DY260088

Overview
NameDY260088
Unique NameDY260088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BIFLD (Bifunctional purine biosynthesis protein purH OS=Bifidobacterium longum (strain DJO10A) GN=purH PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.150e-39
Identity = 95/200 (47.50%), Postives = 116/200 (58.00%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL---WKQTAGED 699
            ++AL+S+  K+ +  L     + G  +VSTG TA  L   GV VT+V  +T FPE LDGRVKTLHP IH GILA      H   L E GI  FDLVVVNLYPF D V S  G +  D IE IDIGGP+M+R AAKNH  V +V D  DY  +      G       R+ LA KAF H A+YD+ ++EW    W + A  D
Sbjct:    9 RRALVSVFHKEGIEVLAEAFVKAGTEVVSTGSTAKKLAELGVKVTEVSDVTGFPECLDGRVKTLHPYIHAGILADMTNPEHAKQLEEFGIKPFDLVVVNLYPFADTVRS--GANEADTIEKIDIGGPSMVRGAAKNHATVAIVTDPADYALVASRVADGTGFSLDERKWLAAKAFAHTAAYDATINEWTAKHWPKPASLD 206          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BARHE (Bifunctional purine biosynthesis protein purH OS=Bartonella henselae GN=purH PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.150e-39
Identity = 97/227 (42.73%), Postives = 133/227 (58.59%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQF--RRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKACFY 786
            ++ L+S+SDK  + +    LQ     ++STGGTA  L   G+ V  V ++T FPE++DGRVKTLHP IHG +L  R+   H  A+ ++GI   DL+VVNLYPF + V S  G D +  +ENIDIGGPAMIRAAAKNH    V+    DY A+L  LK +     F  R++LA +A+ H A+YD+A++ W  K    E   PS +  +   +          QKA FY
Sbjct:   17 RRVLLSVSDKTGIVAFAQALQTYNVELISTGGTAKVLMAAGLPVRDVAEVTGFPEIMDGRVKTLHPLIHGALLGVREDPSHAVAMEQYGIHGIDLLVVNLYPFEETVQS--GADGQTILENIDIGGPAMIRAAAKNHVYTGVITAVSDYDAVLSELKQHDGCLSFSMRQQLAMRAYAHTAAYDTAIAAWFAKNLKIET--PSWQSFSGHLKNVMRYGENPHQKAAFY 239          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SYNPW (Bifunctional purine biosynthesis protein purH OS=Synechococcus sp. (strain WH7803) GN=purH PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.482e-39
Identity = 93/189 (49.21%), Postives = 116/189 (61.38%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGLQE-LGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFL--KGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            AL+S+SDK  L  L   L E  GY ++S+GGTA  L+  G+ VT V   T  PE+L GRVKTLHP IHGGILARR    H   L    I   D+VVVNLYPF + V S   + +E  IENIDIGGP M+R+AAKNH  V V+ D + Y   L+ L   G       RR+LA  AF H A+YD+A++ W+
Sbjct:    5 ALLSVSDKSGLLPLAKTLHERYGYQLLSSGGTAKVLQEAGLPVTPVADHTGAPEILGGRVKTLHPRIHGGILARRGDPAHEADLQAQQITPIDVVVVNLYPFRETV-SDPAVSWERAIENIDIGGPTMVRSAAKNHDHVAVLTDPDQYDRFLQDLAASGGAVSAAVRRRLALDAFAHTAAYDAAITRWM 192          

HSP 2 Score: 21.9422 bits (45), Expect = 2.482e-39
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2
Query:  728 LELKSSPPYGENPHRKPAF 784
            L L+    YGENPH+  A+
Sbjct:  215 LPLRQRLRYGENPHQGAAW 233          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_TRIEI (Bifunctional purine biosynthesis protein purH OS=Trichodesmium erythraeum (strain IMS101) GN=purH PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.668e-39
Identity = 92/203 (45.32%), Postives = 128/203 (63.05%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGL-QELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDD--QQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKR 717
            AL+S SDK  L  L   L  E  Y I+S+GGTA +L++ G+ VTKV   T FPE+L GRVKTLHP IHGGILAR+D    ++ L+ + I   DLVVVNLYPF ++  S   +   + IE IDIGGPAM+RA+AKN   + V+ +   Y + LE L+ N  +   +FR+K A   F+H A+YD A++ +L +Q    +   S++
Sbjct:    5 ALLSTSDKTGLIDLAKSLVTEFDYEIISSGGTAKTLKDAGIYVTKVSDYTGFPEILGGRVKTLHPRIHGGILARKDLPQDVEELNANNIRPIDLVVVNLYPF-EETISKPEVTLAEAIEKIDIGGPAMLRASAKNFAHLTVLCNHFQYNSYLEELRKNAGEVSLEFRQKCALAGFKHTATYDQAIATYLQEQQTTSESEKSEK 206          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_ALTMD (Bifunctional purine biosynthesis protein purH OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=purH PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 8.170e-39
Identity = 102/247 (41.30%), Postives = 138/247 (55.87%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQF--RRKLAWKAFQHVASYDSAVSEWLWKQTAG----------EDKFPSKRHSAS*TQKFSSLW*K-SPQKACFYVEKILAEVN 813
            K+AL+S+SDK  +      L   G  ++STGGTA  L   G+ V +V   T  PE++ GRVKTLHP IHGGILARR     +  + E+ I   DLVVVNLYPF   V +      ED IENIDIGGP M+RAAAKNHKDV +VV++ DY  +L  +  N     +  R  LA KAF+H A YD  ++ +   +               +FP + ++   T+K    + + S Q+A FYVE  + E +
Sbjct:    8 KRALLSVSDKTGILDFATALHNAGVELLSTGGTAKLLAEAGLPVKEVSDHTGHPEIMAGRVKTLHPKIHGGILARRGVDEAV--MEENNIAPIDLVVVNLYPFAATVANE-DCTLEDAIENIDIGGPTMVRAAAKNHKDVTIVVNAADYSRVLAEMNDNNGSLTYSTRFDLAIKAFEHTAEYDGMIANYFGARLDSTGCEADCDHQHSEFP-RTYNIQLTKKQDLRYGENSHQEAAFYVENNIQEAS 250          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SORC5 (Bifunctional purine biosynthesis protein purH OS=Sorangium cellulosum (strain So ce56) GN=purH PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.060e-38
Identity = 94/189 (49.74%), Postives = 117/189 (61.90%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            ++ALIS+SDK  L  L   L E G  I+STGGT  +L + GV V  VE  T  PE++DGRVKTLHP +HGGIL R       + L+  G    DLVV NLYPF +      G+   + IENIDIGGP+M+R+AAKNH  V VVVD  DY A+L E  +  +     RR+LA KAF H A+YD  VS +L
Sbjct:    3 RRALISVSDKTGLLPLARRLAEKGVEILSTGGTQRALADAGVPVIGVEAYTGSPEVMDGRVKTLHPRVHGGILMRGAIDD--EDLARLGGAPIDLVVCNLYPF-EATVRKPGVTHPEIIENIDIGGPSMVRSAAKNHARVAVVVDPADYDAVLAEIDRQGEVSSATRRRLATKAFAHTAAYDGMVSGYL 188          

HSP 2 Score: 25.7942 bits (55), Expect = 2.060e-38
Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 2
Query:  707 PPSVTVPLELKSSPPYGENPHRKPAF 784
            P  +T+ LE      YGENPH+  AF
Sbjct:  206 PRFLTLALERAYPLRYGENPHQSGAF 231          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SHEHH (Bifunctional purine biosynthesis protein purH OS=Shewanella halifaxensis (strain HAW-EB4) GN=purH PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.377e-38
Identity = 98/244 (40.16%), Postives = 138/244 (56.56%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQ--QFRRKLAWKAFQHVASYDSAVSEWLW-------KQTAGED-KFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAEVN 813
            ++AL+S+SDK  +      L   G  ++STGGTA  L ++GV V +V   T  PE++DGRVKTLHP +HGGILARR     +  + ++ I   DLV VNLYPF   V +A G    D IENIDIGGP M+R+ AKNHKD  ++V++ DY  ++  ++ NQ     + R  LA  AF+H A+YD  ++ +         K    ED KFP   ++    ++       S Q A FYV+  L E +
Sbjct:    8 RRALLSVSDKTGILEFAQALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGGILARRGIDEIV--MEQNNIKPIDLVAVNLYPFAATV-AAEGCTLADAIENIDIGGPTMVRSTAKNHKDTTIIVNANDYGRVIAEMQANQGSTTLETRFDLAIAAFEHTAAYDGMIANYFGTKVPAHSKDECHEDSKFPRTYNTQLVKKQDLRYGENSHQTAAFYVDTHLDEAS 248          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SHEPW (Bifunctional purine biosynthesis protein purH OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=purH PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.055e-38
Identity = 95/244 (38.93%), Postives = 137/244 (56.15%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQ--QFRRKLAWKAFQHVASYDSAVSEWLW-------KQTAGED-KFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAEVN 813
            ++AL+S+SDK  +      L   G  ++STGGTA  L ++GV V +V   T  PE++DGRVKTLHP +HGGILARR     +  + ++ I   DLV VNLYPF + V    G    D +ENIDIGGP M+R+ AKNHKD  ++V++ DY  ++  ++ N+     + R  LA  AF+H A+YD  ++ +         K    ED KFP   ++    ++       S Q A FYV+  L E +
Sbjct:    8 RRALLSVSDKTGILEFAQALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGGILARRGIDELV--MEQNNINPIDLVAVNLYPFAETVAKE-GCTLADAVENIDIGGPTMVRSTAKNHKDTTIIVNASDYGRVIAEMQANEGSTTLETRFDLAIAAFEHTAAYDGMIANYFGTKVPAHSKDECHEDSKFPRTYNTQLVKKQDLRYGENSHQTAAFYVDTNLDEAS 248          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SHELP (Bifunctional purine biosynthesis protein purH OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=purH PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.296e-38
Identity = 92/244 (37.70%), Postives = 136/244 (55.74%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQ--QFRRKLAWKAFQHVASYDSAVSEWLWKQTAG--------EDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAEVN 813
            ++AL+S+SDK  +      L   G  ++STGGTA  L ++GV V +V   T  PE++DGRVKTLHP +HGGIL RR     +  + ++ I   DLV VNLYPF + V    G    D +ENIDIGGP M+R+ AKNHKD  +VV+++DY  +++ ++ NQ     + R  LA  AF+H A+YD  ++ +               + KFP   ++    ++       S Q A FYV+  + E +
Sbjct:    8 RRALLSVSDKTGILEFAQALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGGILGRRGIDEIV--MEQNAIKPIDLVAVNLYPFAETVAKE-GCTLADAVENIDIGGPTMVRSTAKNHKDTTIVVNAKDYDRVIQEMQANQGSTTLETRFDLAIAAFEHTAAYDGMIANYFGTMVPAHSQDECHQDSKFPRTYNTQLVKKQDLRYGENSHQSAAFYVDLNIDEAS 248          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_ANAVT (Bifunctional purine biosynthesis protein purH OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=purH PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.007e-37
Identity = 88/189 (46.56%), Postives = 120/189 (63.49%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGL-QELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEWL 675
            AL+S+S+K  L  L   L +E  + ++S+GGTA +L++ G+ VTKV   T  PE+L GRVKTLHP IHGGILARRD    +  L  + I   DLVVVNLYPF + +    G+   + +E IDIGGPAM+RA++KN   + V+ D   Y   L+ L+ N      +FR+K A K F H ASYDSA++ +L
Sbjct:    5 ALLSVSNKTGLIDLARRLVEEFEFDLISSGGTAQALKDAGLPVTKVADYTGSPEILGGRVKTLHPRIHGGILARRDVPSDLTDLENNQIRPIDLVVVNLYPFEETIAKP-GVTLAEAVEQIDIGGPAMLRASSKNFAHLTVLCDPAQYDEYLQELRQNNGVASLEFRQKAALKGFLHTASYDSAIASYL 192          

HSP 2 Score: 21.1718 bits (43), Expect = 1.007e-37
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+  A+
Sbjct:  210 YGENPHQPAAW 220          
The following BLAST results are available for this feature:
BLAST of DY260088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_BIFLD2.150e-3947.50Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_BARHE2.150e-3942.73Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_SYNPW2.482e-3949.21Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_TRIEI3.668e-3945.32Bifunctional purine biosynthesis protein purH OS=T... [more]
PUR9_ALTMD8.170e-3941.30Bifunctional purine biosynthesis protein purH OS=A... [more]
PUR9_SORC52.060e-3849.74Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_SHEHH2.377e-3840.16Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_SHEPW4.055e-3838.93Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_SHELP5.296e-3837.70Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_ANAVT1.007e-3746.56Bifunctional purine biosynthesis protein purH OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260088 ID=DY260088; Name=DY260088; organism=Citrus clementina; type=EST; length=1054bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAACAGACTGCTGGAGAAGATA
AATTCCCCTCCAAGCGTCACAGTGCCTCTTGAACTCAAAAGTTCTCCTCC
TTATGGTGAAAATCCCCACAGAAAGCCTGCTTTTATGTTGAAAAAATTCT
TGCCGAGGTTAATGCTGGTGGTATTGCTACCGCTATTCCCCCCCCTGGGA
AAGGAAAAGGCCCAATACCAACCATTTAGAACCTGAAGGCGCTTGGAATT
GCGCTACCAAATTTTAAAAAACCCACTTTGTGGTATTTGAAAACCAAAAA
AATCCCCGGGGGGGAACCTTCCCGTGATGAAATTCCTTGAGGGCCTAAAA
CCCGGGGCCGGGAAAACCCAAACCCCTTTTATTGGCCTTTGGGGGGGATT
TGGG
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