DY260113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC_DROME (V-type proton ATPase subunit C OS=Drosophila melanogaster GN=Vha44 PE=1 SV=5) HSP 1 Score: 105.531 bits (262), Expect = 6.298e-22 Identity = 60/145 (41.38%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 336 YLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQVLPAIV*GK*ICPFTCPTILDVLQTIFKIPAREK 767 YLTRF WD AKYP LR I D I + +I+ DLK + YNN++ L + +K++GSL R+L++LVK E I+ SE+L TLL +VPK DWL +YE +T+ P+ I C F T+ + FK+ ARE+ Sbjct: 550 YLTRFQWDMAKYPIKQSLRNIADIISKQIGQIDGDLKTKSQAYNNLKGNLQNLEKKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLTNYEKITDMIVPRSSQLIQEDADYCLFNV-TLFKKVAEEFKLHARER 693
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC_YEAST (V-type proton ATPase subunit C OS=Saccharomyces cerevisiae GN=VMA5 PE=1 SV=4) HSP 1 Score: 94.7449 bits (234), Expect = 1.854e-19 Identity = 54/177 (30.51%), Postives = 94/177 (53.11%), Query Frame = 3 Query: 150 FNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTNYGGPQVLPA 677 F IP ++G+ K ++ + + KI ++ L S +L ++ +PV YL F W K+ +++++ I ++++ D++ A YN+ ++ L A RK++G L+VR L ++VKPED ++ SEHL T+L VPK + D+ SYETL+ V+PA Sbjct: 48 FKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSK----NVVPA 220 HSP 2 Score: 23.0978 bits (48), Expect = 1.854e-19 Identity = 13/38 (34.21%), Postives = 20/38 (52.63%), Query Frame = 1 Query: 655 VVPRSSQLLYEENEYAPLPVPLFWTCCKQFSKYLPGKK 768 VVP S+ ++ E+ EY V LF ++F+ KK Sbjct: 217 VVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKK 254
BLAST of DY260113 vs. ExPASy Swiss-Prot
Match: VATC_SCHPO (V-type proton ATPase subunit C OS=Schizosaccharomyces pombe GN=SPAPB2B4.05 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.652e-12 Identity = 51/209 (24.40%), Postives = 103/209 (49.28%), Query Frame = 3 Query: 42 SRYWVVSLPVQN-SAASVWNRLQEQI--SKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSG--IESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTN 650 S +W++S+P + S A + + ++ + S + + F++P +V + K ++ S KI I+ S ++ + D P++ Y++ F W+ +++ + EI D I + + E+D++ R + S + +KQSG+L+ + L+N+V ED++ S++L + VP +K +L SYETLT+ Sbjct: 4 SDFWILSVPSRGGSNADLCDDIERLLVSGSTSLISTVAPFDVPPFKVESLDVLISQSEQLTKQDAQCASAISKISDIIKNTVSSSSGDLKDYFMVQDKSPLE-YVSSFAWNSSRFHMNKTISEISDRITSEIISFENDIRTRQTSFQQASSAFQNMQKKQSGNLSQKSLANIVHEEDVVHGSDYLTNVFIAVPLNLEKQFLNSYETLTD 211 The following BLAST results are available for this feature:
BLAST of DY260113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260113 ID=DY260113; Name=DY260113; organism=Citrus clementina; type=EST; length=1192bpback to top |