DY260114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH601_RHOS4 (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=groL1 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 4.603e-12 Identity = 56/163 (34.36%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLC---KACIGHEKLLQWRFTMENLQ-DFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXX-EGVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVVSKLLEGSKPKPLG 588 LG A+KI+++KD T I+ KA I ++ Q R +E D+ +E K + AVI+V G + EV+E+KDR EG+V ++L+ K LD L N Q G+ ++ ALE + IA +AGVDGSVV+ + S K G Sbjct: 317 LGRAKKISINKDNTTIVDGNGDKAEID-ARVAQIRNQIEETSSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALIQGGKALDGLTGENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESNEKSFG 478 HSP 2 Score: 32.7278 bits (73), Expect = 4.603e-12 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L+DIA T Q Sbjct: 264 VNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQ 299
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH604_BRASB (60 kDa chaperonin 4 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL4 PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.603e-12 Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILL-------CKACIGHEKLLQWRFTMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSV-VSKLLE 564 LG A+K+ + K+ T I+ +A + K T + ++ +E K + AVI+V G+ + EV+E+KDR E G++ ++LL A ++L L+T N QK GV+ ++ AL IA +AG DGSV V K+LE Sbjct: 317 LGRAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRASEQLKGLRTKNEDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILE 471 HSP 2 Score: 33.113 bits (74), Expect = 4.603e-12 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS*Q 109 +N + K +K PGFG+ RKA L+DIA T Q Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQ 299
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_GEOSM (60 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groL PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.603e-12 Identity = 55/160 (34.38%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFPEESCTKHSYL----AAVIKVCGSNKAEVREKKDRXXXXXXXXXXXX-EGVVSVMSLLY--ACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVVSKLLEGSK 573 LG A+KITV KD T I+ G E +Q R M E D+ E + AVIKV + + E++EKK R EG+V + Y A K L+ LQ A Q+ GV I+ ALE + I+ +AGVDGS+V ++ K Sbjct: 317 LGQAKKITVDKDNTTII---DGFGAEADIQGRVKMIRAQIDETSSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVDEGIVPGGGVAYLRAMKVLENLQLAPE-QQFGVNVIKRALEEPIRQISQNAGVDGSIVVDKVKNGK 472 HSP 2 Score: 35.039 bits (79), Expect = 4.603e-12 Identity = 18/33 (54.55%), Postives = 20/33 (60.61%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 L GVL C +K PGFG+ RKA L DIA T Sbjct: 267 LRGVLNV---CAVKAPGFGDRRKAMLEDIAILT 296
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 4.603e-12 Identity = 52/158 (32.91%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDR-XXXXXXXXXXXXEGVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 LG A+K+ + K+ T I+ G +K ++ R T E D+ +E K + AVI+V G+ + EV+E+KDR EG++ ++LL A K LD ++ N QK GV ++ A+++ I +AG DGS VV KLLE Sbjct: 317 LGRAKKVVIDKENTTIV---DGAGRKKDIEARVTQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRALKALDAVKPDNPDQKAGVDIVRRAIQVPARQIIQNAGEDGSLVVGKLLE 471 HSP 2 Score: 32.3426 bits (72), Expect = 4.603e-12 Identity = 15/33 (45.45%), Postives = 19/33 (57.58%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K +K PGFG+ RKA L DIA T Sbjct: 264 VNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILT 296
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 4.604e-12 Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLC---KACIGHEKLLQWRFTMENL-----QDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDR-XXXXXXXXXXXXEGVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLEG 567 LG A+K+ + KD T I+ KA I ++ Q R +E ++ +E K + AVI+V G+ + EV+E+KDR EG++ ++LL A K LD L+ AN Q+ G+ ++ AL IA +AG DG+ +V KLLEG Sbjct: 317 LGRAKKVIIDKDNTTIVDGAGNKADID-ARVSQIRAQIETTTSDYDREKLQERVAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKSLDGLKAANDDQQSGIDIVRRALRAPARQIAENAGEDGAYIVGKLLEG 472 HSP 2 Score: 32.3426 bits (72), Expect = 4.604e-12 Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFTS 103 +N + K +K PGFG+ RKA L D+A T+ Sbjct: 264 VNKLRGGLKVAAVKAPGFGDRRKAMLEDVAILTA 297
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH602_MESSB (60 kDa chaperonin 2 OS=Mesorhizobium sp. (strain BNC1) GN=groL2 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 5.049e-12 Identity = 45/152 (29.61%), Postives = 75/152 (49.34%), Query Frame = 1 Query: 133 LGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVV 549 LG A+K+ + K+ T I+ G + +Q R E D+ +E K + AVI+V G+ + EV+E+KDR E G++ ++LL A K LD + N QK+G+ ++ A+E + IA +AG +GS++ Sbjct: 317 LGRAKKVVIEKENTTIV---DGAGSKDEIQGRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGLLPGGGVALLRAAKALDNVTGENEDQKVGISIVRRAIEAPIRQIAENAGAEGSII 465 HSP 2 Score: 32.7278 bits (73), Expect = 5.049e-12 Identity = 15/33 (45.45%), Postives = 20/33 (60.61%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K +K PGFG+ RKA L+DIA T Sbjct: 264 VNKLRGGLKVAAVKAPGFGDRRKAMLQDIAILT 296 HSP 3 Score: 21.1718 bits (43), Expect = 5.049e-12 Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 605 DMLMPEIVFPLKTIRAVLVEATS 673 D+ ++ P+K +RA L +A S Sbjct: 488 DLYQMGVIDPVKVVRAALQDAAS 510
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60C_DROME (60 kDa heat shock protein homolog 2, mitochondrial OS=Drosophila melanogaster GN=Hsp60C PE=2 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 5.967e-12 Identity = 55/180 (30.56%), Postives = 90/180 (50.00%), Query Frame = 1 Query: 112 KDFECVSLGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTMENLQDFPEESCTKH------------SYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGSVV---SKLLEGSKPKPLGKGE 597 +D + G ++ VSKD T++L K G + ++ R +E L++ +ES + + S A+++V GS+ EV EKKDR E G+V +LL ++L+ L+ AN Q +G++ I+ AL M IA +AGVDG++V ++L+G KGE Sbjct: 335 EDIKMSDFGRVGEVVVSKDDTMLLKGK---GQKAEVEKR--VEGLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGE 509 HSP 2 Score: 32.7278 bits (73), Expect = 5.967e-12 Identity = 13/33 (39.39%), Postives = 21/33 (63.64%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + + C +K PGFG++RK +L D+A T Sbjct: 288 VNRLKVGLQVCAVKAPGFGDNRKENLMDMAVAT 320
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_CHICK (60 kDa heat shock protein, mitochondrial OS=Gallus gallus GN=HSPD1 PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 5.968e-12 Identity = 54/167 (32.34%), Postives = 82/167 (49.10%), Query Frame = 1 Query: 112 KDFECVSLGHAEKITVSKDQTVILLCKACIGHEKLLQWRF----------TMENLQDFPEESCTKHSYLAAVIKVCGSNKAEVREKKDRXXXXXXXXXXXXE-GVV--SVMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLEGS 570 +D + G ++ V+KD T++L K G + ++ R T E ++ E K S AV+KV G++ EV EKKDR E G+V +LL LD L+ AN QKIG++ I+ L++ IA +AGV+GS +V K+L+ S Sbjct: 335 EDIQPHDFGKVGEVIVTKDDTMLLKGK---GEKAQIEKRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVPGGGCALLRCIPALDALKPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKILQSS 498 HSP 2 Score: 30.0314 bits (66), Expect = 5.968e-12 Identity = 12/30 (40.00%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIA 91 LN + + +K PGFG++RK L+D+A Sbjct: 288 LNRLKVGLQVVAVKAPGFGDNRKNQLKDMA 317
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_RICCN (60 kDa chaperonin OS=Rickettsia conorii GN=groL PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.975e-12 Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 130 SLGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDR-XXXXXXXXXXXXEGVVS--VMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 SLG A+++T+SK+ TVI+ G +K ++ R E D+ +E K S AV+KV G+ + EV+E+KDR EGVV+ ++LL+A + L KL+ N Q+ G++ + AL+ + I +AG +G VV KLLE Sbjct: 316 SLGTAKRVTISKENTVIVDGN---GDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLE 471 HSP 2 Score: 31.5722 bits (70), Expect = 5.975e-12 Identity = 14/33 (42.42%), Postives = 19/33 (57.58%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K +K PGFG+ RKA + DIA T Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILT 296
BLAST of DY260114 vs. ExPASy Swiss-Prot
Match: CH60_RICAH (60 kDa chaperonin OS=Rickettsia akari (strain Hartford) GN=groL PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.975e-12 Identity = 55/159 (34.59%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 130 SLGHAEKITVSKDQTVILLCKACIGHEKLLQWRFTM------ENLQDFP----EESCTKHSYLAAVIKVCGSNKAEVREKKDR-XXXXXXXXXXXXEGVVS--VMSLLYACKELDKLQTANHGQKIGVQAIQYALEMLVSAIAYSAGVDGS-VVSKLLE 564 SLG A+++TVSK+ TVI+ G +K ++ R E D+ +E K S AV+KV G+ + EV+E+KDR EGVV+ ++LL+A + L KL+ N Q+ G++ + AL+ + I +AG +G VV KLLE Sbjct: 316 SLGTAKRVTVSKENTVIV---DGSGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQTLTKLKVENKDQQAGIEIVIEALKDPLKQIIENAGENGGVVVGKLLE 471 HSP 2 Score: 31.5722 bits (70), Expect = 5.975e-12 Identity = 14/33 (42.42%), Postives = 19/33 (57.58%), Query Frame = 2 Query: 2 LNGVLTATKACVIKPPGFGESRKASLRDIAKFT 100 +N + K +K PGFG+ RKA + DIA T Sbjct: 264 VNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILT 296 The following BLAST results are available for this feature:
BLAST of DY260114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260114 ID=DY260114; Name=DY260114; organism=Citrus clementina; type=EST; length=980bpback to top |