BAUCH1.905e-3946.11Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_ELUMP1.905e-3946.28Bifunctional purine biosynthesis protein purH OS=E... [more]
PUR9_CLOBB2.150e-3944.50Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_BIFLO2.150e-3947.50Bifunctional purine biosynthesis protein purH OS=B... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260088 ID=DY260088; Name=DY260088; organism=Citrus clementina; type=EST; length=1054bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAACAGACTGCTGGAGAAGATA
AATTCCCCTCCAAGCGTCACAGTGCCTCTTGAACTCAAAAGTTCTCCTCC
TTATGGTGAAAATCCCCACAGAAAGCCTGCTTTTATGTTGAAAAAATTCT
TGCCGAGGTTAATGCTGGTGGTATTGCTACCGCTATTCCCCCCCCTGGGA
AAGGAAAAGGCCCAATACCAACCATTTAGAACCTGAAGGCGCTTGGAATT
GCGCTACCAAATTTTAAAAAACCCACTTTGTGGTATTTGAAAACCAAAAA
AATCCCCGGGGGGGAACCTTCCCGTGATGAAATTCCTTGAGGGCCTAAAA
CCCGGGGCCGGGAAAACCCAAACCCCTTTTATTGGCCTTTGGGGGGGATT
TGGG
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