DY260098

Overview
NameDY260098
Unique NameDY260098
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length971
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM2_MACFA (Phosphomannomutase 2 OS=Macaca fascicularis GN=PMM2 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 3.447e-73
Identity = 135/220 (61.36%), Postives = 168/220 (76.36%), Query Frame = 2
Query:  176 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            L LFDVDGTLTAPR+  T +M +F+++LR+ + +GVVGGSD  K+ EQLG  V+++YDYVF ENGLVA+KDGKL+  Q+++S LG   +++ IN+ L YIA + +P KRGTFIEFR+GMLN+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   LTFSIGGQISFDVFP GWDK YCLR+   D +   +FFGDKT  GGNDHEIF   R V
Sbjct:    8 LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCKQNIQSHLGEALIQDLINYCLSYIAKVKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTV 227          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM2_HUMAN (Phosphomannomutase 2 OS=Homo sapiens GN=PMM2 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 5.880e-73
Identity = 134/218 (61.47%), Postives = 167/218 (76.61%), Query Frame = 2
Query:  176 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQR 823
            L LFDVDGTLTAPR+  T +M +F+++LR+ + +GVVGGSD  K+ EQLG  V+++YDYVF ENGLVA+KDGKL+  Q+++S LG   +++ IN+ L YIA + +P KRGTFIEFR+GMLN+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   LTFSIGGQISFDVFP GWDK YCLR+   D +   +FFGDKT  GGNDHEIF   R
Sbjct:    8 LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPR 225          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM2_MOUSE (Phosphomannomutase 2 OS=Mus musculus GN=Pmm2 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.490e-70
Identity = 130/220 (59.09%), Postives = 167/220 (75.91%), Query Frame = 2
Query:  176 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPD--DFNETHFFGDKTYKGGNDHEIFESQRPV 829
            L LFD+DGTLTAPR+  T +M  F+++LR+   +GVVGGSD  K+ EQLG  V+++YDYVF ENGLVA+KDGKL+  Q+++  LG + +++ IN+ L YIA++ +P KRGTFIEFR+GMLN+SPIGR+CSQEER EF   DK  +IR K V+ LR++FA   LTFSIGGQIS DVFP+GWDK YCLR+ +   +   +FFGDKT  GGNDHEIF   R V
Sbjct:    4 LCLFDMDGTLTAPRQKITEEMDGFLQKLRQKTKIGVVGGSDFEKLQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCKQNIQGHLGEDVIQDLINYCLSYIANIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKEHIRQKFVADLRKEFAGKGLTFSIGGQISIDVFPEGWDKRYCLRHLEHAGYKTIYFFGDKTMPGGNDHEIFTDPRTV 223          

HSP 2 Score: 22.3274 bits (46), Expect = 1.490e-70
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 3
Query:  834 HTVTPPEDTMEKCKAPSP 887
            +TVT PEDT   C+   P
Sbjct:  225 YTVTAPEDTRRICEGLFP 242          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM2_BOVIN (Phosphomannomutase 2 OS=Bos taurus GN=PMM2 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 6.085e-70
Identity = 132/220 (60.00%), Postives = 162/220 (73.64%), Query Frame = 2
Query:  176 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            L LFDVDGTLTAPR+  T  M  F+++LR+ + +GVVGGSD  K+ EQLG  VI +YDYVF ENGLVA++DGKL+  Q+++  LG   +++ IN+ L YIA + +P KRGTFIEFR+GMLN+SPIGR+CSQEER EF   D+  NIR K V  LR++FA   LTFSIGGQISFDVFP GWDK YCL +   D +   +FFGDKT  GGNDHEIF   R V
Sbjct:    8 LCLFDVDGTLTAPRQKITKDMDCFLQKLRQKIKIGVVGGSDFEKVQEQLGDDVIKKYDYVFPENGLVAYRDGKLLCKQNIQGHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDQKENIRQKFVEDLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLGHVEKDGYKTIYFFGDKTMPGGNDHEIFTDPRTV 227          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_CANAL (Phosphomannomutase OS=Candida albicans GN=PMM1 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 7.947e-70
Identity = 122/220 (55.45%), Postives = 167/220 (75.91%), Query Frame = 2
Query:  176 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPDD--FNETHFFGDKTYKGGNDHEIFESQRPV 829
            L LFDVDGTLT  R   + +M + + +LR+ V +G VGGSDLSK  EQLG  V++++DY FSENGL A+K GK + +QS  +++G EK  + + F L Y++D+D+PI+RGTFIEFR+GM+N+SPIGRN S +ER+++E++DK H+IR  MV  L+++F    LT+SIGGQISFDVFP GWDKTYCL++ +D  F   HFFGDK+YKGGND+EI+   R +
Sbjct:   12 LVLFDVDGTLTPARLTISEEMKKTLEKLREKVVIGFVGGSDLSKQVEQLGPNVLNDFDYCFSENGLTAYKLGKELASQSFINWIGNEKYNKLVKFILRYLSDIDLPIRRGTFIEFRNGMINVSPIGRNASTQERNDYEKFDKQHHIRETMVEALKKEFPDFGLTYSIGGQISFDVFPTGWDKTYCLQHVEDEHFENIHFFGDKSYKGGNDYEIYNDPRTI 231          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_DROME (Probable phosphomannomutase OS=Drosophila melanogaster GN=CG10688 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 1.038e-69
Identity = 126/233 (54.08%), Postives = 170/233 (72.96%), Query Frame = 2
Query:  146 TPMAARKQGLLALFDVDGTLTAPRKAATPQMLEFM-RELRKVVTVGVVGGSDLSKISEQL-GKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYPD---DFNETHFFGDKTYKGGNDHEIFESQRPV 829
            T  A ++  +L LFDVDGTLT PR   TP+  EF    ++   T+G+VGGSDL K+ EQL G+ +++E+D++F ENGLV  + GK +G Q++   LG E +K FINF L Y+++LD+PIKRGTFIEFR+GM+N+ PIGR C++EER+ F  YD  H +R KM+  L+++FA ++LT+SIGGQISFDVFP GWDKTYCLR+ +    F E HFFGDKT  GGND+EI+   R +
Sbjct:    2 TTAALKRDEILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKILNEFDFIFPENGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQCTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLRHIEAHYKFKEIHFFGDKTEPGGNDYEIYSDPRTI 234          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_YEAST (Phosphomannomutase OS=Saccharomyces cerevisiae GN=SEC53 PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.957e-68
Identity = 127/224 (56.70%), Postives = 162/224 (72.32%), Query Frame = 2
Query:  164 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            K   L LFDVDGTLT  R   + ++ + + +LR    +G VGGSDLSK  EQLG  V+DE+DY FSENGL A++ GK + +QS  ++LG EK  +   F L Y++++D+P +RGTF+EFR+GM+N+SPIGRN S EER+EFERYDK H IR K V  L+++F    LTFSIGGQISFDVFP GWDKTYCL++   D F E HFFGDKT  GGND+EIF  +R +
Sbjct:   11 KPETLVLFDVDGTLTPARLTVSEEVRKTLAKLRNKCCIGFVGGSDLSKQLEQLGPNVLDEFDYSFSENGLTAYRLGKELASQSFINWLGEEKYNKLAVFILRYLSEIDLPKRRGTFLEFRNGMINVSPIGRNASTEERNEFERYDKEHQIRAKFVEALKKEFPDYGLTFSIGGQISFDVFPAGWDKTYCLQHVEKDGFKEIHFFGDKTMVGGNDYEIFVDERTI 234          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM1_MOUSE (Phosphomannomutase 1 OS=Mus musculus GN=Pmm1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.505e-64
Identity = 126/229 (55.02%), Postives = 163/229 (71.18%), Query Frame = 2
Query:  155 AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK--TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            A RK+ +L LFDVDGTLT  R+   P++  F+++LR  V +GVVGGSD SKI+EQLG+   VI+++DYVF+ENG V +K G+L+  Q++++ LG E L++ INF L Y+A L +P KRGTFIEFR+GMLN+SPIGR+C+ EER EF   DK   IR K V  L+ +FA   L FS GG ISFDVFP+GWDK YCL     D F+  HFFG++T  GGND EI+   R V
Sbjct:    8 ARRKERILCLFDVDGTLTPARQKIDPEVSAFLQKLRSRVQIGVVGGSDYSKIAEQLGEGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNVSPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDEDSFDIIHFFGNETSPGGNDFEIYADPRTV 236          

HSP 2 Score: 23.0978 bits (48), Expect = 2.505e-64
Identity = 6/14 (42.86%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  834 HTVTPPEDTMEKCK 875
            H+V  P+DT+++C+
Sbjct:  238 HSVVSPQDTVQRCR 251          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM1_HUMAN (Phosphomannomutase 1 OS=Homo sapiens GN=PMM1 PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 3.267e-64
Identity = 127/229 (55.46%), Postives = 161/229 (70.31%), Query Frame = 2
Query:  155 AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK--TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIFESQRPV 829
            A RK+ +L LFDVDGTLT  R+   P++  F+++LR  V +GVVGGSD  KI+EQLG    VI+++DYVF+ENG V +K G+L+  Q++++ LG E L++ INF L Y+A L +P KRGTFIEFR+GMLNISPIGR+C+ EER EF   DK   IR K V  L+ +FA   L FS GG ISFDVFP+GWDK YCL     D F+  HFFG++T  GGND EIF   R V
Sbjct:    8 ARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTV 236          

HSP 2 Score: 23.0978 bits (48), Expect = 3.267e-64
Identity = 6/14 (42.86%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  834 HTVTPPEDTMEKCK 875
            H+V  P+DT+++C+
Sbjct:  238 HSVVSPQDTVQRCR 251          
BLAST of DY260098 vs. ExPASy Swiss-Prot
Match: PMM_ENCCU (Phosphomannomutase OS=Encephalitozoon cuniculi GN=SEC53 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.077e-58
Identity = 111/220 (50.45%), Postives = 150/220 (68.18%), Query Frame = 2
Query:  158 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRY--PDDFNETHFFGDKTYKGGNDHEIF 811
            AR +  + LFDVDGTL+  R     +M + +  LR+ V +G VGGSDL+K  EQ+G  +++ +DY F ENG+  +K+G L   + +   LG E  KEF NF L Y++D+D+PIKRG FIE+R+ M+NISPIGRNCS+EER +F   DK    R KMV+ +R++F    L FSIGGQIS D FP+GWDKTYCLR+   +     +FFGD T +GGND+EI+
Sbjct:    2 ARDEKTIFLFDVDGTLSESRAKMPEKMGKMLESLRRKVRIGFVGGSDLAKQKEQVGDNILEIFDYGFPENGVSFYKNGTLESQEKIIDVLGEEFYKEFANFVLRYLSDIDLPIKRGNFIEYRNSMINISPIGRNCSREERMKFFELDKKEKFREKMVTAMRDRFKDSCLVFSIGGQISIDCFPKGWDKTYCLRHIKKEGVENVYFFGDMTMEGGNDYEIY 221          
The following BLAST results are available for this feature:
BLAST of DY260098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PMM2_MACFA3.447e-7361.36Phosphomannomutase 2 OS=Macaca fascicularis GN=PMM... [more]
PMM2_HUMAN5.880e-7361.47Phosphomannomutase 2 OS=Homo sapiens GN=PMM2 PE=1 ... [more]
PMM2_MOUSE1.490e-7059.09Phosphomannomutase 2 OS=Mus musculus GN=Pmm2 PE=2 ... [more]
PMM2_BOVIN6.085e-7060.00Phosphomannomutase 2 OS=Bos taurus GN=PMM2 PE=2 SV... [more]
PMM_CANAL7.947e-7055.45Phosphomannomutase OS=Candida albicans GN=PMM1 PE=... [more]
PMM_DROME1.038e-6954.08Probable phosphomannomutase OS=Drosophila melanoga... [more]
PMM_YEAST1.957e-6856.70Phosphomannomutase OS=Saccharomyces cerevisiae GN=... [more]
PMM1_MOUSE2.505e-6455.02Phosphomannomutase 1 OS=Mus musculus GN=Pmm1 PE=2 ... [more]
PMM1_HUMAN3.267e-6455.46Phosphomannomutase 1 OS=Homo sapiens GN=PMM1 PE=1 ... [more]
PMM_ENCCU1.077e-5850.45Phosphomannomutase OS=Encephalitozoon cuniculi GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260098 ID=DY260098; Name=DY260098; organism=Citrus clementina; type=EST; length=971bp
CAATTACTTCCCCGTAACTTCCCAGCTTCCGCCATTCAAGATTTCAAGAT
CAAGATCTGCTTTAAATTCCGCGTCCAAATTCAAAGCTCTGCCCTCCACT
CCCGCTATTCCTTCCCTTCTATTCCGATAAATCCATACATTTCAAACTCC
AATGGCTGCTAGGAAGCAAGGTTTATTAGCTCTCTTTGATGTTGACGGAA
CTCTCACGGCTCCGAGAAAGGCGGCAACACCACAAATGTTAGAGTTCATG
CGGGAACTGAGAAAGGTTGTTACAGTTGGAGTCGTCGGTGGATCTGATCT
TTCTAAGATATCAGAGCAGCTTGGGAAGACAGTTATTGATGAATACGATT
ATGTGTTTTCTGAGAATGGTCTTGTGGCTCATAAGGATGGGAAATTAATT
GGCACACAGAGCTTGAAATCATTTCTTGGAGGCGAAAAGCTCAAGGAATT
CATAAATTTTACTCTTCATTACATTGCTGACTTGGACATTCCAATTAAAA
GGGGAACTTTCATTGAATTCCGAAGTGGGATGCTTAATATTTCACCAATT
GGGCGAAACTGCAGCCAAGAAGAAAGGGACGAGTTTGAGAGGTATGACAA
GATTCACAATATACGGCCAAAAATGGTATCTGTGCTTCGGGAGAAGTTTG
CTCACCTTAACTTGACATTTTCCATTGGAGGACAGATAAGCTTTGATGTG
TTTCCCCAGGGATGGGACAAGACATACTGCTTGAGATACCCTGATGACTT
CAATGAAACCCACTTTTTTGGGGACAAAACCTACAAGGGAGGGAATGATC
ATGAAATTTTTGAATCCCAGCGACCAGTGGGTCCACACAGTTACCCCCCC
TGAGGATACTATGGAAAAATGTAAGGCTCCCTCCCCGGCTAAACCCTGGA
ATTTGGGAAAAATTATAATAGTCCACCAAACCCCAAAAAAAAATTTCCTA
TTTCTAATGCCAACCAATTCA
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