DY260088

Overview
NameDY260088
Unique NameDY260088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_CYAP4 (Bifunctional purine biosynthesis protein purH OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=purH PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.433e-37
Identity = 98/223 (43.95%), Postives = 128/223 (57.40%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGL-QELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQ--FRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDKFPSKRHSAS*TQKFSSLW*KSPQKA 777
            AL+S SDK  +      L  E G+ ++S+GGTA +L   G+ VTKV   T  PE+L GRVKTLHP IHGGILARRD    +  L+  GI   DLVVVNLYPF ++  +   +   D IE IDIGGPA++RA+AKN   V V+   E Y   L  L+  Q      FR+  A KAF H A+YD A++ +L      E   P  R S + TQ  S  + ++P +A
Sbjct:    5 ALLSTSDKTGVVEFARSLVNEFGFQLISSGGTAKALIAAGLPVTKVADYTGSPEILGGRVKTLHPRIHGGILARRDLPTDLQDLAATGIEPIDLVVVNLYPF-EQTIAQPDMTLSDAIEQIDIGGPALLRASAKNFAHVTVLCSPEQYGPCLAELRQQQGQTSLIFRQSCAQKAFWHTATYDQAIATYLTSSDPTEISLP-PRLSVTATQFQSLRYGENPHQA 225          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BART1 (Bifunctional purine biosynthesis protein purH OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=purH PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 3.776e-37
Identity = 83/190 (43.68%), Postives = 119/190 (62.63%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQEL-GYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEW 672
            ++ L+S+SDK  + +    L       ++STGGTA +L   G+ V  V ++T FPE++DGRVKTLHP IHG +L  R+   H +A+ ++ I   DL+VVNLYPF + + S  G D +  +ENIDIGGPAMIRAAAKN+    VV    DY ++L  LK +        R +LA +A+ H A+YD+A++ W
Sbjct:   17 RRILLSVSDKTGVVAFAQALHATYSVELISTGGTAKTLIAAGLPVKDVSEVTGFPEIMDGRVKTLHPLIHGALLGIREDPSHREAMEKNSIHGIDLLVVNLYPFEETIQS--GADGKTILENIDIGGPAMIRAAAKNYAYTGVVTAINDYDSILAELKQHNGCLSLSMRHQLAMRAYAHTAAYDTAIAAW 204          

HSP 2 Score: 27.335 bits (59), Expect = 3.776e-37
Identity = 13/30 (43.33%), Postives = 18/30 (60.00%), Query Frame = 2
Query:  695 KINSPPSVTVPLELKSSPPYGENPHRKPAF 784
            KI +P   +    L+S   YGENPH++ AF
Sbjct:  210 KIETPSWQSFSGHLESVMRYGENPHQQAAF 239          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SYNE7 (Bifunctional purine biosynthesis protein purH OS=Synechococcus elongatus (strain PCC 7942) GN=purH PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.855e-37
Identity = 90/192 (46.88%), Postives = 119/192 (61.98%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGLQE-LGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKG--NQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQ 684
            AL+S+SDK  L      L +   + IVS+GGTA  L   G+ VTKV + T  PE+L GRVKTLHP IHGGILARRD++     L+ + I  FDLVVVNLYPF +   +   +   D IE IDIGGPAM+RA+AKNH  + ++ +   Y   L  L     Q    FR++ A  AFQH A+YD+A++ +L +Q
Sbjct:    5 ALLSVSDKTGLVDFARQLVDRFQFQIVSSGGTAKQLLEAGIPVTKVAEHTGSPEILGGRVKTLHPRIHGGILARRDREEDQADLAANNIQPFDLVVVNLYPF-EATIARPEVTLADAIEQIDIGGPAMVRASAKNHAHLTILTNPSQYEPYLTALADGEGQIPLAFRQQCALAAFQHTAAYDAAIATYLAEQ 195          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_SHEFN (Bifunctional purine biosynthesis protein purH OS=Shewanella frigidimarina (strain NCIMB 400) GN=purH PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.855e-37
Identity = 92/244 (37.70%), Postives = 134/244 (54.92%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQ--QFRRKLAWKAFQHVASYDSAVSEWLWKQTAG--------EDKFPSKRHSAS*TQKFSSLW*KSPQKACFYVEKILAEVN 813
            ++AL+S+SDK  +      L   G  ++STGGTA  L ++ + V +V   T  PE++DGRVKTLHP IHGGILARR     +  + ++ I   DLV VNLYPF + V    G    D +ENIDIGGP M+R+ AKNHKD  +VV+++DY  ++  ++ N      + R  LA  AF+H A+YD  ++ +               +  FP   +S    ++       S QKA FYV+  + E +
Sbjct:    8 RRALLSVSDKTGILEFAQALHAQGVELLSTGGTAKLLADNNIPVMEVSDYTGHPEIMDGRVKTLHPKIHGGILARRGIDEIV--MEQNAIKPIDLVTVNLYPFAETVAKP-GCTLADAVENIDIGGPTMVRSTAKNHKDTTIVVNAKDYGRVIAEMQANNGSTTLETRFDLAIAAFEHTAAYDGMIANYFGTMVPAHSNDECHDDSTFPRTFNSQFVKKQDLRYGENSHQKAAFYVDTQIDEAS 248          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BUCAP (Bifunctional purine biosynthesis protein purH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=purH PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.855e-37
Identity = 89/233 (38.20%), Postives = 136/233 (58.37%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTAGEDK-----FPSKRHSAS*TQKFSSLW*KSPQKACFYVEK 795
            K AL+SLSDK DL  +   L E    +  TGGTA  L+ + + V ++   T FPE+++GR+KTLHP I GGIL RR++   +  L  H +   D+V+VN YPF +K+ +      E+ I+NIDIGGP ++RAAAKN+KDV+V+VD  D+ + ++ +  N    + R  LA KAF++ A Y+  +S++  K+     K     FP++       ++         QK+ FY+EK
Sbjct:    8 KNALVSLSDKTDLLKISKILAEKKINLFCTGGTADVLKKNKIPVLEISDYTNFPEIMNGRLKTLHPKIIGGILGRREKDQKIMKL--HNLIPIDIVIVNFYPF-EKIQNRKEFTIEEIIDNIDIGGPTLVRAAAKNYKDVIVIVDLSDFTSCIQLINTNTVSLETRFDLATKAFKYTALYEEIISKYFLKKNPYRKKHQKNIFPNEFQLNFIKKQDLRYGENQHQKSSFYIEK 237          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_BRAHW (Bifunctional purine biosynthesis protein purH OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=purH PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.855e-37
Identity = 87/198 (43.94%), Postives = 124/198 (62.63%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQ-TAGEDK 702
            K+ALIS+  K  +      L      IVSTGGT   L+ + + V +V ++T   EMLDGRVKTL P IHG ILA RD   HM+ + E GI   D+V+VNLYPF++KV     + FE+ IE IDIGGP M+R+AAK+ KDV+V+ D +DY  +   ++  +   + ++ LA K F   ++YD+AVSE+++    + EDK
Sbjct:    3 KRALISVFYKDGILDFAKFLTSKNVEIVSTGGTYKYLKENNIPVIEVSEVTGAKEMLDGRVKTLDPKIHGAILAIRDNPTHMETIKERGITPIDMVIVNLYPFFEKVQD-DNLKFEEKIEFIDIGGPTMLRSAAKSFKDVVVISDVKDYDLVKSEMEKGEVSFETKKYLASKVFNLTSAYDAAVSEFMFNSLESKEDK 199          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_XYLFA (Bifunctional purine biosynthesis protein purH OS=Xylella fastidiosa GN=purH PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.088e-36
Identity = 85/189 (44.97%), Postives = 117/189 (61.90%), Query Frame = 1
Query:  115 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN--QDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            +AL+S+SDK  L  L   L      ++STGGTAT +   G+ V  V  LT FPEM+DGRVKTLHP +HGG+L R      +  +++HGI   DL+++NLYPF +++T+       D ++ IDIGGPAM+R+AAKN   V V    + YP LL  L+ +  Q   + R  LA  AF HVA YD+A+S +L
Sbjct:   10 RALLSVSDKTGLVELARALLAYNIELLSTGGTATIIREAGLPVQDVADLTGFPEMMDGRVKTLHPMVHGGLLGRAGIDDAV--MAKHGIAPIDLLILNLYPF-EQITAKKDCTLADAVDTIDIGGPAMLRSAAKNFARVAVATSPDQYPDLLAELQAHHGQLSAEKRFALAVAAFNHVAQYDAAISNYL 195          

HSP 2 Score: 22.7126 bits (47), Expect = 1.088e-36
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+  AF
Sbjct:  227 YGENPHQTGAF 237          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_XYLFT (Bifunctional purine biosynthesis protein purH OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=purH PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.088e-36
Identity = 86/189 (45.50%), Postives = 117/189 (61.90%), Query Frame = 1
Query:  115 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN--QDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            +AL+S+SDK  L  L   L      ++STGGTAT +   G+ V  V  LT FPEM+DGRVKTLHP +HGG+L R      +  +++HGI   DL++VNLYPF +++T+       D ++ IDIGGPAM+R+AAKN   V V    + YP LL  L+ +  Q   + R  LA  AF HVA YD+A+S +L
Sbjct:   10 RALLSVSDKTGLVELARVLLAYNIELLSTGGTATIIREAGLPVQDVADLTDFPEMMDGRVKTLHPVVHGGLLGRAGIDDAV--MAKHGIAPIDLLIVNLYPF-EQITAKKDCTLADAVDTIDIGGPAMLRSAAKNFARVAVATSPDQYPDLLAELQAHHGQLSAEKRFALAVAAFNHVAQYDAAISNYL 195          

HSP 2 Score: 23.0978 bits (48), Expect = 1.088e-36
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+  AF
Sbjct:  227 YGENPHQSGAF 237          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_XYLF2 (Bifunctional purine biosynthesis protein purH OS=Xylella fastidiosa (strain M23) GN=purH PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.088e-36
Identity = 86/189 (45.50%), Postives = 117/189 (61.90%), Query Frame = 1
Query:  115 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN--QDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            +AL+S+SDK  L  L   L      ++STGGTAT +   G+ V  V  LT FPEM+DGRVKTLHP +HGG+L R      +  +++HGI   DL++VNLYPF +++T+       D ++ IDIGGPAM+R+AAKN   V V    + YP LL  L+ +  Q   + R  LA  AF HVA YD+A+S +L
Sbjct:   10 RALLSVSDKTGLVELARVLLAYNIELLSTGGTATIIREAGLPVQDVADLTDFPEMMDGRVKTLHPVVHGGLLGRAGIDDAV--MAKHGIAPIDLLIVNLYPF-EQITAKKDCTLADAVDTIDIGGPAMLRSAAKNFARVAVATSPDQYPDLLAELQAHHGQLSAEKRFALAVAAFNHVAQYDAAISNYL 195          

HSP 2 Score: 23.0978 bits (48), Expect = 1.088e-36
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+  AF
Sbjct:  227 YGENPHQSGAF 237          
BLAST of DY260088 vs. ExPASy Swiss-Prot
Match: PUR9_XANOR (Bifunctional purine biosynthesis protein purH OS=Xanthomonas oryzae pv. oryzae GN=purH PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.088e-36
Identity = 87/203 (42.86%), Postives = 118/203 (58.13%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWK--AFQHVASYDSAVSEWLWKQTAGEDKFPSK 714
            ++AL+S+SDK  L  L   L      ++STGGTA ++   G+ V  V +LT FPEM+DGRVKTLHP +HGG+L R      +  ++EHGI   DL+V+NLYPF + VT        D +ENIDIGGPAM+R+AAKN   V V  D   Y  LL  L+ N       ++ A    AF  VA YD+A+S +L       +  P++
Sbjct:    9 RRALLSVSDKTGLIDLARALVARNVELLSTGGTAKAIREAGLPVKDVAELTGFPEMMDGRVKTLHPLVHGGLLGRAGIDEAV--MAEHGIAPIDLLVLNLYPF-ESVTVKTDCTLADAVENIDIGGPAMLRSAAKNFARVAVATDPAQYADLLAELEANNGQLSAAKRFALSVAAFNRVAQYDAAISNYLSAVADSAETVPTR 208          

HSP 2 Score: 23.0978 bits (48), Expect = 1.088e-36
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  752 YGENPHRKPAF 784
            YGENPH+  AF
Sbjct:  227 YGENPHQSGAF 237          
The following BLAST results are available for this feature:
BLAST of DY260088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_CYAP43.433e-3743.95Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_BART13.776e-3743.68Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_SYNE75.855e-3746.88Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_SHEFN5.855e-3737.70Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_BUCAP5.855e-3738.20Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_BRAHW5.855e-3743.94Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_XYLFA1.088e-3644.97Bifunctional purine biosynthesis protein purH OS=X... [more]
PUR9_XYLFT1.088e-3645.50Bifunctional purine biosynthesis protein purH OS=X... [more]
PUR9_XYLF21.088e-3645.50Bifunctional purine biosynthesis protein purH OS=X... [more]
PUR9_XANOR1.088e-3642.86Bifunctional purine biosynthesis protein purH OS=X... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260088 ID=DY260088; Name=DY260088; organism=Citrus clementina; type=EST; length=1054bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAACAGACTGCTGGAGAAGATA
AATTCCCCTCCAAGCGTCACAGTGCCTCTTGAACTCAAAAGTTCTCCTCC
TTATGGTGAAAATCCCCACAGAAAGCCTGCTTTTATGTTGAAAAAATTCT
TGCCGAGGTTAATGCTGGTGGTATTGCTACCGCTATTCCCCCCCCTGGGA
AAGGAAAAGGCCCAATACCAACCATTTAGAACCTGAAGGCGCTTGGAATT
GCGCTACCAAATTTTAAAAAACCCACTTTGTGGTATTTGAAAACCAAAAA
AATCCCCGGGGGGGAACCTTCCCGTGATGAAATTCCTTGAGGGCCTAAAA
CCCGGGGCCGGGAAAACCCAAACCCCTTTTATTGGCCTTTGGGGGGGATT
TGGG
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